CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007786_P001	Maize	nucleus	82.97	70.83
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	67.76	70.82
EER90726	Sorghum	cytosol	66.97	69.49
OQU91198	Sorghum	nucleus	51.31	60.83
TraesCS2B01G195200.2	Wheat	nucleus	68.33	59.72
TraesCS2D01G176500.1	Wheat	golgi, unclear	70.26	59.69
TraesCS2A01G168900.1	Wheat	cytosol	70.03	59.5
OQU91197	Sorghum	plastid	58.57	58.37
Os07t0188000-01	Rice	nucleus	65.38	54.75
CDX71410	Canola	nucleus	58.46	54.1
CDY04517	Canola	plastid	58.12	53.5
Bra011993.1-P	Field mustard	plastid	58.23	53.11
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	61.75	52.71
KRH25139	Soybean	plastid	57.21	52.45
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	50.4	52.17
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	58.12	51.35
KRH30536	Soybean	plastid	51.65	51.12
KXG20286	Sorghum	cytosol	54.6	49.03
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	55.73	47.9
Solyc06g074730.2.1	Tomato	nucleus	54.37	47.38
OQU82149	Sorghum	nucleus	56.87	46.52
KXG20965	Sorghum	nucleus	54.37	45.71
EES18841	Sorghum	nucleus	56.53	44.91
OQU86027	Sorghum	plastid	52.1	41.58
EER97198	Sorghum	nucleus	44.95	37.93
EER91156	Sorghum	nucleus	38.48	36.26
KXG23356	Sorghum	nucleus	34.28	34.28
EES00570	Sorghum	nucleus	33.83	33.18
OQU86696	Sorghum	nucleus	33.6	32.89
EER93271	Sorghum	cytosol	37.68	32.81
EES18816	Sorghum	nucleus	33.71	32.67
EER92100	Sorghum	cytosol	35.19	30.01
KXG27113	Sorghum	nucleus	32.35	26.1
OQU89939	Sorghum	endoplasmic reticulum, plasma membrane	22.93	20.06

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A1W0W2J7	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	EnsemblPlants:OQU88608	ProteinID:OQU88608	ProteinID:OQU88608.1	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	EnsemblPlantsGene:SORBI_3002G061800
SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0009DC8A4E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:5982991..5990586

Molecular Weight (calculated)

98066.8 Da

IEP (calculated)

9.435

GRAVY (calculated)

-0.306

Length

881 amino acids

Sequence
(BLAST)

001: MGRLAVADNP APPAPAAGRS EAQGPAHRPP PPPLSSKGIT PPARPGFGTL GRKLIVRANH FAVQVADNDI CHYDVLINPE PKARRTNRVI LSELLKVHGA
101: TSLAHKIPAY DGSKSLYTAG ELPFKSMEFV VKLGRREIEY KVTIRYAAQP NLYHLQQFLK GQQRDAPYDT IQALDVALRE SPSLNYVTLS RSFFSKKFDN
201: GVDIGGGLES WSGYYQSLRP TQMGLSLNID ICSTSFYQSI PVVKFVDDCL GLTNPAQPFS DRDRLKLKKA LRGVRVETTH QQGKKSAYKI TGITPVPLAQ
301: LSFSCNEGPQ LTVVQYFAER YNYRLRYTAW PCLQSGNDSK PIYLPMEVCQ IIEGQRYPRK LSDTQVTNIL KATCKRPQER EGSIIQMVHR NNYSADKMAQ
401: VFGITVANQM ANVQARVLPA PMLKYHESGR EKTVAPSLGQ WNMINKKMVN GGTVHSWTCL SFSRIQLHIV DRICEDLAQM CNSIGMDFNP RPVTEVQSAS
501: PNHIEAALRD VHMRAPNLQL LIVVLPDVSG HYGKIKRICE TDLGIVSQCI NPKKNKNKQY FENVALKINV KVGGRNTVLE RAFVPNGIPF VSDVPTIIFG
601: ADVTHPTAGE DSSASIAAVV ASMDWPQVTT YKALVSAQAH REEIIQNLFW TGTDPEKGTP VNGGMIRELL TSFFKRTGRK PKRIIFYRDG VSEGQFSHVL
701: LHEMDAIRKA CASMEDGYLP PVTFVVVQKR HHTRLFPEVH GRRDLTDKSG NILPGTVVDT SICHPSEFDF YLCSHAGIKG TSRPTHYHVL YDENRFSADA
801: LQFLTNNLCY TYARCTRAVS VVPPAYYAHL AAFRARYYDE QESTDGTSVV SGSAATAGGG PPAFRRLPQI KENVKEVMFF C

Best Arabidopsis Sequence Match ( AT2G27880.1 )
(BLAST)

001: MSNRGGGGHG GASRGRGGGR RSDQRQDQSS GQVAWPGLQQ SYGGRGGSVS AGRGRGNVGR GENTGDLTAT QVPVASAVSG GRGRGNIGDP TFSVASSSKT
101: VSVASSSKEE SKNTEVSETM SNLQITSTET KPEMTSLPPA SSKAVTFPVR PGRGTLGKKV MVRANHFLVQ VADRDLYHYD VSINPEVISK TVNRNVMKLL
201: VKNYKDSHLG GKSPAYDGRK SLYTAGPLPF DSKEFVVNLA EKRADGSSGK DRPFKVAVKN VTSTDLYQLQ QFLDRKQREA PYDTIQVLDV VLRDKPSNDY
301: VSVGRSFFHT SLGKDARDGR GELGDGIEYW RGYFQSLRLT QMGLSLNIDV SARSFYEPIV VTDFISKFLN IRDLNRPLRD SDRLKVKKVL RTLKVKLLHW
401: NGTKSAKISG ISSLPIRELR FTLEDKSEKT VVQYFAEKYN YRVKYQALPA IQTGSDTRPV YLPMELCQID EGQRYTKRLN EKQVTALLKA TCQRPPDREN
501: SIKNLVVKNN YNDDLSKEFG MSVTTQLASI EARVLPPPML KYHDSGKEKM VNPRLGQWNM IDKKMVNGAK VTSWTCVSFS TRIDRGLPQE FCKQLIGMCV
601: SKGMEFKPQP AIPFISCPPE HIEEALLDIH KRAPGLQLLI VILPDVTGSY GKIKRICETE LGIVSQCCQP RQVNKLNKQY MENVALKINV KTGGRNTVLN
701: DAIRRNIPLI TDRPTIIMGA DVTHPQPGED SSPSIAAVVA SMDWPEINKY RGLVSAQAHR EEIIQDLYKL VQDPQRGLVH SGLIREHFIA FRRATGQIPQ
801: RIIFYRDGVS EGQFSQVLLH EMTAIRKACN SLQENYVPRV TFVIVQKRHH TRLFPEQHGN RDMTDKSGNI QPGTVVDTKI CHPNEFDFYL NSHAGIQGTS
901: RPAHYHVLLD ENGFTADQLQ MLTNNLCYTY ARCTKSVSIV PPAYYAHLAA FRARYYMESE MSDGGSSRSR SSTTGVGQVI SQLPAIKDNV KEVMFYC

Arabidopsis Description

AGO5Protein argonaute 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJK3]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.