Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044183_P001 | Maize | cytosol | 15.88 | 94.48 |
| Zm00001d037833_P001 | Maize | mitochondrion | 21.63 | 93.95 |
| Zm00001d026111_P014 | Maize | nucleus | 94.43 | 92.88 |
| Zm00001d002650_P003 | Maize | nucleus | 97.03 | 92.81 |
| Os04t0566500-04 | Rice | nucleus | 92.94 | 90.92 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 92.01 | 90.17 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 91.92 | 89.84 |
| KRG99173 | Soybean | cytosol | 13.0 | 89.74 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 91.83 | 88.3 |
| EES18841 | Sorghum | nucleus | 87.56 | 85.03 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 58.77 | 81.47 |
| TraesCSU01G065300.1 | Wheat | nucleus | 89.6 | 80.96 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 89.51 | 79.67 |
| Solyc06g072300.2.1 | Tomato | nucleus | 77.9 | 79.6 |
| PGSC0003DMT400069313 | Potato | cytosol | 77.81 | 79.51 |
| Solyc03g098280.2.1 | Tomato | nucleus | 72.05 | 79.18 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 88.95 | 79.17 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 70.19 | 77.14 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 77.62 | 77.05 |
| CDY41831 | Canola | nucleus | 74.28 | 76.63 |
| AT1G48410.2 | Thale cress | nucleus | 74.65 | 76.57 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 86.44 | 76.5 |
| CDY68174 | Canola | nucleus | 74.65 | 76.43 |
| Bra014136.1-P | Field mustard | nucleus | 75.02 | 74.88 |
| PGSC0003DMT400079716 | Potato | nucleus | 76.6 | 73.2 |
| KXG20965 | Sorghum | nucleus | 70.84 | 72.81 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 16.71 | 72.58 |
| Bra032254.1-P | Field mustard | nucleus | 74.19 | 71.92 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 72.42 | 71.82 |
| KXG20286 | Sorghum | cytosol | 63.14 | 69.32 |
| OQU86027 | Sorghum | plastid | 66.67 | 65.04 |
| EER90726 | Sorghum | cytosol | 48.93 | 62.07 |
| OQU91198 | Sorghum | nucleus | 40.76 | 59.08 |
| OQU91197 | Sorghum | plastid | 47.63 | 58.03 |
| OQU88608 | Sorghum | plastid | 46.52 | 56.87 |
| EER97198 | Sorghum | nucleus | 46.43 | 47.89 |
| EER91156 | Sorghum | nucleus | 38.9 | 44.81 |
| KXG23356 | Sorghum | nucleus | 30.27 | 37.0 |
| EES18816 | Sorghum | nucleus | 30.55 | 36.19 |
| EES00570 | Sorghum | nucleus | 30.18 | 36.19 |
| OQU86696 | Sorghum | nucleus | 29.62 | 35.44 |
| EER92100 | Sorghum | cytosol | 32.96 | 34.37 |
| EER93271 | Sorghum | cytosol | 29.8 | 31.72 |
| KXG27113 | Sorghum | nucleus | 29.53 | 29.12 |
| OQU89939 | Sorghum | endoplasmic reticulum, plasma membrane | 22.56 | 24.13 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | UniProt:A0A1Z5RF01 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | EnsemblPlants:OQU82149 | ProteinID:OQU82149 | ProteinID:OQU82149.1 |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 |
| PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 |
| PANTHER:PTHR22891:SF102 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 |
| SMART:SM01163 | EnsemblPlantsGene:SORBI_3006G181000 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI000B426A4A | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:-:53559399..53569903
Molecular Weight (calculated)
119331.0 Da
IEP (calculated)
9.862
GRAVY (calculated)
-0.515
Length
1077 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKKRTGPG GSGETSGESS GGSGQGSSQR PERTQQPGGG RGWVPQQGGR GGGQHQGRGG HYQGRGGPGS HHPGGGPPEY HPREYQGRGG EYQGRGGEYQ
0101: GRGGARSRGG MPQPYYGGHR GGNVGRNVPP GPSRTVPELH QAPYVQYQAP VVSQSPSGPG SSSQPVAEVS SGQVQQQFQQ LAIRGQSSTS QEIQVAPASS
0201: KSVRFPLRPG KGTYGDRCIV KANHFFAELP DKDLHQYDVS ITPEVTSRGV NRAVMGELVR LYRISHLGGR LPAYDGRKSL YTAGPLPFTS MTFEITLQDE
0301: EDSLGGGQGG QRRERVFRVV IKFAARADLH HLAMFLAGRQ ADAPQEALQV LDIVLRELPT ARYSPVGRSF YSPNLGRRQQ LGEGLESWRG FYQSIRPTQM
0401: GLSLNIDMSS TAFIEPLPVI DFVAQLLNRD ISVRPLSDSD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TSQATRELSF PVDDRGTVKT VVQYFMETYG
0501: FSIQHTTLPC LQVGNQQRPN YLPMEVCKIV EGQRYSKRLN EKQITALLKV TCQRPQEREL DILQTVHHNA YYEDPYAQEF GIRIDERLAA VEARVLPPPR
0601: LKYHDSGREK DVLPRVGQWN MMNKKMVNGG RVSNWACINF SRNVQDSAAR GFCHELAVMC QISGMDFALE PVLAPVTARP EHVERALKAR YQDAMNVLRP
0701: QGRELDLLIV ILPDNNGSLY GDLKRICETD LGLVSQCCLT KHVFKMSKQY LANVALKINV KVGGRNTVLV DALTRRIPLV SDRPTIIFGA DVTHPHPGED
0801: SSPSIAAVVA SQDWPEVTKY AGLVSAQAHR QELIQDLFKV WQDPQRRTVT GGMIKELLIS FKRATGQKPQ RIIFYRDGVS EGQFYQVLLY ELDAIRKACA
0901: SLEPNYQPPV TFVVVQKRHH TRLFANNHND QRTVDRSGNI LPGTVVDSKI CHPTEFDFYL CSHAGIQGTS RPAHYHVLWD ENKFTADELQ TLTNNLCYTY
1001: ARCTRSVSIV PPAYYAHLAA FRARFYMEPD TSDSGSMASG ARGPPPGGAR GIRGAGSVAV RPLPALKENV KRVMFYC
0101: GRGGARSRGG MPQPYYGGHR GGNVGRNVPP GPSRTVPELH QAPYVQYQAP VVSQSPSGPG SSSQPVAEVS SGQVQQQFQQ LAIRGQSSTS QEIQVAPASS
0201: KSVRFPLRPG KGTYGDRCIV KANHFFAELP DKDLHQYDVS ITPEVTSRGV NRAVMGELVR LYRISHLGGR LPAYDGRKSL YTAGPLPFTS MTFEITLQDE
0301: EDSLGGGQGG QRRERVFRVV IKFAARADLH HLAMFLAGRQ ADAPQEALQV LDIVLRELPT ARYSPVGRSF YSPNLGRRQQ LGEGLESWRG FYQSIRPTQM
0401: GLSLNIDMSS TAFIEPLPVI DFVAQLLNRD ISVRPLSDSD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TSQATRELSF PVDDRGTVKT VVQYFMETYG
0501: FSIQHTTLPC LQVGNQQRPN YLPMEVCKIV EGQRYSKRLN EKQITALLKV TCQRPQEREL DILQTVHHNA YYEDPYAQEF GIRIDERLAA VEARVLPPPR
0601: LKYHDSGREK DVLPRVGQWN MMNKKMVNGG RVSNWACINF SRNVQDSAAR GFCHELAVMC QISGMDFALE PVLAPVTARP EHVERALKAR YQDAMNVLRP
0701: QGRELDLLIV ILPDNNGSLY GDLKRICETD LGLVSQCCLT KHVFKMSKQY LANVALKINV KVGGRNTVLV DALTRRIPLV SDRPTIIFGA DVTHPHPGED
0801: SSPSIAAVVA SQDWPEVTKY AGLVSAQAHR QELIQDLFKV WQDPQRRTVT GGMIKELLIS FKRATGQKPQ RIIFYRDGVS EGQFYQVLLY ELDAIRKACA
0901: SLEPNYQPPV TFVVVQKRHH TRLFANNHND QRTVDRSGNI LPGTVVDSKI CHPTEFDFYL CSHAGIQGTS RPAHYHVLWD ENKFTADELQ TLTNNLCYTY
1001: ARCTRSVSIV PPAYYAHLAA FRARFYMEPD TSDSGSMASG ARGPPPGGAR GIRGAGSVAV RPLPALKENV KRVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.