Factsheet for GSMUA_Achr7P04100_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99173	Soybean	cytosol	32.66	51.92
GSMUA_AchrUn_...	Banana	cytosol	27.02	34.18
Zm00001d025331_P002	Maize	cytosol	68.55	30.8
Zm00001d025073_P001	Maize	cytosol	45.56	29.12
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	31.85	22.01
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	64.11	20.46
GSMUA_Achr6P05310_001	Banana	nucleus	69.35	18.53
GSMUA_Achr4P30720_001	Banana	nucleus	68.15	18.11
GSMUA_Achr7P13220_001	Banana	cytosol	67.34	17.65
Solyc03g098280.2.1	Tomato	nucleus	69.35	17.55
GSMUA_Achr3P13970_001	Banana	nucleus	73.79	17.26
GSMUA_AchrUn_...	Banana	cytosol	20.97	17.11
GSMUA_Achr1P17950_001	Banana	nucleus	72.58	17.06
GSMUA_AchrUn_...	Banana	mitochondrion	72.98	17.01
OQU82149	Sorghum	nucleus	72.58	16.71
GSMUA_Achr1P07120_001	Banana	cytosol	70.56	16.56
GSMUA_Achr3P27070_001	Banana	nucleus	71.77	16.54
PGSC0003DMT400069313	Potato	cytosol	70.16	16.51
Solyc06g072300.2.1	Tomato	nucleus	70.16	16.51
AT1G48410.2	Thale cress	nucleus	69.76	16.48
CDY41831	Canola	nucleus	69.35	16.48
Os04t0566500-04	Rice	nucleus	72.98	16.44
TraesCS2D01G400200.1	Wheat	nucleus	72.58	16.38
Os02t0672200-01	Rice	cytosol	71.37	16.36
CDY68174	Canola	nucleus	69.35	16.35
TraesCS2B01G421000.2	Wheat	nucleus	72.58	16.33
VIT_17s0053g00680.t01	Wine grape	nucleus	71.37	16.31
TraesCS6A01G254600.2	Wheat	plastid	70.56	16.13
Zm00001d002650_P003	Maize	nucleus	72.98	16.07
TraesCS2A01G403100.4	Wheat	nucleus	72.58	16.07
CDY04311	Canola	cytosol, nucleus, plastid	63.31	16.02
Bra014136.1-P	Field mustard	nucleus	69.35	15.94
Zm00001d011096_P059	Maize	nucleus	70.97	15.88
TraesCS6B01G270900.1	Wheat	nucleus	69.35	15.85
TraesCS6D01G235900.1	Wheat	endoplasmic reticulum	70.97	15.81
Zm00001d026111_P014	Maize	nucleus	68.15	15.43
Bra032254.1-P	Field mustard	nucleus	68.95	15.39
EES18841	Sorghum	nucleus	68.55	15.33
PGSC0003DMT400079716	Potato	nucleus	68.95	15.17
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	69.35	14.97
TraesCSU01G065300.1	Wheat	nucleus	71.77	14.93
TraesCS7D01G036100.3	Wheat	endoplasmic reticulum, golgi	71.77	14.71
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	71.77	14.71
CDY23683	Canola	cytosol, nucleus, plastid	63.31	14.46
HORVU7Hr1G007000.14	Barley	nucleus	62.1	12.65
GSMUA_Achr6P04510_001	Banana	nucleus	60.89	12.21
GSMUA_Achr9P05150_001	Banana	nucleus	38.71	10.49
GSMUA_Achr9P27810_001	Banana	plastid	34.27	9.76
GSMUA_Achr9P22630_001	Banana	nucleus	35.08	9.71
GSMUA_Achr7P26400_001	Banana	cytosol	22.98	8.95
Zm00001d044183_P001	Maize	cytosol	4.03	5.52
Zm00001d037833_P001	Maize	mitochondrion	4.03	4.03

Protein Annotations

EnsemblPlants:GSMUA_Achr7P04100_001	EnsemblPlants:GSMUA_Achr7T04100_001	EnsemblPlantsGene:GSMUA_Achr7G04100_001	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR003165	InterPro:IPR036397	InterPro:Piwi	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	PFAM:PF02171	PFscan:PS50822	SignalP:SignalP-noTM
SMART:SM00950	SUPFAM:SSF53098	UniParc:UPI000294C86E	UniProt:M0TEK0	MapMan:35.1	:

Description

Protein argonaute 1B [Source:GMGC_GENE;Acc:GSMUA_Achr7G04100_001]

Coordinates

chr7:+:3185209..3186970

Molecular Weight (calculated)

27915.1 Da

IEP (calculated)

8.538

GRAVY (calculated)

0.169

Length

248 amino acids

Sequence
(BLAST)

001: MAKSLIYCLI IMVPFMVCFL SCDVKRICET DIGLVSQCCL AKCVFRMSKQ YLADVALKIN VKVGGRNTVF VDALRFQPSI AVVVASRDWP EVTKYAGLVC
101: AQPHHQELIQ DLFKVWQDPW ITSTGQKPQR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEWNYQPPSG NILAGLLLIL RSATLRSLTS TCAAMPASNR
201: PAHYHILWDE NNFTANALRM VTNNLCYPYA RCTRSVSISS HPSLSFTS

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.