Factsheet for TraesCS7D01G036100.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G065300.1	Wheat	nucleus	96.45	97.9
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	97.52	97.52
TraesCS2D01G400200.1	Wheat	nucleus	83.47	91.9
Zm00001d044183_P001	Maize	cytosol	13.64	91.16
HORVU7Hr1G007000.14	Barley	nucleus	91.57	91.04
Zm00001d037833_P001	Maize	mitochondrion	18.43	89.92
OQU82149	Sorghum	nucleus	79.67	89.51
Os04t0566500-04	Rice	nucleus	81.32	89.37
KRG99173	Soybean	cytosol	11.4	88.46
Zm00001d026111_P014	Maize	nucleus	77.27	85.39
Zm00001d002650_P003	Maize	nucleus	79.17	85.08
EES18841	Sorghum	nucleus	77.19	84.22
Zm00001d011096_P059	Maize	nucleus	75.79	82.76
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	77.44	81.55
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	51.74	80.57
TraesCS7D01G552900.1	Wheat	mitochondrion	29.83	79.34
Solyc06g072300.2.1	Tomato	nucleus	68.43	78.56
PGSC0003DMT400069313	Potato	cytosol	68.35	78.46
Solyc03g098280.2.1	Tomato	nucleus	63.14	77.96
TraesCS7D01G553200.1	Wheat	nucleus, plastid	30.66	77.45
CDY04311	Canola	cytosol, nucleus, plastid	62.48	77.14
CDY41831	Canola	nucleus	65.95	76.44
AT1G48410.2	Thale cress	nucleus	66.28	76.38
CDY68174	Canola	nucleus	66.36	76.33
TraesCS6D01G235900.1	Wheat	endoplasmic reticulum	70.17	76.28
VIT_17s0053g00680.t01	Wine grape	nucleus	68.26	76.13
Bra014136.1-P	Field mustard	nucleus	66.61	74.7
Zm00001d025331_P002	Maize	cytosol	33.22	72.83
Bra032254.1-P	Field mustard	nucleus	66.61	72.55
CDY23683	Canola	cytosol, nucleus, plastid	65.04	72.47
PGSC0003DMT400079716	Potato	nucleus	67.27	72.23
GSMUA_Achr7P04100_001	Banana	extracellular	14.71	71.77
Zm00001d025073_P001	Maize	cytosol	22.89	71.39
TraesCS7D01G351700.1	Wheat	cytosol	55.87	71.01
TraesCS7D01G553000.1	Wheat	cytosol	59.17	69.45
TraesCS6D01G403900.1	Wheat	plastid	60.5	69.38
TraesCS6D01G166300.1	Wheat	plastid	51.65	65.72
TraesCS4D01G024300.1	Wheat	cytosol	28.18	62.0
TraesCS4D01G024100.1	Wheat	plastid	41.9	59.16
TraesCS1D01G151300.3	Wheat	plastid	40.08	57.13
TraesCS5D01G454600.1	Wheat	cytosol	34.88	56.95
TraesCS3D01G118600.1	Wheat	cytosol, mitochondrion, nucleus	37.77	54.4
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	46.12	52.99
TraesCS2D01G176500.1	Wheat	golgi, unclear	44.79	52.27
TraesCS7D01G061600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	20.0	45.92
TraesCS7D01G458800.1	Wheat	nucleus	15.45	40.13
TraesCS5D01G169500.1	Wheat	cytosol	26.78	36.73
TraesCS5D01G192700.2	Wheat	nucleus	27.93	35.84
TraesCS1D01G453600.1	Wheat	nucleus	27.02	35.47
TraesCS7D01G520400.1	Wheat	nucleus	26.45	35.2
TraesCS3D01G191600.5	Wheat	nucleus	26.78	32.34
TraesCS2D01G417000.1	Wheat	nucleus	27.44	31.68
TraesCS2D01G412100.1	Wheat	plastid	28.68	31.07
TraesCS7D01G458900.1	Wheat	mitochondrion	4.21	28.02
TraesCS2D01G416500.1	Wheat	nucleus	23.64	27.06

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaut_Gly-rich	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005515	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF12764	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS7D01G036100	EnsemblPlants:TraesCS7D01G036100.3	TIGR:cd02846	TIGR:cd04657	SEG:seg

Description

No Description!

Coordinates

chr7D:-:18428040..18434397

Molecular Weight (calculated)

133838.0 Da

IEP (calculated)

9.715

GRAVY (calculated)

-0.597

Length

1210 amino acids

Sequence
(BLAST)

0001: MSFCFKLYLR SIFPSLILHN FCNLTFWSIL VLAEPIMVRK KRTGTGESSG EASGAPGQGS SQPAERAPPQ QHQQHGGGRG WVPQQGGRGG GQHLGRGGQY
0101: QGQGGPAAHR PGGPPEYQQR EYQGRGHPGG GPPEYQPRDY QGRGHPGGGP PEYQPRDPQG RGHPGGAPPE YQPRGPQGRG HPGGAPPEYQ PRGPQGRGHP
0201: GGGPPEYQPR DPQGRGHPGG GPPEYQQRDY QGRGGPRPRG GGMPQPSYGG HMGGRGGHNV PPGQSRTVPE LHQAPDVQYQ APVVSPSASG AGSSPQPAAE
0301: VSSGQVEQQF QKLDISDQSS TSQAIQPAPA SSKSVRFPLR PGMGKCGDRC VVKANHFFAE LPDKDLHQYD VTITPEVTSR GVNRAVIAEL VKLYRQSHMN
0401: GRLPAYDGRK SLYTAGPLPF TSRTFEIALQ DEDEGLVGGQ ATPRRERQFR VVIKYAARAD LHHLAMFLAG RQPDAPQEAL QVLDIVLREL PTARYSPVSR
0501: SFYSPNLGRR QRLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEPLP VIEFVAQLLC RDISVRPLTD SDRVKIKKAL RGVKVEVTHR GNMRRKYRIS
0601: GLTSQATREL SFPVDDRGTV KTVVQYFLET YGFNIQHTTL PCLQVGNQQR PNYLPMEVCK IVEGQRYSKR LNEKQITALL KVTCQRPQER EKDILQTVHH
0701: NAYYEDPYAQ EFGIKIDEQL ASVEARVLPP PRLKYHDSGR EKDVLPRVGQ WNMMNKKMVN GGRVGHWACI NFSRNVQDNA AKVFCHELAI MCQISGMNFA
0801: PEPVLPVLSA RPEHVERALK ARYHDAMNAS KPPGKELDLL IVILPDNNGS LYGDLKRICE TELGLVSQCC LTKHVFKMSK QYLANVALKI NVKVGGRNTV
0901: LVDALARRIR LVTDRPTIIF GADVTHPHPG EDSSPSIAAV VASQDWPEIT KYAGLVSAQA HRQELIQDLF KVWQDPQRGT VTGGMIKELL ISFKRATGQK
1001: PQRIIFYRDG VSEGQFYQVL LFELDAIRKA CASLEPNYQP PVTFVVVQKR HHTRLFANNH NDQRTVDRSG NILPGTVVDS KICHPTEFDF YLCSHAGIQG
1101: TSRPAHYHVL WDENKFTADE LQTLTNNLCY TYARCTRSVS IVPPAYYAHL AAFRARFYME PDTSDSGSVA SGARGGPPQG GPRSSTRFGN VAVRPLPALK
1201: ENVKRVMFYC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.