Factsheet for Bra014136.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41831	Canola	nucleus	96.66	99.9
CDY68174	Canola	nucleus	96.94	99.43
Bra032254.1-P	Field mustard	nucleus	94.62	91.9
AT1G48410.2	Thale cress	nucleus	89.06	91.52
Zm00001d044183_P001	Maize	cytosol	13.62	81.22
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	58.29	80.95
Zm00001d037833_P001	Maize	mitochondrion	18.35	79.84
Solyc06g072300.2.1	Tomato	nucleus	76.92	78.75
Solyc03g098280.2.1	Tomato	nucleus	71.45	78.67
PGSC0003DMT400069313	Potato	cytosol	76.64	78.46
KRH38925	Soybean	endoplasmic reticulum	76.74	78.26
KRH09472	Soybean	nucleus	76.0	77.87
VIT_17s0053g00680.t01	Wine grape	nucleus	77.11	76.68
GSMUA_Achr3P13970_001	Banana	nucleus	74.88	76.23
TraesCS7D01G552900.1	Wheat	mitochondrion	31.79	75.38
OQU82149	Sorghum	nucleus	74.88	75.02
GSMUA_AchrUn_...	Banana	cytosol	13.53	74.49
Os04t0566500-04	Rice	nucleus	75.16	73.66
Os02t0672200-01	Rice	cytosol	73.86	73.66
GSMUA_Achr1P17950_001	Banana	nucleus	72.01	73.65
TraesCS2D01G400200.1	Wheat	nucleus	74.7	73.34
TraesCS2B01G421000.2	Wheat	nucleus	74.7	73.14
TraesCS7D01G553200.1	Wheat	nucleus, plastid	32.44	73.07
TraesCSU01G081900.1	Wheat	plastid	66.08	72.9
PGSC0003DMT400079716	Potato	nucleus	75.81	72.58
TraesCS2A01G403100.4	Wheat	nucleus	74.7	71.96
Zm00001d002650_P003	Maize	nucleus	74.79	71.67
GSMUA_Achr3P27070_001	Banana	nucleus	71.18	71.38
GSMUA_AchrUn_...	Banana	mitochondrion	70.34	71.33
Zm00001d026111_P014	Maize	nucleus	72.1	71.05
GSMUA_Achr1P07120_001	Banana	cytosol	69.51	70.96
TraesCS6B01G466700.1	Wheat	nucleus	66.27	70.58
EES18841	Sorghum	nucleus	72.47	70.51
Os02t0831600-01	Rice	extracellular	65.89	70.33
Zm00001d011096_P059	Maize	nucleus	71.55	69.68
TraesCS6A01G254600.2	Wheat	plastid	69.97	69.59
GSMUA_Achr7P04100_001	Banana	extracellular	15.94	69.35
TraesCS6B01G270900.1	Wheat	nucleus	69.69	69.31
Zm00001d025073_P001	Maize	cytosol	24.84	69.07
Zm00001d025331_P002	Maize	cytosol	35.31	69.02
Bra033698.1-P	Field mustard	plastid	62.0	68.69
Os06t0729300-01	Rice	nucleus	65.89	68.5
KXG20965	Sorghum	nucleus	66.36	68.32
TraesCS6D01G403900.1	Wheat	plastid	66.73	68.25
TraesCS6D01G235900.1	Wheat	endoplasmic reticulum	70.16	68.01
TraesCSU01G065300.1	Wheat	nucleus	74.79	67.7
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	71.64	67.28
TraesCS7B01G482100.1	Wheat	nucleus	63.95	66.86
TraesCS7A01G557400.1	Wheat	plastid	63.86	66.76
TraesCS7D01G553000.1	Wheat	cytosol	63.76	66.73
TraesCS7D01G036100.3	Wheat	endoplasmic reticulum, golgi	74.7	66.61
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	74.42	66.36
HORVU7Hr1G120600.3	Barley	cytosol, nucleus	63.48	64.38
HORVU7Hr1G007000.14	Barley	nucleus	72.01	63.85
OQU86027	Sorghum	plastid	64.04	62.59
Zm00001d014875_P001	Maize	nucleus	62.37	62.37
TraesCS3B01G027100.1	Wheat	cytosol	8.71	61.44
TraesCS2A01G258200.1	Wheat	cytosol	37.53	60.81
GSMUA_AchrUn_...	Banana	cytosol	16.22	57.57
Bra011993.1-P	Field mustard	plastid	50.88	56.83
TraesCS1D01G151300.3	Wheat	plastid	43.56	55.36
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	43.47	55.24
TraesCS2A01G258100.1	Wheat	mitochondrion	43.74	53.88
Os02t0169400-01	Rice	nucleus	43.19	53.2
HORVU2Hr1G103840.1	Barley	cytosol	11.03	47.6
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	9.36	46.76
Bra022918.1-P	Field mustard	nucleus	29.75	37.02
Bra020152.1-P	Field mustard	nucleus	29.75	35.43
Bra034318.1-P	Field mustard	nucleus	29.94	35.03
Bra002361.1-P	Field mustard	nucleus	29.56	35.02
Bra003999.1-P	Field mustard	nucleus	31.6	34.76
Bra002360.1-P	Field mustard	nucleus	29.19	33.87
Bra023172.1-P	Field mustard	nucleus	29.66	30.86
Bra040815.1-P	Field mustard	cytosol	28.82	30.82
Bra002349.1-P	Field mustard	nucleus	28.54	18.11

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaut_Gly-rich	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlantsGene:Bra014136	EnsemblPlants:Bra014136.1	EnsemblPlants:Bra014136.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M4DCC3
InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF12764
PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF102	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000254672F	SEG:seg	:

Description

AT1G48410 (E=0.0) AGO1 | AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding

Coordinates

chrA08:+:3191616..3196769

Molecular Weight (calculated)

119433.0 Da

IEP (calculated)

9.719

GRAVY (calculated)

-0.567

Length

1079 amino acids

Sequence
(BLAST)

0001: MVRKKRTDGS SEGGEGSGSR EAGPHSGGGR GGYQQGGGRG GGGGQQQGGR GYGPQSQQGG RGGGRGYGQP PQQYGGPRGG QQPQQYGGPR EGQQPQQYGG
0101: PREGQPPQHQ HQQQYGGPRG GPPRGGYGGG GRGGAPSAGQ PQRQSVPELH QATSPTYQAV SSQPTPSEVS PTRIPDTSAP VQEFEQLSIE QGASSQAIQP
0201: IPSSSKAFKF PMRPGKGQVG KRCIVKANHF FAELPDKDLH QYDVTITPEV TSRGVNRAVM KQLVDLYRES HLGRRLPAYD GRKSLYTAGP LPFVSKEFRI
0301: LLHDEEEGAG GQRREREFKV VIKLAARADL HHLGMFLQGK QADAPQEALQ VLDIVLRELP TSKYTPVARS FYSPDIGRKQ SLGDGLESWR GFYQSIRPTQ
0401: MGLSLNIDMS STAFIEALPV TEFVCQLLNR DIRSRPLSDA DRVKIKKALR GVKVEVTHRG NMRRKYRISG LTAVATRELT FPVDERNTQK SVVEYFYETY
0501: GFRIQHTQLP CLQVGNSNRP NYLPMEVCKI VEGQRYSKRL NERQITALLK VTCQRPQERE KDILRTVELN DYSHDPYAKE FGIKISASLA SVEARILPPP
0601: WLKYHESGRE GTCLPQVGQW NMMNKKMING GTVSNWICIN FSRQVPDNMA RSFCQELAQM CHISGMAFNP EPVLPPVSAR PEHVEKVLKT RYHDAMAKLS
0701: QGKEIDLLIV ILPDNNGSLY GDLKRICETE LGIVSQCCLT KHVFKMSKQY MANVALKINV KVGGRNTVLV DALSRRIPLV SDRPTIIFGA DVTHPHPGED
0801: SSPSIAAVVA SQDWPEVTKY AGLVCAQAHR QELIQDLFKE WKDPQKGVVT GGMIKELLIA FRRSTGHKPL RIIFYRDGVS EGQFYQVLLY ELDAIRKACA
0901: SLEAGYQPPV TFVVVQKRHH TRLFAQNHND RNSVDRSGNI LPGTVVDSKI CHPTEFDFYL CSHAGIQGTS RPAHYHVLWD ENNFSADGLQ SLTNNLCYTY
1001: ARCTRSVSIV PPAYYAHLAA FRARFYMEPE TSDSGSMASG SMARGGGMGG RNMRGPHVNA AVRPLPPLKD NVKRVMFYC

Best Arabidopsis Sequence Match ( AT5G43810.3 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.