Factsheet for Bra033698.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22332	Canola	plastid	99.9	99.79
AT5G43810.3	Thale cress	nucleus	94.76	93.42
KRG91384	Soybean	cytosol	84.29	84.29
KRH35431	Soybean	cytosol	83.78	83.78
VIT_05s0020g04190.t01	Wine grape	nucleus	75.15	83.37
PGSC0003DMT400077569	Potato	nucleus, plastid	81.83	83.11
KRH69078	Soybean	cytosol	82.55	82.72
Solyc09g082830.2.1	Tomato	nucleus	82.96	82.28
KRH31645	Soybean	nucleus	79.98	82.09
Bra014136.1-P	Field mustard	nucleus	68.69	62.0
Bra032254.1-P	Field mustard	nucleus	68.89	60.4
Bra011993.1-P	Field mustard	plastid	52.16	52.59
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	10.06	45.37
Bra022918.1-P	Field mustard	nucleus	32.14	36.1
Bra020152.1-P	Field mustard	nucleus	32.24	34.66
Bra002361.1-P	Field mustard	nucleus	31.72	33.92
Bra034318.1-P	Field mustard	nucleus	32.03	33.84
Bra003999.1-P	Field mustard	nucleus	33.78	33.54
Bra002360.1-P	Field mustard	nucleus	31.01	32.47
Bra040815.1-P	Field mustard	cytosol	30.7	29.63
Bra023172.1-P	Field mustard	nucleus	31.01	29.12
Bra002349.1-P	Field mustard	nucleus	31.11	17.81

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlantsGene:Bra033698	EnsemblPlants:Bra033698.1	EnsemblPlants:Bra033698.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009653	GO:GO:0009934
GO:GO:0009987	GO:GO:0010586	GO:GO:0031047	GO:GO:0035019	GO:GO:0035198	GO:GO:0051607
GO:GO:1902183	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M4EY08	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF45	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI000253F725	SEG:seg	:	:	:

Description

AT5G43810 (E=0.0) ZLL, PNH, AGO10 | ZLL (ZWILLE); translation initiation factor

Coordinates

chrA06:-:25548689..25553033

Molecular Weight (calculated)

109136.0 Da

IEP (calculated)

9.671

GRAVY (calculated)

-0.399

Length

974 amino acids

Sequence
(BLAST)

001: MPIRPMKETS ETHLLIKPKH LPKAVQNAKA PPTPTQASSP SPPSKNRSRR RNRGGRKSDQ GDVCMRPSSR PRKPPPQNAA PVAAVSGTEI VAVNHQMQMG
101: VRGSSKNSNF APRPGFGQLG TKCIVKANHF LADLPTKDLS HYDVTITPEV SSKSVNRAII AELVRLYKES ELGSRLPAYD GRKSLYTAGE LPFTWKEFAV
201: KIFDEDDGII NGPRERSYKV AIKFVARANM HHLGEFLAGK RADGPQEALQ ILDIVLRELS VKRFCPVGRS FFSPDIRTPQ RLGEGLQSWC GFYQSIRPTQ
301: MGLSLNIDMA SAAFIEPLPV IEFVAQLLGK DVLSKPLSDS DRIKIKKGLR GVKVEVTHRA NVRRKYRVAG LTTQPTRELM FPVDENATMK SVIEYFQEMY
401: GFTIQHTHLP CLQVGNQKKA SYLPMEACKI VEGQRYTKRL NEKQITALLK VTCQRPRDRE NDILKTVQHN AYDQDPYAKE FGMNISEKLA SVEARILPAP
501: WLKYHENGKE KDCLPQVGQW NMMNKKMING MTVSRWACVN FSRSVQENVA RGFCNELGQM CEVSGMEFNP EPVIPIYSAR PDQVEKALKH VYHTAMNKTK
601: GKELELLLAI LPDNNGSLYG DLKRICETEL GLISQCCLTK HVFKISKQYL ANVSLKINVK MGGRNTVLLD AISCRIPLVS DIPTIIFGAD VTHPENGEES
701: SPSIAAVVAS QDWPEVTKYA GLVCAQAHRQ ELIQDLYKTW QDPVRGTVSG GMIRDLLISF RKATGQKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS
801: LEPNYQPPVT FIVVQKRHHT RLFANNHRDK SSTDRSGNIL PGTVVDTKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGIQS LTNNLCYTYA
901: RCTRSVSVVP PAYYAHLAAF RARFYMEPEI MQDNGSPGKK NTKTTTVGDH GVVGGGVKPL PALKENVKRV MFYC

Best Arabidopsis Sequence Match ( AT5G43810.3 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.