CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033698.1-P	Field mustard	plastid	99.79	99.9
CDX94724	Canola	plastid	98.87	98.27
AT5G43810.3	Thale cress	nucleus	94.77	93.52
KRG91384	Soybean	cytosol	84.21	84.29
KRH35431	Soybean	cytosol	83.69	83.78
VIT_05s0020g04190.t01	Wine grape	nucleus	75.08	83.37
PGSC0003DMT400077569	Potato	nucleus, plastid	81.74	83.11
KRH69078	Soybean	cytosol	82.46	82.72
Solyc09g082830.2.1	Tomato	nucleus	82.87	82.28
KRH31645	Soybean	nucleus	79.9	82.09
CDY04311	Canola	cytosol, nucleus, plastid	67.08	66.73
CDY41831	Canola	nucleus	68.41	63.89
CDY68174	Canola	nucleus	68.51	63.5
CDY23683	Canola	cytosol, nucleus, plastid	67.38	60.5
CDX71410	Canola	nucleus	51.9	53.15
CDY04517	Canola	plastid	51.9	52.87
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	10.56	43.64
CDY72062	Canola	plastid	12.72	41.75
CDX92417	Canola	nucleus	24.1	36.49
CDX84712	Canola	nucleus	32.1	36.1
CDX79495	Canola	nucleus	31.79	35.76
CDY09103	Canola	nucleus	32.21	34.66
CDY16587	Canola	nucleus	31.18	34.47
CDY51501	Canola	nucleus	31.28	33.93
CDY48192	Canola	nucleus	32.0	33.84
CDY56413	Canola	nucleus	32.0	33.8
CDX77061	Canola	nucleus	31.9	33.73
CDY04475	Canola	nucleus	31.9	33.69
CDX92405	Canola	nucleus	31.49	33.55
CDY07349	Canola	nucleus	33.85	33.54
CDX92406	Canola	nucleus	31.08	33.52
CDY28550	Canola	cytosol, plastid	33.44	33.4
CDY59516	Canola	nucleus	30.97	33.33
CDY70429	Canola	plastid	30.15	33.15
CDY25885	Canola	cytosol	30.67	29.6
CDY16595	Canola	nucleus	27.79	29.46
CDY02373	Canola	nucleus	30.77	29.33
CDY55876	Canola	cytosol	30.46	28.7
CDY62055	Canola	nucleus	13.03	22.05

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	GO:A0A078GB71	UniProt:A0A078GB71
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlants:CDY22332	ProteinID:CDY22332
ProteinID:CDY22332.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSBRNA2T00018806001	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699
PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF45	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0004EDE32D	SEG:seg	:

Description

BnaA06g36540DBnaA06g36540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GB71]

Coordinates

chrLK032130:-:166640..171560

Molecular Weight (calculated)

109278.0 Da

IEP (calculated)

9.706

GRAVY (calculated)

-0.403

Length

975 amino acids

Sequence
(BLAST)

001: MPIRPMKETS ETHLLIKPKH LPKAVQNAKA PPTPSQASSP SPPSKNRSRR RNRGGRKSDQ GDVCMRPSSR PRKPPPQNAA PVAAVSGTEI VAVNHQMQMG
101: VRGSSKNSNF APRPGFGQLG TKCIVKANHF LADLPTKDLS HYDVTITPEV SSKSVNRAII AELVRLYKES ELGSRLPAYD GRKSLYTAGE LPFTWKEFAV
201: KIFDEDDGII NGPRRERSYK VAIKFVARAN MHHLGEFLAG KRADGPQEAL QILDIVLREL SVKRFCPVGR SFFSPDIRTP QRLGEGLQSW CGFYQSIRPT
301: QMGLSLNIDM ASAAFIEPLP VIEFVAQLLG KDVLSKPLSD SDRIKIKKGL RGVKVEVTHR ANVRRKYRVA GLTTQPTREL MFPVDENATM KSVIEYFQEM
401: YGFTIQHTHL PCLQVGNQKK ASYLPMEACK IVEGQRYTKR LNEKQITALL KVTCQRPRDR ENDILKTVQH NAYDQDPYAK EFGMNISEKL ASVEARILPA
501: PWLKYHENGK EKDCLPQVGQ WNMMNKKMIN GMTVSRWACV NFSRSVQENV ARGFCNELGQ MCEVSGMEFN PEPVIPIYSA RPDQVEKALK HVYHTAMNKT
601: KGKELELLLA ILPDNNGSLY GDLKRICETE LGLISQCCLT KHVFKISKQY LANVSLKINV KMGGRNTVLL DAISCRIPLV SDIPTIIFGA DVTHPENGEE
701: SSPSIAAVVA SQDWPEVTKY AGLVCAQAHR QELIQDLYKT WQDPVRGTVS GGMIRDLLIS FRKATGQKPL RIIFYRDGVS EGQFYQVLLY ELDAIRKACA
801: SLEPNYQPPV TFIVVQKRHH TRLFANNHRD KSSTDRSGNI LPGTVVDTKI CHPTEFDFYL CSHAGIQGTS RPAHYHVLWD ENNFTADGIQ SLTNNLCYTY
901: ARCTRSVSVV PPAYYAHLAA FRARFYMEPE IMQDNGSPGK KNTKTTTVGD HGVVGGGVKP LPALKENVKR VMFYC

Best Arabidopsis Sequence Match ( AT5G43810.3 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.