Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07349 | Canola | nucleus | 97.0 | 88.62 |
| AT1G69440.1 | Thale cress | cytosol | 85.65 | 77.78 |
| CDY28550 | Canola | cytosol, plastid | 84.43 | 77.77 |
| GSMUA_Achr7P26400_001 | Banana | cytosol | 42.71 | 60.28 |
| VIT_03s0038g00830.t01 | Wine grape | nucleus | 64.07 | 57.54 |
| VIT_01s0113g00500.t01 | Wine grape | nucleus | 63.29 | 56.73 |
| PGSC0003DMT400062439 | Potato | nucleus | 62.74 | 56.29 |
| Solyc01g010970.2.1 | Tomato | nucleus | 62.51 | 56.2 |
| KRH70802 | Soybean | nucleus | 64.29 | 56.06 |
| KRH74941 | Soybean | nucleus | 64.07 | 55.98 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 54.06 | 52.03 |
| Zm00001d029573_P001 | Maize | cytosol | 57.06 | 49.71 |
| EER92100 | Sorghum | cytosol | 57.06 | 49.66 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 55.28 | 49.11 |
| Os03t0449200-00 | Rice | nucleus | 56.84 | 48.76 |
| TraesCS2B01G434000.1 | Wheat | nucleus | 55.39 | 47.43 |
| TraesCS2D01G412100.1 | Wheat | plastid | 55.06 | 44.32 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 10.34 | 39.41 |
| CDY72062 | Canola | plastid | 11.68 | 35.35 |
| CDY04517 | Canola | plastid | 34.93 | 32.81 |
| CDX71410 | Canola | nucleus | 34.48 | 32.56 |
| CDY70429 | Canola | plastid | 31.15 | 31.57 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 34.26 | 31.43 |
| CDY22332 | Canola | plastid | 33.93 | 31.28 |
| CDX94724 | Canola | plastid | 33.82 | 30.99 |
| CDY41831 | Canola | nucleus | 35.04 | 30.17 |
| CDY68174 | Canola | nucleus | 35.26 | 30.13 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 34.48 | 28.55 |
| CDY02373 | Canola | nucleus | 32.26 | 28.35 |
| CDY25885 | Canola | cytosol | 31.48 | 28.02 |
| CDX79495 | Canola | nucleus | 26.7 | 27.68 |
| CDX84712 | Canola | nucleus | 26.47 | 27.45 |
| CDX92417 | Canola | nucleus | 19.58 | 27.33 |
| CDY56413 | Canola | nucleus | 27.81 | 27.09 |
| CDY04475 | Canola | nucleus | 27.81 | 27.09 |
| CDY55876 | Canola | cytosol | 31.03 | 26.96 |
| CDY48192 | Canola | nucleus | 27.59 | 26.9 |
| CDY16587 | Canola | nucleus | 26.36 | 26.87 |
| CDY09103 | Canola | nucleus | 27.03 | 26.82 |
| CDX77061 | Canola | nucleus | 27.48 | 26.79 |
| CDX92406 | Canola | nucleus | 26.92 | 26.77 |
| CDX92405 | Canola | nucleus | 26.81 | 26.34 |
| CDY59516 | Canola | nucleus | 26.47 | 26.27 |
| CDY16595 | Canola | nucleus | 22.91 | 22.39 |
| CDY62055 | Canola | nucleus | 10.46 | 16.32 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | GO:A0A078INF4 | UniProt:A0A078INF4 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaute_N | EnsemblPlants:CDY51501 | ProteinID:CDY51501 | ProteinID:CDY51501.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:GSBRNA2T00003595001 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 |
| InterPro:MIP_CS | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 |
| PFAM:PF16486 | PFAM:PF16488 | ScanProsite:PS00221 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 |
| PANTHER:PTHR22891:SF9 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 |
| SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI0004EEEB62 | SEG:seg | : | : |
Description
BnaC06g43420DBnaC06g43420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INF4]
Coordinates
chrLK033002:+:42161..45607
Molecular Weight (calculated)
102675.0 Da
IEP (calculated)
9.750
GRAVY (calculated)
-0.473
Length
899 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKTKNHHT NKHIRNSKSR TPLLHKPPPP FHHVHTNPLL FPSSSLHQSL NLLSSSIHSS YYYYCFYSQF HNTLPPPPPP LPFHPSPPLL PLPPPEQRFF
101: NSISKPLSLP PVVERKQKKQ VFEHKDNSRN IKVISGSTEA ALVVAKRPDS GGQEGSVIYL LANHFLVKFD PSQKIYHYNV DITPNPSKEI ARLIKQKLVE
201: TEGEDSFSGS VPAFDGRQNI YSPVEFQEDK LEFFKKTDKL FRVSMRLVSK FDGKKQSERW TPLPQEYIHA LDVILRENPT EKCTSIGRSF YSSSMGGSKE
301: IGGGSVGLRG FFQSLRQTQQ GLALNIDLSI AAFHESIGVI AYLQKKLEFL KDLSRNKGRE LSLEERREVE KALKNIRVFD RDGKQLRVMS YFKDHYGYEI
401: QYKSLPCLQI SRTRPCYLPM ELCVICEGQK FLGKLSDDQT AKIMQMGCQR PNERKDTIDK VMSGPVGPSS GNQTREFNLE VTREMTLLKG RVLQPPKLKL
501: DRPRSLVVKG TRWALMSIGG SSDQKSTVPK FIHELTQKCE HLGVFLSKNT MSTTFFEPSH ILNNVSLLEL KLKEIQRAAS SNLQLIICVM ERKHKGYGDL
601: KRIAETKIGV VTQCCLYPNI TKLNSQFVSN LALKINAKIA DVTHPHPFDD CSPSVAAVVG SINWPEANRY VSRMRSQTHR QEIIQDLDVM VKELLEDFHK
701: ALKKLPNRII FFRDGVSETQ FKKVLQEELQ SIKAACSNFD HYNPTITFAV VQKRHHTRLF RRDPVCRHEN IPPGTVVDTV ITHPKEFDFY LCSHLGAKGT
801: SRPTHYHILW DENEFTSDEF QRLVYNLCYT FVRCTKPVSI VPPAYYAHLA AYRGRLYIER SSETNGGSMN PSCVSRVGPP RTIPLPKLSD NVKNLMFYC
101: NSISKPLSLP PVVERKQKKQ VFEHKDNSRN IKVISGSTEA ALVVAKRPDS GGQEGSVIYL LANHFLVKFD PSQKIYHYNV DITPNPSKEI ARLIKQKLVE
201: TEGEDSFSGS VPAFDGRQNI YSPVEFQEDK LEFFKKTDKL FRVSMRLVSK FDGKKQSERW TPLPQEYIHA LDVILRENPT EKCTSIGRSF YSSSMGGSKE
301: IGGGSVGLRG FFQSLRQTQQ GLALNIDLSI AAFHESIGVI AYLQKKLEFL KDLSRNKGRE LSLEERREVE KALKNIRVFD RDGKQLRVMS YFKDHYGYEI
401: QYKSLPCLQI SRTRPCYLPM ELCVICEGQK FLGKLSDDQT AKIMQMGCQR PNERKDTIDK VMSGPVGPSS GNQTREFNLE VTREMTLLKG RVLQPPKLKL
501: DRPRSLVVKG TRWALMSIGG SSDQKSTVPK FIHELTQKCE HLGVFLSKNT MSTTFFEPSH ILNNVSLLEL KLKEIQRAAS SNLQLIICVM ERKHKGYGDL
601: KRIAETKIGV VTQCCLYPNI TKLNSQFVSN LALKINAKIA DVTHPHPFDD CSPSVAAVVG SINWPEANRY VSRMRSQTHR QEIIQDLDVM VKELLEDFHK
701: ALKKLPNRII FFRDGVSETQ FKKVLQEELQ SIKAACSNFD HYNPTITFAV VQKRHHTRLF RRDPVCRHEN IPPGTVVDTV ITHPKEFDFY LCSHLGAKGT
801: SRPTHYHILW DENEFTSDEF QRLVYNLCYT FVRCTKPVSI VPPAYYAHLA AYRGRLYIER SSETNGGSMN PSCVSRVGPP RTIPLPKLSD NVKNLMFYC
001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC
Arabidopsis Description
AGO7Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.