Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72062 | Canola | plastid | 31.18 | 92.59 |
| CDX92417 | Canola | nucleus | 65.65 | 89.91 |
| CDY59516 | Canola | nucleus | 78.23 | 76.16 |
| CDX92406 | Canola | nucleus | 78.0 | 76.11 |
| CDX92405 | Canola | nucleus | 76.53 | 73.77 |
| CDY09103 | Canola | nucleus | 73.92 | 71.96 |
| AT5G21030.2 | Thale cress | cytosol | 66.78 | 68.97 |
| CDY16595 | Canola | nucleus | 69.39 | 66.52 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 16.21 | 60.59 |
| CDY04475 | Canola | nucleus | 62.93 | 60.13 |
| CDY56413 | Canola | nucleus | 62.81 | 60.02 |
| CDY48192 | Canola | nucleus | 62.47 | 59.76 |
| CDX77061 | Canola | nucleus | 62.36 | 59.65 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 61.45 | 59.23 |
| Os01t0275600-01 | Rice | nucleus | 60.66 | 59.18 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 31.18 | 59.01 |
| Zm00001d008249_P012 | Maize | nucleus | 59.98 | 58.78 |
| Zm00001d040429_P012 | Maize | nucleus | 59.86 | 58.6 |
| Os04t0151800-02 | Rice | nucleus | 60.43 | 58.51 |
| PGSC0003DMT400039204 | Potato | cytosol | 9.86 | 58.0 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 60.54 | 57.92 |
| OQU86696 | Sorghum | nucleus | 59.07 | 57.89 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 59.98 | 57.75 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 59.98 | 56.04 |
| EES18816 | Sorghum | nucleus | 57.6 | 55.89 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 58.16 | 55.64 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 58.28 | 55.57 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 56.69 | 55.49 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 58.28 | 55.45 |
| Zm00001d039214_P025 | Maize | nucleus | 57.26 | 54.65 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 55.67 | 54.02 |
| CDX84712 | Canola | nucleus | 52.95 | 53.86 |
| CDX79495 | Canola | nucleus | 52.49 | 53.4 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 55.44 | 53.21 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 48.53 | 52.77 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 59.86 | 52.69 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 48.19 | 52.66 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 54.42 | 51.84 |
| EES00570 | Sorghum | nucleus | 52.49 | 51.56 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 51.02 | 51.19 |
| Os01t0275200-00 | Rice | golgi, peroxisome, plastid | 26.3 | 49.68 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 41.38 | 46.44 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 45.58 | 43.89 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 8.62 | 41.76 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 26.87 | 39.63 |
| CDY62055 | Canola | nucleus | 24.15 | 36.98 |
| CDX94724 | Canola | plastid | 34.81 | 31.29 |
| CDY22332 | Canola | plastid | 34.47 | 31.18 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 34.47 | 31.02 |
| CDX71410 | Canola | nucleus | 33.11 | 30.67 |
| CDY04517 | Canola | plastid | 33.22 | 30.62 |
| CDY41831 | Canola | nucleus | 35.03 | 29.6 |
| CDY68174 | Canola | nucleus | 35.26 | 29.56 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 34.35 | 27.9 |
| CDY51501 | Canola | nucleus | 26.87 | 26.36 |
| CDY70429 | Canola | plastid | 26.19 | 26.04 |
| CDY28550 | Canola | cytosol, plastid | 28.12 | 25.41 |
| CDY07349 | Canola | nucleus | 28.34 | 25.41 |
| CDY25885 | Canola | cytosol | 26.98 | 23.56 |
| CDY02373 | Canola | nucleus | 26.53 | 22.87 |
| CDY55876 | Canola | cytosol | 26.19 | 22.32 |
Protein Annotations
| MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | GO:A0A078FUV6 | UniProt:A0A078FUV6 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaute_N | EnsemblPlants:CDY16587 | ProteinID:CDY16587 | ProteinID:CDY16587.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:GSBRNA2T00094393001 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF20 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| UniParc:UPI0004EE1D1F | SEG:seg | : | : | : | : |
Description
BnaC09g36860DBnaC09g36860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUV6]
Coordinates
chrLK032065:-:447991..453180
Molecular Weight (calculated)
99378.2 Da
IEP (calculated)
9.525
GRAVY (calculated)
-0.402
Length
882 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNRSGHLQ MARSGNGSRG QKIDLLTNHF GVNFTSKSQH FFQYSVAITY EDGNPVEAKG IGRKILAKVQ ETYQTDLGSK HFAYDGDKTL FTVGPLPNNK
101: LDFSVVLEDM SCTRSNTSTS DANTKRLRPH NQSKRFNVAI SFAAKISMQA IQGALQGKET NDLQDAVRVL DVILRQNAAT KGCLLVRQSF FHNDAKYFSN
201: NHGGFHLCRG FHSSFRATQG GLSLNIDVSS TLIVSPGPVI DFLVLNQEVR DPSSIDWKKA ERSLKNLRVK VDPSNREYKI TGLTRLPCRD QTFLWKQKQG
301: NGETKEVEVT VYDYFTKHLE IELRHSGGLP CISVGKPKRP TYFPIEQCHL VSLQRYTKAP TIFQRSKLVK ESVQKPQEKM NVLNNSMKKS NYNADLVLQE
401: SGVSIGSSFI QVEGRVLPAP RLRIGNGEEF QPRNGRWNFN KKKLVEPVTV TRWVVVNFSA GCDTDRLISD LIRCGKMKGM NVEPPYKVVF QENPNYRGAP
501: ANIRVEKMFE QIQSELRKEG KPKFILCVLA EKKNSLVYGP WKKKNLIEHG IVTQCIAPPK NVRDQYITNV LLKINAKLGG LNSLLAMERS RAMMPLVTQV
601: YTFIVGMDVS HGSPNQADIP SIAAVVGSRE WPLISKYRAC VRTQSRKVEM IDNLFKPVTD ENGKLVDEGI FWELLFDFYT SSGKRRPEHI IIFRDGVSEY
701: QFNQVHNIEL DQMMQACKFV EENWEPKFTV IIAQKNHHTK FFQAESPGNV PPDNVPPGTI VDSKICHPRN NDFYLCAHNG MIGTTRPTHY HVLYDEIGFS
801: TDDLQQLVHS LSYVYQRSTT AISVVAPIMY AHLAAAQMAT AVKFEDSSET SSRHGGITTS EAELVPPMPK LNANVASSMF FC
101: LDFSVVLEDM SCTRSNTSTS DANTKRLRPH NQSKRFNVAI SFAAKISMQA IQGALQGKET NDLQDAVRVL DVILRQNAAT KGCLLVRQSF FHNDAKYFSN
201: NHGGFHLCRG FHSSFRATQG GLSLNIDVSS TLIVSPGPVI DFLVLNQEVR DPSSIDWKKA ERSLKNLRVK VDPSNREYKI TGLTRLPCRD QTFLWKQKQG
301: NGETKEVEVT VYDYFTKHLE IELRHSGGLP CISVGKPKRP TYFPIEQCHL VSLQRYTKAP TIFQRSKLVK ESVQKPQEKM NVLNNSMKKS NYNADLVLQE
401: SGVSIGSSFI QVEGRVLPAP RLRIGNGEEF QPRNGRWNFN KKKLVEPVTV TRWVVVNFSA GCDTDRLISD LIRCGKMKGM NVEPPYKVVF QENPNYRGAP
501: ANIRVEKMFE QIQSELRKEG KPKFILCVLA EKKNSLVYGP WKKKNLIEHG IVTQCIAPPK NVRDQYITNV LLKINAKLGG LNSLLAMERS RAMMPLVTQV
601: YTFIVGMDVS HGSPNQADIP SIAAVVGSRE WPLISKYRAC VRTQSRKVEM IDNLFKPVTD ENGKLVDEGI FWELLFDFYT SSGKRRPEHI IIFRDGVSEY
701: QFNQVHNIEL DQMMQACKFV EENWEPKFTV IIAQKNHHTK FFQAESPGNV PPDNVPPGTI VDSKICHPRN NDFYLCAHNG MIGTTRPTHY HVLYDEIGFS
801: TDDLQQLVHS LSYVYQRSTT AISVVAPIMY AHLAAAQMAT AVKFEDSSET SSRHGGITTS EAELVPPMPK LNANVASSMF FC
001: MDTTLPPPQH MEREPLKSKS SLLPMTRRGN GSKGQKILLL TNHFRVNFRK PNSHNFFHYS VTITYEDGSP LLAKGFGRKI LEKVQQTCQA DLGCKHFAYD
101: GDKNLYTVGP LPRSSLDFSV VLETAPSRRN ADKRLKLPHQ SKKFNVAILF APPEIPMEAI ANALQGKKTK HLLDAIRVMD CILSQNAARQ GCLLVRQSFF
201: HNDAKYFANI GEGVDCCKGF HSSFRTTQGG LSLNIDVSTA MIVKPGPVVD FLIANQGVND PFSINWKKAK NTLKNLRVKV LPSNQEYKIT GLSGLHCKDQ
301: TFTWKKRNQN REFEEVEITV SDYFTRIREI ELRYSGGLPC INVGKPNRPT YFPIELCELV SLQRYTKALT KFQRSNLIKE SRQNPQQRIG VLTRALKTSN
401: YNDDPMLQEC GVRIGSDFTQ VEGRVLPTPK LKAGKEQDIY PINGSWNFKN KTFFKPATVT RWAVVNFSAR CDPQKIIDDL TRCGKMKGIN VDSPYHVVFE
501: ENPQFKDATG SVRVDKMFQH LQSILGEVPP KFLLCILEKK NSDVYEKSCS MWNCECIVPP QNLNDQYLTN LLLKINAKLG GLNSVLDMEL SGTMPLVMRV
601: PTIIIGMDVS HGSPGQSDHI PSIAAVVSSR EWPLISKYRA CVRTQSPKVE MIDSLFKPVS DKDDQGIMRE LLLDFHSSSG KKPNHIIIFR DGVSESQFNQ
701: VLNIELDQMM QINHHTKFFQ TESPNNVLPG TIIDSNICHQ HNNDFYLCAH AGKIGTTRPT HYHVLYDEIG FDTDQLQELV HSLSYVYQRS TTAISLVAPI
801: CYAHLAAAQM ATAMKFEDMS ETSSSHGGIT TAGAVPVPPM PKLNTNVASS MFFC
101: GDKNLYTVGP LPRSSLDFSV VLETAPSRRN ADKRLKLPHQ SKKFNVAILF APPEIPMEAI ANALQGKKTK HLLDAIRVMD CILSQNAARQ GCLLVRQSFF
201: HNDAKYFANI GEGVDCCKGF HSSFRTTQGG LSLNIDVSTA MIVKPGPVVD FLIANQGVND PFSINWKKAK NTLKNLRVKV LPSNQEYKIT GLSGLHCKDQ
301: TFTWKKRNQN REFEEVEITV SDYFTRIREI ELRYSGGLPC INVGKPNRPT YFPIELCELV SLQRYTKALT KFQRSNLIKE SRQNPQQRIG VLTRALKTSN
401: YNDDPMLQEC GVRIGSDFTQ VEGRVLPTPK LKAGKEQDIY PINGSWNFKN KTFFKPATVT RWAVVNFSAR CDPQKIIDDL TRCGKMKGIN VDSPYHVVFE
501: ENPQFKDATG SVRVDKMFQH LQSILGEVPP KFLLCILEKK NSDVYEKSCS MWNCECIVPP QNLNDQYLTN LLLKINAKLG GLNSVLDMEL SGTMPLVMRV
601: PTIIIGMDVS HGSPGQSDHI PSIAAVVSSR EWPLISKYRA CVRTQSPKVE MIDSLFKPVS DKDDQGIMRE LLLDFHSSSG KKPNHIIIFR DGVSESQFNQ
701: VLNIELDQMM QINHHTKFFQ TESPNNVLPG TIIDSNICHQ HNNDFYLCAH AGKIGTTRPT HYHVLYDEIG FDTDQLQELV HSLSYVYQRS TTAISLVAPI
801: CYAHLAAAQM ATAMKFEDMS ETSSSHGGIT TAGAVPVPPM PKLNTNVASS MFFC
Arabidopsis Description
PAZ domain-containing protein / piwi domain-containing protein [Source:TAIR;Acc:AT5G21030]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.