CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22332	Canola	plastid	98.27	98.87
AT5G43810.3	Thale cress	nucleus	94.5	93.83
KRG91384	Soybean	cytosol	83.89	84.5
KRH35431	Soybean	cytosol	83.38	83.98
VIT_05s0020g04190.t01	Wine grape	nucleus	74.82	83.6
PGSC0003DMT400077569	Potato	nucleus, plastid	81.35	83.21
KRH69078	Soybean	cytosol	82.16	82.92
Solyc09g082830.2.1	Tomato	nucleus	82.47	82.38
KRH31645	Soybean	nucleus	79.61	82.3
CDY04311	Canola	cytosol, nucleus, plastid	66.97	67.04
CDY41831	Canola	nucleus	68.3	64.18
CDY68174	Canola	nucleus	68.4	63.78
CDY23683	Canola	cytosol, nucleus, plastid	67.28	60.77
CDX71410	Canola	nucleus	51.68	53.26
CDY04517	Canola	plastid	51.68	52.98
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	10.5	43.64
CDY72062	Canola	plastid	12.64	41.75
CDX92417	Canola	nucleus	24.06	36.65
CDX84712	Canola	nucleus	32.11	36.33
CDX79495	Canola	nucleus	31.8	35.99
CDY09103	Canola	nucleus	32.31	34.99
CDY16587	Canola	nucleus	31.29	34.81
CDY48192	Canola	nucleus	32.11	34.16
CDY56413	Canola	nucleus	32.11	34.13
CDX77061	Canola	nucleus	32.01	34.06
CDY04475	Canola	nucleus	32.01	34.02
CDX92405	Canola	nucleus	31.7	33.99
CDY51501	Canola	nucleus	30.99	33.82
CDX92406	Canola	nucleus	31.09	33.74
CDY59516	Canola	nucleus	30.99	33.55
CDY07349	Canola	nucleus	33.54	33.44
CDY28550	Canola	cytosol, plastid	33.13	33.3
CDY70429	Canola	plastid	29.87	33.03
CDY16595	Canola	nucleus	28.03	29.89
CDY25885	Canola	cytosol	30.28	29.41
CDY02373	Canola	nucleus	30.48	29.23
CDY55876	Canola	cytosol	30.07	28.5
CDY62055	Canola	nucleus	12.95	22.05

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	GO:A0A078E281	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlants:CDX94724	ProteinID:CDX94724	ProteinID:CDX94724.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSBRNA2T00158123001	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397
InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486
PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF45
InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163
SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0004EB9D17	SEG:seg	:	:

Description

BnaC07g17330D

Coordinates

chrLK031884:+:319415..325081

Molecular Weight (calculated)

109751.0 Da

IEP (calculated)

9.706

GRAVY (calculated)

-0.410

Length

981 amino acids

Sequence
(BLAST)

001: MPIRPMKETS ETHLLIKPKH LPKAVQNGKS PPTPATTTAA AQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPQNAPVA AVSGTEIVAV
101: NHQMQMGVRG SSKNSNFAPR PGFGQLGTKC IVKANHFLAD LPTKDLNHYD VTITPEVSSK SVNRAIIAEL VRLYKESDLG SRLPAYDGRK SLYTAGELPF
201: TWKEFTVKIF DEDDGIINGP RRERSYKVAI KFAARANMHH LGEFLAGKRA DGPQEALQIL DIVLRELSVK RFCPVGRSFF SPDIRTPQRL GEGLQSWCGF
301: YQSIRPTQMG LSLNIDMASA AFIEPLPVIE FVAQLLGKDV LSKPLSDSDR IKIKKGLRGV KVEVTHRANV RRKYRVAGLT AQPTRELMFP VDENATMKSV
401: IEYFQEMYGF TIQHTHLPCL QVGNQKKASY LPMEACKIVE GQRYTKRLNE KQITALLKVT CQRPRDREND ILKTVQHNAY DQDPYAKEFG VNISEKLASV
501: EARILPAPWL KYHENGKEKD CLPQVGQWNM MNKKMINGMT VSRWACVNFS RSVQENVARG FCNELGQMCE VSGMEFNPEP VIPIYSARPD QVEKALKHVY
601: HTAMNKTKGK ELELLLAILP DNNGSLYGDL KRICETELGL ISQCCLTKHV FKISKQYLAN VSLKINVKMG GRNTVLLDAI SCRIPLVSDI PTIIFGADVT
701: HPENGEESSP SIAAVVASQD WPEVTKYAGL VCAQAHRQEL IQDLYKTWQD PVRGTVSGGM IRDLLISFRK ATGQKPLRII FYRDGVSEGQ FYQVLLYELD
801: AIRKACASLE PNYQPPVTFI VVQKRHHTRL FANNHRDKSS TDRSGNILPG TVVDTKICHP TEFDFYLCSH AGIQGTSRPA HYHVLWDENN FTADGIQSLT
901: NNLCYTYARC TRSVSVVPPA YYAHLAAFRA RFYMEPEIMQ DNGSPGKKST KTTTVGDHGV GGGVKPLPAL KENVKRVMFY C

Best Arabidopsis Sequence Match ( AT5G43810.3 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.