Factsheet for Solyc09g082830.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400077569	Potato	nucleus, plastid	96.44	98.75
VIT_05s0020g04190.t01	Wine grape	nucleus	78.0	87.24
KRG91384	Soybean	cytosol	84.32	85.01
KRH35431	Soybean	cytosol	83.71	84.39
KRH69078	Soybean	cytosol	82.38	83.23
Bra033698.1-P	Field mustard	plastid	82.28	82.96
CDY22332	Canola	plastid	82.28	82.87
KRH31645	Soybean	nucleus	79.84	82.61
CDX94724	Canola	plastid	82.38	82.47
AT5G43810.3	Thale cress	nucleus	82.18	81.68
Solyc12g006790.1.1	Tomato	nucleus	67.82	71.38
Solyc03g098280.2.1	Tomato	nucleus	68.64	68.78
Solyc06g072300.2.1	Tomato	nucleus	71.38	66.51
Solyc06g074730.2.1	Tomato	nucleus	50.31	48.86
Solyc01g008960.2.1	Tomato	nucleus	33.1	35.75
Solyc01g096750.1.1	Tomato	nucleus	31.77	35.41
Solyc06g073540.2.1	Tomato	nucleus	32.38	34.83
Solyc07g049500.2.1	Tomato	nucleus	31.47	34.22
Solyc06g073530.1.1	Tomato	nucleus	31.16	33.85
Solyc01g010970.2.1	Tomato	nucleus	34.22	33.6
Solyc02g069260.2.1	Tomato	nucleus	31.67	29.85
Solyc02g069270.2.1	Tomato	cytosol	29.53	29.68
Solyc02g069280.2.1	Tomato	nucleus	30.14	29.63
Solyc03g111760.2.1	Tomato	mitochondrion	27.39	29.37

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605
GO:GO:0009607	GO:GO:0009653	GO:GO:0009934	GO:GO:0009987	GO:GO:0010586	GO:GO:0031047
GO:GO:0035019	GO:GO:0035198	GO:GO:0051607	GO:GO:1902183	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	UniProt:K4CVQ9	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF45	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949
SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:Solyc09g082830.2	EnsemblPlants:Solyc09g082830.2.1
UniParc:UPI000276C34D	SEG:seg	:	:	:	:

Description

Protein argonaute 10 [Source:Projected from Arabidopsis thaliana (AT5G43810) UniProtKB/Swiss-Prot;Acc:Q9XGW1]

Coordinates

chr9:-:68491048..68497492

Molecular Weight (calculated)

110528.0 Da

IEP (calculated)

9.551

GRAVY (calculated)

-0.430

Length

982 amino acids

Sequence
(BLAST)

001: MPIRQMKESS EQHIVIKPHL QNTMNPVQKN PKTTQNGKGP PNQEPPNNKI HIQTSPPSRN RGRRRGRGGK KSDQGETFMR PSSRPCTAAS KPVIAASVEA
101: TNVSGVESNG TSSGFPSSSK SLCFAPRPGY GQLGTKCIVK ANHFLADFPD KELNQYDVTV IPEVSSRTVN RAIMAELVKL YKESHLGMRL PAYDGRKSLY
201: TAGELPFKWK EFTIKLIDED DVINGPKRER EYKVVIKFVA RANLHHLSEF LAGKRADGPK EALQILDIVL RELSIKRYCP VGRSFFSPDI RKPQPLGDGL
301: EAWCGFYQSI RPTQMGLSLN IDMASAAFIE ALPVIEFVAQ LLGKDVSSRP LSDSDRVKIK KALRGVKVEV THRGNVRRKY RVSGLTTQPT RELVFPVDDN
401: LTMKSVVEYF QEMYGFTIKN THLPCLQVGN QKKANYLPME ACKIVEGQRY TKRLSEKQIT SLLKVTCQRP RDRENSILQT VQHNDYNEDP YAKEFGIKIS
501: EKQASVEARV LPAPWLKYHE TGKEKDCLPQ VGQWNMMNKK MINGMTVNRW ACINFSRSVQ ESVARGFCNE LTQMCQVSGM EFNPDPIIPI YMARPDQVEK
601: ALKHVYHSCV NKLKGKELEL LLVILPDNNG SLYGDIKRIC ETDLGLITQC CLTKHVFKIS KQYLANVSLK INVKMGGRNT VLLDAISCRI PLVSDIPTII
701: FGADVTHPEN GEDSSPSIAA VVASQDWPEV TKYAGLVCAQ AHRQELIQDL YKTWHDPARG TVSGGMIRDL LISFRKATGQ KPQRIIFYRD GVSEGQFYQV
801: LLFELDAIRK ACASLEPNYQ PPVTFIVVQK RHHTRLFANN HKDRSSIDRS GNILPGTVVD TKICHPTEFD FYLCSHAGIQ GTSRPAHYHV LWDENNFTAD
901: GIQSLTNNLC YTYARCTRSV SVVPPAYYAH LAAFRARFYM EPDMPETNSG SPHQGSSKAI RETGVRPLPA LKENVKRVMF YC

Best Arabidopsis Sequence Match ( AT5G43810.3 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.