Factsheet for Solyc01g010970.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 4
cytosol 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062439	Potato	nucleus	97.1	96.91
VIT_03s0038g00830.t01	Wine grape	nucleus	74.6	74.53
VIT_01s0113g00500.t01	Wine grape	nucleus	73.9	73.68
KRH70802	Soybean	nucleus	73.7	71.48
KRH74941	Soybean	nucleus	73.3	71.23
GSMUA_Achr7P26400_001	Banana	cytosol	44.8	70.33
AT1G69440.1	Thale cress	cytosol	62.9	63.54
CDY28550	Canola	cytosol, plastid	61.1	62.6
CDY51501	Canola	nucleus	56.2	62.51
CDY07349	Canola	nucleus	61.0	61.99
Bra003999.1-P	Field mustard	nucleus	60.7	61.88
TraesCS2A01G414800.1	Wheat	nucleus	56.1	60.06
EER92100	Sorghum	cytosol	59.3	57.41
Zm00001d029573_P001	Maize	cytosol	59.2	57.36
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	57.2	56.52
Os03t0449200-00	Rice	nucleus	58.4	55.73
TraesCS2B01G434000.1	Wheat	nucleus	57.9	55.14
TraesCS2D01G412100.1	Wheat	plastid	57.6	51.57
Solyc12g006790.1.1	Tomato	nucleus	34.0	36.44
Solyc03g098280.2.1	Tomato	nucleus	35.4	36.12
Solyc09g082830.2.1	Tomato	nucleus	33.6	34.22
Solyc06g072300.2.1	Tomato	nucleus	36.0	34.16
Solyc06g074730.2.1	Tomato	nucleus	33.5	33.14
Solyc02g069270.2.1	Tomato	cytosol	32.2	32.96
Solyc02g069260.2.1	Tomato	nucleus	33.0	31.67
Solyc02g069280.2.1	Tomato	nucleus	31.5	31.53
Solyc01g096750.1.1	Tomato	nucleus	26.3	29.85
Solyc07g049500.2.1	Tomato	nucleus	26.9	29.79
Solyc06g073540.2.1	Tomato	nucleus	27.1	29.68
Solyc06g073530.1.1	Tomato	nucleus	26.2	28.98
Solyc01g008960.2.1	Tomato	nucleus	26.3	28.93
Solyc03g111760.2.1	Tomato	mitochondrion	23.3	25.44

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009791	GO:GO:0009987
GO:GO:0010050	GO:GO:0010267	GO:GO:0010492	GO:GO:0010599	GO:GO:0016246	GO:GO:0031047
GO:GO:0040029	GO:GO:0040034	GO:GO:0051607	GO:GO:0060145	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	EMBL:JX467714	UniProt:K4ATU0	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF9	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949
SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:Solyc01g010970.2	EnsemblPlants:Solyc01g010970.2.1
UniParc:UPI0002761EDB	SEG:seg	:	:	:	:

Description

AGO7 [Source:UniProtKB/TrEMBL;Acc:K4ATU0]

Coordinates

chr1:+:6612318..6616335

Molecular Weight (calculated)

114013.0 Da

IEP (calculated)

9.500

GRAVY (calculated)

-0.400

Length

1000 amino acids

Sequence
(BLAST)

001: MEHTENSNKC NSKSTTAKIC PNNNNNNNNN HYIAFGFHHN TNNNQYHETY PPLLPLPPLL PPLQLPFPQN HNFRSRTHLH KPSFNQNHPF LATPSDFKIQ
101: QISASKVLQR QNDVSKQKYG RRVRAAATTT ESVVVARRPD SGGVEGPVIS LLANHFLVQF DPSQRIFHYD VEISPHPSKD IARLIKKKLV EDHSVMLSGA
201: LPVYDGGRTI YSPIEFQNNK IEFYISLPIP SSGSNKSGEI VKLQKEGQQI KLFRVNIKLI SKFDGKELNS YLNKEGDDGG SPLPQEYLHA LDVVLRESPT
301: EKCITAGRSF YSSCMGGQKD IGGGAVALRG FFQSLRPTQQ GLALNVDFSV TAFHESIGVI TYLEKRLDFL HDISHRKTRG LTNEEKKEVE KALKNIRVFV
401: CHRETVQRYR IYSLTEEVTE NLCFQDRDGK ILRIVSYFKD HYNYDILYRN LPCLQISRSK PCYLPMELCM ICEGQKFLGK LSDDQTARIL KMGCQRPRER
501: KAIIDRVVTG LVGPTSGNHA SDFKLQISKE MTQLYGRILQ PPKLKLGDRG QVRNLIPSRH DRQWNFLDSH VFESTRVERW ALMSFGGTSD QKSHVPKFIN
601: QLCQRCEQLG IFLNKNTVLN PQFEPLHLLN NVKNLESKLN KLHRASFNNL QLVICVMERK HKGYADLKRI AETSIGIVTQ CCLYPNLGKI SSQFLANLAL
701: KINAKVGGCT VALYNSLPSQ IPRLFKHDGP VIFMGADVTH PHPLDDFSPS VAAVVGSVNW PAANKYVSRM RSQTHRQEII QDLSAMVGEI IDDFYEELLK
801: LPERIIFFRD GVSETQFLKV LKEELQAIRL ACSRFPGYKP PITFVVVQKR HHTRLFPCEL DPSTTKNTLF NENILPGTVV DTVITHPSEF DFYLCSHWGV
901: KGTSRPIHYH VLWDENQFTS DELQKLVYNL CYTFVRCTKP ISLVPPVYYA HLAAYRGRLY LERSDLSTLT RSSNISRAAP PKTTPLPKLT ENIKRLMFYC

Best Arabidopsis Sequence Match ( AT1G69440.1 )
(BLAST)

001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC

Arabidopsis Description

AGO7Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.