CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G69440.1	Thale cress	cytosol	86.48	85.25
CDY51501	Canola	nucleus	77.77	84.43
CDY07349	Canola	nucleus	84.84	84.15
GSMUA_Achr7P26400_001	Banana	cytosol	42.21	64.68
VIT_03s0038g00830.t01	Wine grape	nucleus	64.14	62.54
VIT_01s0113g00500.t01	Wine grape	nucleus	63.52	61.81
PGSC0003DMT400062439	Potato	nucleus	62.91	61.28
Solyc01g010970.2.1	Tomato	nucleus	62.6	61.1
KRH70802	Soybean	nucleus	63.93	60.52
KRH74941	Soybean	nucleus	63.73	60.45
TraesCS2A01G414800.1	Wheat	nucleus	53.18	55.57
Zm00001d029573_P001	Maize	cytosol	56.56	53.49
EER92100	Sorghum	cytosol	56.35	53.24
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	53.69	51.78
Os03t0449200-00	Rice	nucleus	55.53	51.72
TraesCS2B01G434000.1	Wheat	nucleus	54.0	50.19
TraesCS2D01G412100.1	Wheat	plastid	53.59	46.82
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	9.73	40.25
CDY72062	Canola	plastid	10.86	35.69
CDY70429	Canola	plastid	31.05	34.16
CDY04517	Canola	plastid	32.79	33.44
CDY22332	Canola	plastid	33.4	33.44
CDY04311	Canola	cytosol, nucleus, plastid	33.3	33.16
CDX94724	Canola	plastid	33.3	33.13
CDX71410	Canola	nucleus	32.17	32.98
CDY41831	Canola	nucleus	34.12	31.9
CDY68174	Canola	nucleus	34.32	31.84
CDY02373	Canola	nucleus	32.17	30.69
CDY25885	Canola	cytosol	31.45	30.4
CDY23683	Canola	cytosol, nucleus, plastid	33.5	30.11
CDX92417	Canola	nucleus	19.47	29.5
CDY55876	Canola	cytosol	30.64	28.89
CDX79495	Canola	nucleus	25.61	28.84
CDX84712	Canola	nucleus	25.41	28.6
CDY16587	Canola	nucleus	25.41	28.12
CDY09103	Canola	nucleus	25.92	27.92
CDY56413	Canola	nucleus	26.33	27.84
CDY04475	Canola	nucleus	26.23	27.74
CDX92406	Canola	nucleus	25.61	27.65
CDY48192	Canola	nucleus	26.02	27.55
CDX77061	Canola	nucleus	25.92	27.44
CDY59516	Canola	nucleus	25.1	27.04
CDX92405	Canola	nucleus	25.2	26.89
CDY16595	Canola	nucleus	22.34	23.7
CDY62055	Canola	nucleus	9.84	16.67

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	GO:A0A078GPV0	UniProt:A0A078GPV0
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N	EnsemblPlants:CDY28550	ProteinID:CDY28550	ProteinID:CDY28550.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSBRNA2T00040487001	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397
InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF9	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI0004EE4A45	SEG:seg	:	:	:

Description

BnaC02g19190DBnaC02g19190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPV0]

Coordinates

chrLK032222:-:75975..79308

Molecular Weight (calculated)

111588.0 Da

IEP (calculated)

9.589

GRAVY (calculated)

-0.447

Length

976 amino acids

Sequence
(BLAST)

001: MEEKAQSHHT TRHTLNSKSR TPLLRKPPPL YHVHTNPPPF PSSPQQNLSL VPSNLHSSYY YYYYCFYSQF HNTLPSLPLL PLPTDQRFFH PMTKALPLTP
101: VVERKHQQQP KTQVSEHRNI KVGSTGTATE AALVVAKRPD SGGHEGSVIY LLANHFLVKF DPSQKIYHYN VDISPNPSKE IARMIKQKLL ETEPRSFSGA
201: VPAFDGRKNI YSPMEFQEDR LEFFVNLPIP SCNTLMKCCD LREKLPQKKV DKLFRVNMRL VSKFDGKEQR KEGENWAPLP QEYIHALDVI LRENPMEKCT
301: SIGRSFYSTS MGGSKEIGGG AVGLRGFFQS LRQTQQGLAL NMDLSIAAFH ESIGVIAYLQ KKLGLLKDLS RNKGRELSLE ERREVEKEIK NIRVFVCHRE
401: TVQRYRVYGL TDEITERLWF PDRDGKQIRL VSYFKDHYGY EIQFKNLPCL QISRTRPCYL PMELCMICEG QKFLGKLSDD QAAKIMKMGC QKPNERKAII
501: DNVMAGPVGP SSGTQTREFN LEVSREMTLL KGRILQPPKL KHDRSRNLLE SRAFKGTRVE RWALMSIGGS PDQKSTIPKF INELTQKCEH LGVFLSKYTL
601: SSTFFEPSHI LNNTTLLESK LKDIQRAASN NLQLIICVME RKHKGYGDLK RIAETRIGVV TQCCLYTNIT KLSSQFVSNL ALKINAKIGG AMTELYNSIP
701: SHIPRLIRVD EPVIFMGADV THPHPFDDCS PSVAAVVGSI NWPEANRHVS RMRSQTHRQE IIQDLDLMVK ELLDDFYKAL NKLPNRIIFF RDGVSETQFK
801: KVLQEELQSI KAACSKFQGY YPTITFSVVQ KRHHTRLFRC GPDHDQNIPP GTVVDTVVTH PKEFDFYLCS HVGVKGTSRP THYHILWDES EFTSDELQRL
901: VYNLCYTFVR CKKPVSIVPP AYYAHLAAYR GRLYIERSSE ANGGSMNPSC VSRVGPPKTI PLPKLSDNVK NLMFYC

Best Arabidopsis Sequence Match ( AT1G69440.1 )
(BLAST)

001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC

Arabidopsis Description

AGO7Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.