Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92405 | Canola | nucleus | 83.26 | 83.72 |
| CDX92406 | Canola | nucleus | 75.11 | 76.44 |
| CDY59516 | Canola | nucleus | 75.22 | 76.38 |
| CDY72062 | Canola | plastid | 24.46 | 75.76 |
| CDY09103 | Canola | nucleus | 74.35 | 75.5 |
| CDX92417 | Canola | nucleus | 51.2 | 73.14 |
| AT5G21150.1 | Thale cress | nucleus | 69.02 | 70.87 |
| CDY16587 | Canola | nucleus | 66.52 | 69.39 |
| CDY04475 | Canola | nucleus | 57.83 | 57.64 |
| CDY56413 | Canola | nucleus | 57.72 | 57.53 |
| CDX77061 | Canola | nucleus | 57.39 | 57.27 |
| CDY48192 | Canola | nucleus | 57.39 | 57.27 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 55.76 | 56.07 |
| Os01t0275600-01 | Rice | nucleus | 54.89 | 55.86 |
| Zm00001d008249_P012 | Maize | nucleus | 54.24 | 55.44 |
| Zm00001d040429_P012 | Maize | nucleus | 54.24 | 55.38 |
| Os04t0151800-02 | Rice | nucleus | 54.57 | 55.1 |
| OQU86696 | Sorghum | nucleus | 53.48 | 54.67 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 54.35 | 54.59 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 54.35 | 54.23 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 54.35 | 52.97 |
| EES18816 | Sorghum | nucleus | 51.96 | 52.59 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 52.39 | 52.28 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 52.5 | 52.22 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 52.61 | 52.21 |
| CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 13.37 | 52.12 |
| Zm00001d039214_P025 | Maize | nucleus | 51.96 | 51.73 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 50.33 | 51.39 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 50.11 | 50.72 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 25.33 | 50.0 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 49.78 | 49.84 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 54.24 | 49.8 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 48.91 | 48.6 |
| Os01t0275200-00 | Rice | golgi, peroxisome, plastid | 24.46 | 48.18 |
| CDX84712 | Canola | nucleus | 45.11 | 47.87 |
| CDX79495 | Canola | nucleus | 45.11 | 47.87 |
| EES00570 | Sorghum | nucleus | 45.54 | 46.66 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 40.33 | 45.75 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 40.11 | 45.72 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 42.83 | 44.82 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 36.85 | 43.13 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 8.37 | 42.31 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 39.02 | 39.19 |
| CDY62055 | Canola | nucleus | 24.35 | 38.89 |
| PGSC0003DMT400039204 | Potato | cytosol | 6.2 | 38.0 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 24.24 | 37.29 |
| CDX94724 | Canola | plastid | 29.89 | 28.03 |
| CDX71410 | Canola | nucleus | 28.91 | 27.94 |
| CDY04517 | Canola | plastid | 29.02 | 27.9 |
| CDY22332 | Canola | plastid | 29.46 | 27.79 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 29.35 | 27.55 |
| CDY41831 | Canola | nucleus | 30.0 | 26.44 |
| CDY68174 | Canola | nucleus | 30.22 | 26.43 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 29.46 | 24.95 |
| CDY51501 | Canola | nucleus | 22.39 | 22.91 |
| CDY70429 | Canola | plastid | 21.85 | 22.66 |
| CDY28550 | Canola | cytosol, plastid | 23.7 | 22.34 |
| CDY07349 | Canola | nucleus | 23.8 | 22.26 |
| CDY25885 | Canola | cytosol | 22.61 | 20.59 |
| CDY02373 | Canola | nucleus | 22.61 | 20.33 |
| CDY55876 | Canola | cytosol | 22.07 | 19.61 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | GO:A0A078FQ72 | UniProt:A0A078FQ72 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaute_N | EnsemblPlants:CDY16595 | ProteinID:CDY16595 | ProteinID:CDY16595.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:GSBRNA2T00094403001 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 |
| PFAM:PF16486 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF20 |
| InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | UniParc:UPI0004EE888F | SEG:seg | : | : | : |
Description
BnaC09g36780DBnaC09g36780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ72]
Coordinates
chrLK032065:+:554636..560156
Molecular Weight (calculated)
103804.0 Da
IEP (calculated)
9.455
GRAVY (calculated)
-0.437
Length
920 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFDKGKGLP LPPPVVPSNL VPELEPIKKN TLLPMARRGS GTKGVKTHLL TNHFRVNFNN SNGHFFHCSV AITYEDGRPV EAKGIGRKIL EKVQETYRTD
101: LGSKYFAYDG EKTLFTVGAL PSNKMDFSVV LEDTPSSRNN TGNASPNESN DADRKRSRRP NRSKKFMVEI SYAARIPMQA IASALQGKET DYLQDAIRVL
201: DVILRQSAAR QGCLLVRQSF FHNDVQNFVH IGGGVTGVRN FHSSFRTTQG GLSLNIDTST TMVTQSILTG IRLDVLSRIL EYRLPLNREY KITGLSEERC
301: KDQMFTRNSK NEKGEVEEIQ TTVYKYFTEF RGIPLRYSGN FPCINVGKPK RPTYIPIEHC ELVSLQRYTK SLSSLQRASL VEKSRQRPPE RMASLTNGLK
401: KSNYNADLVL QDCGVSIGSN FTQVEGRVLP TPRLKVGNGE EFQPRDGRWN FNYKKLVEPA TVTRWVLVNF SARCDTKRLI SDLIRCGKMK GINVDPPYKV
501: VFQEDPYYRG APANIRVEKM FEQMQSELRK EGIEGKPKFI LCILAEKKNS LVYGNGEEFQ PRDGRWNFNY KNVEPPYKVV FQEDPDFRGA PANIRVQKMF
601: EQMQSELRKE GKPKFILCIL AEKKNSLVYG KLNCDAVYIA PTPKINDQYL TNVLLKINAK LGGLNSLLAM ERSPRAMMPL VTQVYTFIVG MDVSHGSPGQ
701: SDIPSVAAVV GSREWPLISK YRACVRTQSR KVEMIDNLFK PVTDENGKPV DEGIFWELLF DFYTSSGNRR PEHNIIFRDG VSESKFNQVL NIELDQMMQA
801: CKFVEENWEP KGETSKVNGT TRPTHYHVLY DEIGFSTDDL QELVHSLSYV YQRSTTAISV VAPVCYAHLA AAQMGTVMKF EDMSLSETSS THGGITTPGA
901: VPVPPMPKLN VNVASSMFFC
101: LGSKYFAYDG EKTLFTVGAL PSNKMDFSVV LEDTPSSRNN TGNASPNESN DADRKRSRRP NRSKKFMVEI SYAARIPMQA IASALQGKET DYLQDAIRVL
201: DVILRQSAAR QGCLLVRQSF FHNDVQNFVH IGGGVTGVRN FHSSFRTTQG GLSLNIDTST TMVTQSILTG IRLDVLSRIL EYRLPLNREY KITGLSEERC
301: KDQMFTRNSK NEKGEVEEIQ TTVYKYFTEF RGIPLRYSGN FPCINVGKPK RPTYIPIEHC ELVSLQRYTK SLSSLQRASL VEKSRQRPPE RMASLTNGLK
401: KSNYNADLVL QDCGVSIGSN FTQVEGRVLP TPRLKVGNGE EFQPRDGRWN FNYKKLVEPA TVTRWVLVNF SARCDTKRLI SDLIRCGKMK GINVDPPYKV
501: VFQEDPYYRG APANIRVEKM FEQMQSELRK EGIEGKPKFI LCILAEKKNS LVYGNGEEFQ PRDGRWNFNY KNVEPPYKVV FQEDPDFRGA PANIRVQKMF
601: EQMQSELRKE GKPKFILCIL AEKKNSLVYG KLNCDAVYIA PTPKINDQYL TNVLLKINAK LGGLNSLLAM ERSPRAMMPL VTQVYTFIVG MDVSHGSPGQ
701: SDIPSVAAVV GSREWPLISK YRACVRTQSR KVEMIDNLFK PVTDENGKPV DEGIFWELLF DFYTSSGNRR PEHNIIFRDG VSESKFNQVL NIELDQMMQA
801: CKFVEENWEP KGETSKVNGT TRPTHYHVLY DEIGFSTDDL QELVHSLSYV YQRSTTAISV VAPVCYAHLA AAQMGTVMKF EDMSLSETSS THGGITTPGA
901: VPVPPMPKLN VNVASSMFFC
001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
Arabidopsis Description
AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.