Factsheet for TraesCS7B01G437700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G324800.1
TraesCS1B01G337800.2
TraesCS1D01G325500.1
TraesCS6A01G123800.1
TraesCS6B01G094400.1
TraesCS6B01G151900.1
TraesCS6D01G113900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27040.1	TraesCS6A01G123800.1	AT2G40030.1	19410546
AT2G27040.1	TraesCS6B01G094400.1	AT2G40030.1	19410546
AT2G27040.1	TraesCS6B01G151900.1	AT2G40030.1	19410546
AT2G27040.1	TraesCS6D01G113900.1	AT2G40030.1	19410546
AT2G27040.1	TraesCS1A01G324800.1	AT5G04290.1	19410546
AT2G27040.1	TraesCS1B01G337800.2	AT5G04290.1	19410546
AT2G27040.1	TraesCS1D01G325500.1	AT5G04290.1	19410546

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G437900.1	Wheat	cytosol	90.33	98.39
TraesCS7A01G521000.1	Wheat	nucleus	83.62	90.63
TraesCS7B01G373400.1	Wheat	nucleus	61.32	68.58
PGSC0003DMT400070806	Potato	nucleus	21.62	65.07
HORVU7Hr1G107770.1	Barley	nucleus	42.09	61.87
CDY72062	Canola	plastid	20.59	60.94
EES00570	Sorghum	nucleus	59.27	58.02
PGSC0003DMT400039204	Potato	cytosol	9.67	56.67
Os01t0275200-00	Rice	golgi, peroxisome, plastid	29.69	55.89
GSMUA_Achr9P05150_001	Banana	nucleus	57.68	55.41
TraesCS1B01G480100.1	Wheat	nucleus	58.13	55.12
KRH73469	Soybean	nucleus	56.54	54.86
Solyc01g008960.2.1	Tomato	nucleus	56.66	54.79
VIT_06s0009g01200.t01	Wine grape	nucleus	56.88	54.76
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	58.7	54.66
KRH14678	Soybean	nucleus	56.31	54.64
PGSC0003DMT400058471	Potato	nucleus	56.43	54.57
Solyc06g073540.2.1	Tomato	nucleus	56.31	54.22
PGSC0003DMT400069459	Potato	nucleus	56.31	54.22
CDX92417	Canola	nucleus	39.59	54.04
Solyc01g096750.1.1	Tomato	nucleus	54.15	54.03
VIT_08s0040g00070.t01	Wine grape	nucleus	55.18	52.83
TraesCS7B01G450300.1	Wheat	nucleus	54.84	52.45
Solyc06g073530.1.1	Tomato	nucleus	53.92	52.43
VIT_13s0175g00140.t01	Wine grape	nucleus	52.79	52.43
CDY48192	Canola	nucleus	54.72	52.17
Bra034318.1-P	Field mustard	nucleus	54.61	52.06
AT2G27040.1	Thale cress	nucleus	54.72	52.06
KRG89867	Soybean	nucleus	55.97	51.95
CDX77061	Canola	nucleus	54.49	51.95
CDY04475	Canola	nucleus	54.38	51.79
CDY09103	Canola	nucleus	53.36	51.77
Bra020152.1-P	Field mustard	nucleus	53.24	51.66
CDY56413	Canola	nucleus	54.04	51.46
TraesCS7B01G450200.2	Wheat	nucleus	53.92	51.19
AT5G21150.1	Thale cress	nucleus	52.1	51.12
CDY16587	Canola	nucleus	51.19	51.02
TraesCS5B01G162300.1	Wheat	mitochondrion	52.1	51.0
Bra002361.1-P	Field mustard	nucleus	52.33	50.49
CDX92406	Canola	nucleus	51.54	50.11
CDX92405	Canola	nucleus	52.1	50.05
AT5G21030.2	Thale cress	cytosol	48.58	50.0
CDY59516	Canola	nucleus	51.42	49.89
Bra002360.1-P	Field mustard	nucleus	51.19	48.39
KRH56276	Soybean	cytosol	42.55	45.01
CDY16595	Canola	nucleus	44.82	42.83
TraesCS3B01G027100.1	Wheat	cytosol	7.28	41.83
Solyc03g111760.2.1	Tomato	mitochondrion	43.23	41.48
TraesCS3B01G135800.1	Wheat	cytosol	34.02	35.55
TraesCS4B01G026600.1	Wheat	cytosol	19.57	35.46
CDY62055	Canola	nucleus	23.09	35.24
TraesCS5B01G468000.1	Wheat	plastid	32.99	33.22
TraesCS7B01G256500.1	Wheat	cytosol	34.58	31.8
TraesCS3B01G287600.1	Wheat	nucleus	32.76	31.79
TraesCS5B01G454200.1	Wheat	cytosol	24.35	31.7
TraesCS6B01G206700.1	Wheat	plastid	33.45	31.01
TraesCS6B01G466700.1	Wheat	nucleus	35.61	30.9
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	29.47	30.51
TraesCS5B01G452500.1	Wheat	nucleus	31.17	30.04
TraesCS7B01G482100.1	Wheat	nucleus	34.58	29.46
TraesCS4B01G024000.1	Wheat	nucleus	33.9	29.1
TraesCS5B01G451400.2	Wheat	plastid	34.81	28.87
TraesCS6B01G270900.1	Wheat	nucleus	35.61	28.85
TraesCS2B01G421000.2	Wheat	nucleus	36.06	28.77
TraesCS2B01G195200.2	Wheat	nucleus	32.88	28.67
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	31.97	28.53
Bra002349.1-P	Field mustard	nucleus	49.94	25.81
TraesCS5B01G458100.1	Wheat	cytosol	26.17	24.21
TraesCS2B01G438600.1	Wheat	cytosol, nucleus, plastid	22.07	24.16
TraesCS2B01G434000.1	Wheat	nucleus	28.56	23.9
TraesCS2B01G439000.2	Wheat	nucleus, unclear	28.1	23.61
TraesCS2B01G438200.1	Wheat	nucleus	24.0	19.74

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF20	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163
SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS7B01G437700	EnsemblPlants:TraesCS7B01G437700.1	TIGR:cd02846	TIGR:cd04657
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:704087241..704092467

Molecular Weight (calculated)

98743.5 Da

IEP (calculated)

9.064

GRAVY (calculated)

-0.393

Length

879 amino acids

Sequence
(BLAST)

001: MSHTEKGDRS KTATPRRLPI TRPPQLGKRG ETIQLLMNHF KVSGNPTHDF FYHYNVDLKY EDDHPVTGQG VCRKVMKQLH ETYASLLQGK QFANDGDKSL
101: FTSGPLPFAS NVFDVVVDGD ASSRKIATSQ SPGGDGSPGP SDKKRMKRAG LDKRIKVDIT FTAKVPISAI GHVLGGGQDT ENSQEVLRVL DIILRQNAAR
201: QNCLLVRQSF FRRDSDYVKL GGRVLGCQGF HSSVRPTQSG LLLNVDLSTT KVVEPGPVIV FLLSNQGVTD TSSIDWGKAK RALNKLRIET THTKAEFRIV
301: GLSENSCYNQ TFPLKQKDGN GTVDVTVYDY FMDRWSMKLE KSAHMPCLNV GKPNRPTYLP LEVCRLVPLQ RYKRSLSMSQ RSKLLEASRQ RPDQRMSKLH
401: GELRANDYDS EPMMRECGIS IVPDFTQVQG RVLEAPQLSV ADGRQLYTPN GRWNFNKDGF IQPIEFTKIW GVVNFSTRRD VEDLVFRLFQ CGDKKGIKMD
501: KYTAVIQERH QMKHESPAKR VEDMFHQINR VFGENNPEFL LCVLPEKNCD IYGPWKRECL AQRGIVTQCL VPPPNAKDQY LTNVLLKINA KLGGLNSLLK
601: KEIARAIPHV SRIPTIIFGM DVSHGSPGRD VPSVAAVVSS LEWPIISKYR ASVCTLPPRQ EMIKTLFKQD GDTDHGLIKD SLVAFLGKDN KLKPEQIIIF
701: RDGVSESQFD QVLNDELGQI MEACKFFGDD WFPKFTVIVA QKNHHTRFFL RNGVNNVPPG TVVDGVICHP RNYDFYMCAH AGIIGTTRPT HYHVLHDEIG
801: FSTDDLQELV HSLSYTYQRS TTAISVVAPI YYAHLAAAQV AKFTRLDDGM SETSSQAEAA PVPELPRLHP NVASSMFFC

Best Arabidopsis Sequence Match ( AT2G27040.1 )
(BLAST)

001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC

Arabidopsis Description

AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.