Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48192 | Canola | nucleus | 88.64 | 88.83 |
| Bra034318.1-P | Field mustard | nucleus | 88.53 | 88.72 |
| CDY04475 | Canola | nucleus | 88.53 | 88.62 |
| CDY56413 | Canola | nucleus | 88.31 | 88.41 |
| CDX77061 | Canola | nucleus | 88.2 | 88.39 |
| Solyc01g008960.2.1 | Tomato | nucleus | 72.73 | 73.93 |
| KRH14678 | Soybean | nucleus | 72.4 | 73.84 |
| PGSC0003DMT400058471 | Potato | nucleus | 72.62 | 73.82 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 72.84 | 73.71 |
| KRH73469 | Soybean | nucleus | 71.86 | 73.29 |
| PGSC0003DMT400069459 | Potato | nucleus | 72.29 | 73.17 |
| Solyc06g073540.2.1 | Tomato | nucleus | 71.97 | 72.84 |
| KRG89867 | Soybean | nucleus | 70.35 | 68.64 |
| Solyc06g073530.1.1 | Tomato | nucleus | 66.13 | 67.59 |
| AT5G21150.1 | Thale cress | nucleus | 65.48 | 67.52 |
| Zm00001d040429_P012 | Maize | nucleus | 65.69 | 67.37 |
| Os01t0275600-01 | Rice | nucleus | 65.91 | 67.37 |
| Zm00001d008249_P012 | Maize | nucleus | 65.37 | 67.11 |
| GSMUA_Achr9P05150_001 | Banana | nucleus | 66.23 | 66.89 |
| OQU86696 | Sorghum | nucleus | 64.94 | 66.67 |
| Os04t0151800-02 | Rice | nucleus | 65.26 | 66.19 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 64.83 | 64.97 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 64.39 | 64.96 |
| EES18816 | Sorghum | nucleus | 63.2 | 64.25 |
| AT5G21030.2 | Thale cress | cytosol | 58.55 | 63.35 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 63.1 | 63.23 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 64.5 | 63.14 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 31.82 | 63.09 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 63.1 | 63.03 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 63.1 | 62.89 |
| Zm00001d039214_P025 | Maize | nucleus | 62.77 | 62.77 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 59.96 | 61.49 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 60.17 | 61.17 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 59.63 | 59.96 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 64.29 | 59.28 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 57.68 | 57.56 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 49.57 | 56.47 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 48.92 | 56.01 |
| Os01t0275200-00 | Rice | golgi, peroxisome, plastid | 27.92 | 55.25 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 52.06 | 54.72 |
| CDY62055 | Canola | nucleus | 33.87 | 54.34 |
| EES00570 | Sorghum | nucleus | 52.6 | 54.12 |
| AT2G32940.1 | Thale cress | nucleus | 50.87 | 53.53 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 43.51 | 51.15 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 9.42 | 47.8 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 29.33 | 45.32 |
| AT5G43810.3 | Thale cress | nucleus | 33.77 | 31.58 |
| AT2G27880.1 | Thale cress | cytosol, nucleus, plastid | 33.98 | 31.49 |
| AT1G48410.2 | Thale cress | nucleus | 34.52 | 30.38 |
| AT1G69440.1 | Thale cress | cytosol | 28.9 | 26.97 |
| AT1G31280.1 | Thale cress | nucleus | 26.19 | 23.87 |
| AT1G31290.1 | Thale cress | nucleus | 26.08 | 20.18 |
Protein Annotations
| MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | EntrezGene:817246 | ProteinID:AAC77862.2 |
| ProteinID:AEC07928.1 | ProteinID:AEC07929.1 | Symbol:AGO4 | ArrayExpress:AT2G27040 | EnsemblPlantsGene:AT2G27040 | RefSeq:AT2G27040 |
| TAIR:AT2G27040 | RefSeq:AT2G27040-TAIR-G | EnsemblPlants:AT2G27040.1 | TAIR:AT2G27040.1 | EMBL:AY035081 | EMBL:AY051033 |
| InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | Unigene:At.13165 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003682 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004521 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005654 | GO:GO:0005719 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006306 |
| GO:GO:0006342 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006412 | GO:GO:0006417 | GO:GO:0006464 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009816 | GO:GO:0009987 | GO:GO:0015030 | GO:GO:0016032 | GO:GO:0016043 |
| GO:GO:0016458 | GO:GO:0016787 | GO:GO:0019048 | GO:GO:0019538 | GO:GO:0030422 | GO:GO:0030529 |
| GO:GO:0031047 | GO:GO:0031048 | GO:GO:0035197 | GO:GO:0035198 | GO:GO:0040029 | GO:GO:0051567 |
| GO:GO:0051607 | GO:GO:0070919 | GO:GO:0080188 | GO:GO:0090502 | InterPro:IPR003100 | InterPro:IPR003165 |
| InterPro:IPR036397 | RefSeq:NP_001189613.1 | RefSeq:NP_565633.1 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005597 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF20 | InterPro:Piwi |
| UniProt:Q9ZVD5 | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | UniParc:UPI00000A24DA | SEG:seg | : | : | : |
Description
AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
Coordinates
chr2:-:11536502..11542391
Molecular Weight (calculated)
102846.0 Da
IEP (calculated)
9.193
GRAVY (calculated)
-0.403
Length
924 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.