Factsheet for AT1G31290.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G31280.1	Thale cress	nucleus	60.55	71.3
CDY70429	Canola	plastid	51.84	69.79
CDY02373	Canola	nucleus	59.55	69.5
Bra023172.1-P	Field mustard	nucleus	59.97	69.05
CDY55876	Canola	cytosol	59.8	68.99
Bra040815.1-P	Field mustard	cytosol	57.45	67.99
CDY25885	Canola	cytosol	57.12	67.52
VIT_10s0042g01180.t01	Wine grape	nucleus, plastid	38.53	48.52
KRH36727	Soybean	nucleus	18.09	47.68
PGSC0003DMT400054667	Potato	cytosol	29.15	47.67
VIT_10s0042g01150.t01	Wine grape	nucleus	38.94	47.5
KRG89432	Soybean	nucleus	38.27	47.31
VIT_10s0042g01200.t01	Wine grape	nucleus	38.27	45.98
Solyc02g069270.2.1	Tomato	cytosol	37.02	45.24
Solyc02g069260.2.1	Tomato	nucleus	38.36	43.95
PGSC0003DMT400054669	Potato	cytosol	38.53	43.77
KRH11732	Soybean	nucleus	36.93	42.53
Solyc02g069280.2.1	Tomato	nucleus	34.67	41.44
Zm00001d002316_P003	Maize	plastid	28.64	39.95
Zm00001d026300_P001	Maize	nucleus	29.4	39.84
PGSC0003DMT400054661	Potato	nucleus	32.58	39.69
Os04t0615700-01	Rice	nucleus, plasma membrane	33.92	39.17
KXG27113	Sorghum	nucleus	34.17	37.36
HORVU2Hr1G098650.1	Barley	nucleus	32.66	37.25
TraesCS2D01G417000.1	Wheat	nucleus	32.66	37.21
TraesCS2B01G439000.2	Wheat	nucleus, unclear	32.5	37.09
TraesCS2A01G419900.1	Wheat	nucleus	32.58	37.08
TraesCS2A01G419800.2	Wheat	nucleus	21.02	35.6
TraesCS2B01G438600.1	Wheat	cytosol, nucleus, plastid	23.12	34.37
TraesCS2B01G438200.1	Wheat	nucleus	29.56	33.02
TraesCS2D01G416500.1	Wheat	nucleus	28.73	32.45
TraesCS2A01G419500.1	Wheat	nucleus	28.89	32.39
HORVU2Hr1G098620.2	Barley	nucleus	27.3	31.99
AT1G69440.1	Thale cress	cytosol	25.71	31.01
AT1G48410.2	Thale cress	nucleus	26.38	30.0
AT5G43810.3	Thale cress	nucleus	24.29	29.35
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	24.46	29.29
AT2G32940.1	Thale cress	nucleus	21.11	28.7
AT5G21150.1	Thale cress	nucleus	20.69	27.57
AT5G21030.2	Thale cress	cytosol	19.6	27.4
AT2G27040.1	Thale cress	nucleus	20.18	26.08
Os04t0615800-01	Rice	nucleus	0.25	0.57

Protein Annotations

MapMan:12.5.1.15.2	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EntrezGene:840017	ProteinID:AAF24586.1
ProteinID:AEE31336.1	Symbol:AGO3	ArrayExpress:AT1G31290	EnsemblPlantsGene:AT1G31290	RefSeq:AT1G31290	TAIR:AT1G31290
RefSeq:AT1G31290-TAIR-G	EnsemblPlants:AT1G31290.1	TAIR:AT1G31290.1	InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N
Unigene:At.51183	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0006412	GO:GO:0006417	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529
GO:GO:0031047	GO:GO:0051607	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	RefSeq:NP_174414.1
InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486
PFAM:PF16488	PO:PO:0001185	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0009009	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0025281	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF4	InterPro:Piwi	UniProt:Q9SHF2	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098
UniParc:UPI00000AB3B3	SEG:seg	:	:	:	:

Description

AGO3Protein argonaute 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF2]

Coordinates

chr1:+:11188293..11192573

Molecular Weight (calculated)

129192.0 Da

IEP (calculated)

9.776

GRAVY (calculated)

-0.502

Length

1194 amino acids

Sequence
(BLAST)

0001: MDRGGYRGGR GDGRGRGGGG DRGRGYSGRG DGRGRGGDGD RGYSGRGDGH GRGGGGDRGR GYSGRGDGRG RGGGGDRGRG YSGRGDGHGR GGGGDRGRGY
0101: SGRGRGFVQD RDGGWVNPGQ SSGGHVRGRG TQLQQPPPQE VPPSSSQAQV SQGVAPGDVG QGGVGDVGRD GVGDVGRDGV GDVGQGGVGD VGQVGVGDVG
0201: QGGVGDVGQG GVGDVGRDGV GDVGRDGVGD VGRGGVGDRG QSQSGLSSGH FGRGTQLQQP QPQAVSQSSS QGQVSQSFAT GGVGLGAWAR KPQLFSDSTV
0301: LPSSSSSNVV ASHTASGSQV MTPKPSSSDK KEPVKRPDKG GNIKVKGVIN LSVNHFRVSF STESVIRHYD VDIKGENSSK KISRFELAMV KEKLFKDNND
0401: FPNAMTAYDG QKNIFSAVEL PTGSFKVDFS ETEEIMRGRS YTFIIKQVKE LKLLDLQAYI DGRSTFIPRD VLQGMDVVMK EHPSKRMITV GKRFFSTRLE
0501: IDFGYGVGAA KGFHHTLKPT VQGLSLCLNS SLLAFRKAIS VIEYLKLYFG WRNIRQFKNC RPDDVVQELI GLKVTVDHRK TKQKFIIMGL SKDDTKDIKF
0601: DFIDHAGNQP PRKISIVEYF KEKYGRDIDH KDIPCLNLGK KGRENFVPME FCNLVEGQIF PKEKLYRDSA AWLKELSLVT PQQRLENINK MIKSSDGPRG
0701: GDIIGNFGLR VDPNMTTVEG RVLEAPTLKL TDRRGNPIHE KLMSESNQWN LTTKGVTKGS IIKHWAVLDF TASESLKKKM PGYFVNKLIE RCKGLGMQME
0801: APIVCKTSSM ETLYDGNALE ELLRSVIDEA SHNHGGACPT LVLCAMTGKH DGYKTLKWIA ETKLGLVTQC FLTISAIKGE TVSDQYLANL ALKINAKVGG
0901: TNVELVDNIF SFFKKEDKVM FIGADVNHPA AHDNMSPSIV AVVGTLNWPE ANRYAARVKA QSHRKEEIQG FGETCWELIE AHSQAPEKRP NKIVIFRDGV
1001: SDGQFDMVLN VELQNVKDVF AKVGYNPQIT VIVAQKRHQT RFFPATTSKD GRAKGNVPSG TVVDTTIIHP FEYDFYLCSQ HGAIGTSKPT HYYVLSDEIG
1101: FNSNQIQKLI FDLCFTFTRC TKPVALVPPV SYADKAASRG RVYYEASLMK KNSKQSRGAS SSSASVASSS SSVTMEDKEI FKVHAGIENF MFFV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.