CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11732	Soybean	nucleus	88.96	38.86
KRG99173	Soybean	cytosol	11.04	32.05
PGSC0003DMT400054667	Potato	cytosol	50.33	31.23
KRG89432	Soybean	nucleus	64.9	30.43
VIT_10s0042g01150.t01	Wine grape	nucleus	56.29	26.05
VIT_10s0042g01180.t01	Wine grape	nucleus, plastid	54.3	25.95
VIT_10s0042g01200.t01	Wine grape	nucleus	55.85	25.45
TraesCS2A01G419800.2	Wheat	nucleus	39.07	25.11
Zm00001d002316_P003	Maize	plastid	45.25	23.95
Zm00001d026300_P001	Maize	nucleus	46.14	23.72
Solyc02g069270.2.1	Tomato	cytosol	50.33	23.34
CDY70429	Canola	plastid	45.47	23.22
TraesCS2B01G438600.1	Wheat	cytosol, nucleus, plastid	40.62	22.91
Solyc02g069280.2.1	Tomato	nucleus	50.33	22.82
Solyc02g069260.2.1	Tomato	nucleus	50.99	22.17
PGSC0003DMT400054669	Potato	cytosol	50.99	21.98
Bra040815.1-P	Field mustard	cytosol	46.8	21.01
AT1G31280.1	Thale cress	nucleus	47.02	21.01
CDY25885	Canola	cytosol	46.8	20.99
CDY55876	Canola	cytosol	47.02	20.58
Bra023172.1-P	Field mustard	nucleus	46.58	20.35
CDY02373	Canola	nucleus	45.92	20.33
Os04t0615700-01	Rice	nucleus, plasma membrane	44.81	19.63
TraesCS2B01G439000.2	Wheat	nucleus, unclear	45.25	19.6
PGSC0003DMT400054661	Potato	nucleus	42.38	19.59
TraesCS2D01G417000.1	Wheat	nucleus	45.25	19.56
TraesCS2A01G419900.1	Wheat	nucleus	45.03	19.45
HORVU2Hr1G098650.1	Barley	nucleus	44.81	19.39
KXG27113	Sorghum	nucleus	45.92	19.05
HORVU2Hr1G098620.2	Barley	nucleus	41.28	18.35
AT1G31290.1	Thale cress	nucleus	47.68	18.09
TraesCS2B01G438200.1	Wheat	nucleus	41.5	17.59
KRH70802	Soybean	nucleus	39.74	17.46
TraesCS2D01G416500.1	Wheat	nucleus	40.4	17.31
KRH74941	Soybean	nucleus	39.07	17.2
TraesCS2A01G419500.1	Wheat	nucleus	39.74	16.9
KRH03770	Soybean	nucleus	30.91	15.5
KRH63036	Soybean	cytosol	30.91	15.4
KRH54842	Soybean	nucleus	30.91	15.4
KRH25139	Soybean	plastid	32.67	15.4
KRH56656	Soybean	cytosol	30.68	15.31
KRG91384	Soybean	cytosol	31.13	14.48
KRH31645	Soybean	nucleus	30.24	14.44
KRG89867	Soybean	nucleus	30.02	14.36
KRH69078	Soybean	cytosol	30.68	14.3
KRH35431	Soybean	cytosol	30.68	14.27
KRH14678	Soybean	nucleus	28.26	14.13
KRH73469	Soybean	nucleus	28.26	14.13
KRH09472	Soybean	nucleus	31.79	13.68
KRH38925	Soybean	endoplasmic reticulum	31.79	13.61
KRH30536	Soybean	plastid	26.71	13.6
KRH20672	Soybean	nucleus	27.15	13.47
KRH56276	Soybean	cytosol	22.08	12.03
Os04t0615800-01	Rice	nucleus	0.44	0.38

Protein Annotations

Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A0R0I2I5	EMBL:ACUP02005389	EnsemblPlantsGene:GLYMA_09G020200
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR003165	InterPro:IPR036397	EnsemblPlants:KRH36727
ProteinID:KRH36727	ProteinID:KRH36727.1	PFAM:PF02171	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF4
InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SUPFAM:SSF53098	UniParc:UPI0006EDDD23
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:1591232..1592679

Molecular Weight (calculated)

51687.5 Da

IEP (calculated)

9.303

GRAVY (calculated)

-0.242

Length

453 amino acids

Sequence
(BLAST)

001: MSSFGSGDLI QNFGMSVNTS ITTIVGRVLG SPELKLGDPN RKIIKLTVDM EKCHWNLSGR SMVEGKPIEY WGILDFTSCG SYKYKLRGKE FIQKLIGKYK
101: KLGIYMQEPI WYEESSMKIL ASYDLLSELL EKINNICKYN QAHLQLLLCV MAKKSPGYKY LKWISETKLG IVTQCCLSNS ANEGEDKFYT NLALKINAKL
201: GGSNVELRVD VNHPGYQDTK SPSITAAVAT VNWPATNRYA ARVFPQYNRS EKILNFGDVC LELVACYRRM NGVRPERIVI RDGVSEYQFD MVLNEELLDL
301: KRVFQGVNYF PTITLIVAQK RHQTRFFPVG ISCRQQLWTQ NYYGNLGTSK PTHYHVLWDK HKFTSDELQK LIYEMCFTFA KCTKPVSLVP SVYYVDLAVY
401: RGRLYREARI GMQSPKSTAS SSSKDASSAS RTASFELGFY TLHADLENIM FLI

Best Arabidopsis Sequence Match ( AT1G31280.1 )
(BLAST)

0001: MERGGYRGGR GDGRGRGGRG YGGGGGGGEQ GRDRGYGGGE QGRGRGSERG GGNRGQGRGE QQDFRSQSQR GPPPGHGGRG TTQFQQPRPQ VAPQPSQAPA
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV

Arabidopsis Description

AGO2Protein argonaute 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.