CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070806	Potato	nucleus	18.41	52.4
Solyc01g096750.1.1	Tomato	nucleus	55.23	52.1
Zm00001d040429_P012	Maize	nucleus	55.48	51.17
KRH73469	Soybean	nucleus	55.23	50.66
Zm00001d008249_P012	Maize	nucleus	54.75	50.56
KRH14678	Soybean	nucleus	55.11	50.55
OQU86696	Sorghum	nucleus	54.51	50.33
Os04t0151800-02	Rice	nucleus	54.87	50.05
GSMUA_Achr9P05150_001	Banana	nucleus	54.99	49.95
Os01t0275600-01	Rice	nucleus	54.03	49.67
Os01t0275200-00	Rice	golgi, peroxisome, plastid	27.56	49.04
TraesCS3A01G188400.1	Wheat	nucleus	53.91	48.91
HORVU3Hr1G038830.1	Barley	nucleus	54.03	48.7
EES18816	Sorghum	nucleus	52.59	48.07
VIT_13s0175g00140.t01	Wine grape	nucleus	51.14	48.02
KRG89867	Soybean	nucleus	54.63	47.94
TraesCS7D01G458800.1	Wheat	nucleus	26.84	47.85
Zm00001d039214_P025	Maize	nucleus	52.95	47.62
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	53.91	47.46
TraesCS1D01G453600.1	Wheat	nucleus	52.11	46.96
TraesCS1A01G445500.1	Wheat	golgi, unclear	52.11	46.81
TraesCS1B01G480100.1	Wheat	nucleus	52.11	46.71
TraesCS7A01G521000.1	Wheat	nucleus	45.13	46.24
TraesCS7B01G437900.1	Wheat	cytosol	44.89	46.22
TraesCS7A01G533100.1	Wheat	cytosol	50.06	46.17
TraesCS7D01G520400.1	Wheat	nucleus	50.18	45.87
TraesCS3D01G191600.5	Wheat	nucleus	53.79	44.61
TraesCS7B01G450300.1	Wheat	nucleus	48.62	43.96
KRH20672	Soybean	nucleus	47.77	43.48
TraesCS7B01G373400.1	Wheat	nucleus	40.91	43.26
EES00570	Sorghum	nucleus	46.69	43.21
KRG99173	Soybean	cytosol	8.06	42.95
TraesCS7B01G437700.1	Wheat	nucleus	45.01	42.55
TraesCS7B01G450200.2	Wheat	nucleus	47.05	42.22
HORVU7Hr1G107770.1	Barley	nucleus	27.56	38.29
TraesCS7D01G458900.1	Wheat	mitochondrion	6.02	27.47
KRH63036	Soybean	cytosol	29.24	26.73
KRH54842	Soybean	nucleus	28.88	26.4
KRH03770	Soybean	nucleus	28.52	26.25
KRH56656	Soybean	cytosol	28.64	26.21
KRH30536	Soybean	plastid	28.04	26.18
KRH35431	Soybean	cytosol	29.72	25.36
KRG91384	Soybean	cytosol	29.72	25.36
KRH69078	Soybean	cytosol	29.24	25.0
KRH25139	Soybean	plastid	28.88	24.97
KRH31645	Soybean	nucleus	28.28	24.76
KRH09472	Soybean	nucleus	30.08	23.74
KRH38925	Soybean	endoplasmic reticulum	30.08	23.63
KRH36727	Soybean	nucleus	12.03	22.08
KRG89432	Soybean	nucleus	23.35	20.08
KRH70802	Soybean	nucleus	23.71	19.11
KRH74941	Soybean	nucleus	23.35	18.85
KRH11732	Soybean	nucleus	22.86	18.32

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	UniProt:A0A0R0JXM9	EMBL:ACUP02004108
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N	EnsemblPlantsGene:GLYMA_06G314500	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397
EnsemblPlants:KRH56276	ProteinID:KRH56276	ProteinID:KRH56276.1	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF65	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	TMHMM:TMhelix	UniParc:UPI0006EDAC1B	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:50339770..50345122

Molecular Weight (calculated)

94619.8 Da

IEP (calculated)

10.163

GRAVY (calculated)

-0.313

Length

831 amino acids

Sequence
(BLAST)

001: MSFAYDGEKS LFTLGPLASQ RLQYPVVLED VSSRRVGKNG NPAESPKGGY TKRMRIRHQF RPKTINVDIK YAAKIPLQAI EDALRGRDSE KSQEAVRVLD
101: IILRQHSANQ GYLLVRQSFF HDNRRTCTDI GGGVQGCRGF HSSFRVTQGG LSLNMDVTTT MIVKPGPVVD FLLQNQSVQN PNYIDWTKAK RMLKNLRIRA
201: NGVEFKISGL SDNTCRNQKF LLRQKGTNGE VQEREITVHD YFTRQKLIGL NYSADMPCIN VGKPKRPSYF PIELCEMVSL QRYTKALTNL QRAQLVEKTR
301: QKPQVRRQAL EDALRSSRYD DEPMLRSSGI TIEPNFVRLV GRVLEPPKLI VGGEKSIIPR NGRWNFNNKK LYEPLMIGRW AIVNFSSRCD TRLLIELIRR
401: CAAAKGMTMS NSLFDKVIEE DGCFIREPPN VRVERMYAKL RTTLPHEKPH FLLCILPEKK NSDIYGPWKK KSLVEEGIVT QCIAPTKIND QYITNVLLKI
501: NAKYGGMNSY LSVELCNSIP FVSAVPTLIL GMDVSHGSPG RSDVPSIAAV VSSRCWPQIS RYRASVRTQS SKVEMIQSLF KPVANTNKDE GIIREVLLDF
601: EITSFKRKPQ QIIIFRDGVS ESQFNQVLNI ELSQIIEACK HLDEKWDPKF TLIIAQKNHH TRFFQANARD QTNVPPGTVI DNTVCHPKNN DFYLCAQAGM
701: ILCHFGQPLS PFGHGGIHRR DPPGTPLRHR RGPGPLRRHL GGREPGVPWF PLLSPLTSNI EMCISHIGWW WVSIFFVFFI LISRLIFFFF VLDSVATVVG
801: SRYWLLVSFL VLFGSRKDEE DKVTKWGFTD G

Best Arabidopsis Sequence Match ( AT2G27040.1 )
(BLAST)

001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC

Arabidopsis Description

AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.