CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25139	Soybean	plastid	86.29	79.92
KRG99173	Soybean	cytosol	11.69	66.67
EER90726	Sorghum	cytosol	52.47	55.01
CDY04517	Canola	plastid	58.31	54.23
TraesCS4B01G026600.1	Wheat	cytosol	29.55	54.23
CDX71410	Canola	nucleus	57.87	54.1
TraesCS5A01G446000.1	Wheat	cytosol	51.57	54.06
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	27.75	54.05
TraesCS5B01G454200.1	Wheat	cytosol	40.9	53.93
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	62.36	53.78
Bra011993.1-P	Field mustard	plastid	58.31	53.73
TraesCS4D01G024100.1	Wheat	plastid	51.01	52.98
TraesCS4A01G288300.1	Wheat	plastid	50.9	52.86
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	13.71	52.81
OQU91198	Sorghum	nucleus	43.48	52.09
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	49.33	52.08
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	57.98	51.76
TraesCS5B01G468000.1	Wheat	plastid	50.67	51.66
OQU88608	Sorghum	plastid	51.12	51.65
Zm00001d018436_P001	Maize	cytosol	7.08	51.64
Zm00001d032611_P002	Maize	vacuole	21.46	51.34
OQU91197	Sorghum	plastid	50.56	50.91
TraesCS5D01G454600.1	Wheat	cytosol	42.25	50.74
TraesCS4D01G024300.1	Wheat	cytosol	31.24	50.55
TraesCS3B01G287600.1	Wheat	nucleus	51.01	50.11
TraesCS4A01G288000.1	Wheat	cytosol	39.55	49.09
Zm00001d009158_P003	Maize	golgi	23.93	48.74
TraesCS5B01G452500.1	Wheat	nucleus	49.78	48.57
KRH63036	Soybean	cytosol	49.55	48.51
KRH03770	Soybean	nucleus	49.1	48.39
KRH56656	Soybean	cytosol	49.33	48.35
KRH54842	Soybean	nucleus	49.33	48.29
Zm00001d036886_P001	Maize	plastid	12.25	48.23
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	53.37	48.22
TraesCS2B01G195200.2	Wheat	nucleus	53.93	47.62
Zm00001d015926_P001	Maize	nucleus	12.02	47.56
KRH31645	Soybean	nucleus	50.56	47.42
Os03t0800200-01	Rice	plasma membrane	56.07	47.16
HORVU2Hr1G045050.1	Barley	cytosol, mitochondrion, plastid	10.79	47.06
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	54.04	46.93
KRH69078	Soybean	cytosol	51.24	46.91
KRH35431	Soybean	cytosol	51.12	46.71
TraesCS2D01G176500.1	Wheat	golgi, unclear	54.38	46.67
KRG91384	Soybean	cytosol	51.01	46.61
Solyc06g074730.2.1	Tomato	nucleus	52.92	46.59
TraesCS2A01G168900.1	Wheat	cytosol	53.93	46.29
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	54.61	46.15
Os03t0682600-00	Rice	nucleus	38.54	45.92
TraesCS5B01G451400.2	Wheat	plastid	54.61	45.85
Zm00001d025691_P001	Maize	mitochondrion	10.0	45.64
KRH09472	Soybean	nucleus	53.93	45.58
KRH38925	Soybean	endoplasmic reticulum	53.71	45.18
TraesCS4B01G024000.1	Wheat	nucleus	50.79	44.14
Zm00001d013063_P001	Maize	nucleus	49.55	43.66
HORVU4Hr1G004030.1	Barley	mitochondrion	50.67	43.66
Zm00001d013542_P003	Maize	nucleus	50.79	42.84
Zm00001d007786_P001	Maize	nucleus	49.66	42.83
Os07t0188000-01	Rice	nucleus	50.56	42.78
GSMUA_Achr6P04510_001	Banana	nucleus	55.62	40.02
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	15.96	39.55
TraesCS7D01G061600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	23.37	39.47
TraesCS7A01G067500.2	Wheat	cytosol	37.42	38.99
Zm00001d033518_P001	Maize	nucleus	51.46	38.58
TraesCS5B01G458100.1	Wheat	cytosol	37.64	35.26
Os02t0616300-00	Rice	vacuole	13.03	35.05
TraesCS5D01G192700.2	Wheat	nucleus	35.73	33.72
KRH14678	Soybean	nucleus	31.91	31.35
KRH73469	Soybean	nucleus	31.57	31.02
Zm00001d039440_P001	Maize	cytosol	8.43	30.74
KRG89867	Soybean	nucleus	32.13	30.2
KRH70802	Soybean	nucleus	34.83	30.07
KRH74941	Soybean	nucleus	34.49	29.83
KRH20672	Soybean	nucleus	30.56	29.79
KRH56276	Soybean	cytosol	26.18	28.04
EER93271	Sorghum	cytosol	31.35	27.57
KRG89432	Soybean	nucleus	29.55	27.23
KRH36727	Soybean	nucleus	13.6	26.71
KRH11732	Soybean	nucleus	30.22	25.94
Zm00001d035554_P001	Maize	plastid	14.27	25.25
Os03t0789500-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	EMBL:ACUP02007034	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlantsGene:GLYMA_11G190900	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047
InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:K7LQ94	ProteinID:KRH30535.1	EnsemblPlants:KRH30536
ProteinID:KRH30536	ProteinID:KRH30536.1	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822
PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949
SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000296DA22	SEG:seg

Description

hypothetical protein

Coordinates

chr11:-:26361722..26367787

Molecular Weight (calculated)

99589.8 Da

IEP (calculated)

10.075

GRAVY (calculated)

-0.416

Length

890 amino acids

Sequence
(BLAST)

001: MSRRGGSKQQ PDSRHPAPPS AAPSPAGRGR GRGRGEFSSV PAPSPVNAPS APPPASTIGV PSGAAPVRAA SPSPAAESLT SAVEKQLTLQ PSAPSSTKAV
101: RFSERPGFGL VGKKIKVRAN HFQVKVAEQD LFHYDVSINP EINSKKVCRD VMTLLVQAHR EKFLGNRIPA YDGRKSLFTA GPLPFESKDF VIVLKDEDEP
201: GSSSSAPARK KREREFRVTI RFASRTDLHH LGQFLRRRQL DCPYETIQAL DVVLRATPSE RFDVVGRSFF SPFLGKPGTL GSGTEYWRGY YQSLRPTQMG
301: LSLNIDVSAR AFYEAIPVID FIQIHFRLNP SKPLPDQDRI KLKRALRGIK VEVNHGKNLR RYKITGVTKE PLRELMFTLD DKRTKSSVVQ YFHEKYNIVL
401: KHTHLPALQA GSDSKPIFLP VELCQIVAGQ RYTKRLNEEQ VTNLLRATCQ RPHDRENSIK QVVKQSNFST DKFVCHFGIQ VKEEPALLDA RVLPPPMLKY
501: HGTGRESCVQ PRTGQWNMID KKMVNGGAVQ HWTCLNFSGK TNRGLAASFC QELAKMCNNK GMRFNLDPLL PITSVHSSQV ESALGNVHKQ AIAKLANEGR
601: LELLIIILPD LKGSYGKIKR ICETELGIVS QCCLPRHVYQ MKPQYLENVA LKINVKVGGS NTVLNDAFTR RIPHVSDLPT IILGADVTHP QPGEDYSPSI
701: AAVVASMDWP YVTKYRGVVS AQTHREEIIQ DLYNTHEDPV RGKTHSGIIR ELLRAFRLST KTKPERIIFY RDGVSEGQFS QVLLYEMDAI RRACASLQED
801: YMPRVTFVVV QKRHHTRLFP AEHGSRDQTD KSGNILPGTV VDTQICHPRE FDFYLNSHAG IQGTSRPTHY HVLFDEITSL LTSCKCLQIT

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.