Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015926_P001 | Maize | nucleus | 21.41 | 98.22 |
| Zm00001d026146_P001 | Maize | nucleus | 13.28 | 93.84 |
| OQU88608 | Sorghum | plastid | 70.83 | 82.97 |
| Zm00001d018436_P001 | Maize | cytosol | 9.4 | 79.51 |
| Zm00001d005045_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 15.7 | 70.13 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 54.55 | 66.79 |
| Zm00001d025691_P001 | Maize | mitochondrion | 11.82 | 62.56 |
| Zm00001d032611_P002 | Maize | vacuole | 21.61 | 59.95 |
| TraesCS2B01G195200.2 | Wheat | nucleus | 58.24 | 59.62 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 59.79 | 59.5 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 59.5 | 59.21 |
| Zm00001d013063_P001 | Maize | nucleus | 54.26 | 55.45 |
| Os07t0188000-01 | Rice | nucleus | 56.1 | 55.04 |
| Zm00001d009158_P003 | Maize | golgi | 22.67 | 53.55 |
| CDX71410 | Canola | nucleus | 48.45 | 52.52 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 52.52 | 52.52 |
| CDY04517 | Canola | plastid | 48.26 | 52.04 |
| Bra011993.1-P | Field mustard | plastid | 48.35 | 51.66 |
| Zm00001d036886_P001 | Maize | plastid | 11.24 | 51.33 |
| KRH25139 | Soybean | plastid | 47.09 | 50.57 |
| Zm00001d025073_P001 | Maize | cytosol | 18.99 | 50.52 |
| AT2G27880.1 | Thale cress | cytosol, nucleus, plastid | 48.74 | 50.45 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 41.18 | 49.94 |
| KRH30536 | Soybean | plastid | 42.83 | 49.66 |
| Zm00001d013542_P003 | Maize | nucleus | 50.0 | 48.91 |
| Zm00001d025331_P002 | Maize | cytosol | 25.78 | 48.19 |
| Zm00001d044183_P001 | Maize | cytosol | 8.43 | 48.07 |
| Zm00001d036917_P009 | Maize | nucleus | 44.77 | 47.83 |
| Solyc06g074730.2.1 | Tomato | nucleus | 46.8 | 47.77 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 47.38 | 47.71 |
| Zm00001d046438_P003 | Maize | cytosol | 44.57 | 45.77 |
| Zm00001d011096_P059 | Maize | nucleus | 48.74 | 45.4 |
| Zm00001d002650_P003 | Maize | nucleus | 48.45 | 44.41 |
| Zm00001d033518_P001 | Maize | nucleus | 50.48 | 43.89 |
| Zm00001d026111_P014 | Maize | nucleus | 46.51 | 43.84 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 48.64 | 43.69 |
| Zm00001d037833_P001 | Maize | mitochondrion | 10.17 | 42.34 |
| Zm00001d014875_P001 | Maize | nucleus | 43.7 | 41.8 |
| Zm00001d021345_P001 | Maize | nucleus | 36.43 | 40.47 |
| Zm00001d006351_P001 | Maize | nucleus | 39.63 | 38.84 |
| Zm00001d039440_P001 | Maize | cytosol | 8.62 | 36.48 |
| Zm00001d033206_P001 | Maize | cytosol | 32.17 | 34.37 |
| Zm00001d002316_P003 | Maize | plastid | 27.52 | 33.18 |
| Zm00001d008249_P012 | Maize | nucleus | 28.59 | 32.78 |
| Zm00001d040429_P012 | Maize | nucleus | 28.29 | 32.41 |
| Zm00001d026300_P001 | Maize | nucleus | 27.42 | 32.12 |
| Zm00001d039214_P025 | Maize | nucleus | 28.49 | 31.82 |
| Zm00001d019905_P003 | Maize | nucleus | 27.91 | 31.27 |
| Zm00001d029573_P001 | Maize | cytosol | 31.01 | 31.01 |
| Zm00001d035554_P001 | Maize | plastid | 13.76 | 28.23 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | UniProt:A0A1D6F8V7 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | ProteinID:ONM27590.1 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF24 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI0008434AA9 |
| EnsemblPlantsGene:Zm00001d007786 | EnsemblPlants:Zm00001d007786_P001 | EnsemblPlants:Zm00001d007786_T001 | SEG:seg | : | : |
Description
argonaute5b argonaute5b
Coordinates
chr2:-:239622069..239628992
Molecular Weight (calculated)
112454.0 Da
IEP (calculated)
9.603
GRAVY (calculated)
-0.352
Length
1032 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASRGRGGGG GKGPSGGRGG EGRGRGIRGG GGYHHGDDGG GERGGRGDPG RGRGVGGRGR GPGGRGVDDH QQQPPPLGNT EGGGQGRGGM AVAVPPARPA
0101: APCPLAPDAA APAFPAAAAS SSAQAPRAPT EAAGAALADG MGKLAVADDR PAAPPVPAGK PVAQGPAHQP QEAPPLSRKR IVPPPRPGLG TSGRKLAVRA
0201: NHFFVEVSVN DIFHYDVLIN PEPKARKTNR MLLSELVKIH GATSLAHKTP AYDGSKSLYT AGELPFKSME FVVKLGKAGR EVDYKVTIRY AARPNVYQLK
0301: QLINSQLRNT PFDAIQALDV VLRESPSLNY VTLSRSFFSK KFGDDDIGGG LECWRGYYQS LRPTQMGLSL NIDTCSTSFY QPIDVVKFVA DCLQLTNPGQ
0401: PFLDRDRLKL KRALRGVLVE TEHQQGKRSI YRITGITSVP LAQLSFSCNE GPQLTVVEYF AQRYNVQLRY TAWPCLQSGN DSKPIYLPME VCKIIEGQKY
0501: PRKLSDTQVA NILKATCKRP QDREENIIKM VRHNNYSADK MAQVFGITVA NQMANVQARV LPPPMLKYHE SGKEKTVAPS LGQWNMINKK MVNGGTIHSW
0601: TCLSFSRIPL RLVDEICHEL VQKCNSIGMS FNPRPVTEVQ KDSHNNIEAA LRDVHRRAPN LQLLIVILPD VTGYYGEIKR MCETDLGIVS QCINPKKNRN
0701: KQYFENLALK INVKAGGRNT VLERASVPNG IPFVSDVPTI IFGADVTHPT AGEESSASVG AVSFLFSVTT VSFKCSGNLE VVASMDWPQV TTYKALVSAQ
0801: AHREEIIQNL GGMIRELLIS FYKRTGKKPK RIIFYRDGIS EGQFNHVLLL EMDAIRKACA SLEDGYLPPV TFVVIQKRHH TRLFPGVHGR RDVTDRSGNI
0901: LPGTVVDTEI CHPREFDFYL CSHAGIQGTS RPIHYHVLYD ENRFSADGLQ ILTNSLCYTY ARCTRAVSVV PPAYYAHLAA FRGRYYDEQG SSPAPDGTSV
1001: VGGDAAAAGD DPPACRRLPQ IKENVKEVMF FC
0101: APCPLAPDAA APAFPAAAAS SSAQAPRAPT EAAGAALADG MGKLAVADDR PAAPPVPAGK PVAQGPAHQP QEAPPLSRKR IVPPPRPGLG TSGRKLAVRA
0201: NHFFVEVSVN DIFHYDVLIN PEPKARKTNR MLLSELVKIH GATSLAHKTP AYDGSKSLYT AGELPFKSME FVVKLGKAGR EVDYKVTIRY AARPNVYQLK
0301: QLINSQLRNT PFDAIQALDV VLRESPSLNY VTLSRSFFSK KFGDDDIGGG LECWRGYYQS LRPTQMGLSL NIDTCSTSFY QPIDVVKFVA DCLQLTNPGQ
0401: PFLDRDRLKL KRALRGVLVE TEHQQGKRSI YRITGITSVP LAQLSFSCNE GPQLTVVEYF AQRYNVQLRY TAWPCLQSGN DSKPIYLPME VCKIIEGQKY
0501: PRKLSDTQVA NILKATCKRP QDREENIIKM VRHNNYSADK MAQVFGITVA NQMANVQARV LPPPMLKYHE SGKEKTVAPS LGQWNMINKK MVNGGTIHSW
0601: TCLSFSRIPL RLVDEICHEL VQKCNSIGMS FNPRPVTEVQ KDSHNNIEAA LRDVHRRAPN LQLLIVILPD VTGYYGEIKR MCETDLGIVS QCINPKKNRN
0701: KQYFENLALK INVKAGGRNT VLERASVPNG IPFVSDVPTI IFGADVTHPT AGEESSASVG AVSFLFSVTT VSFKCSGNLE VVASMDWPQV TTYKALVSAQ
0801: AHREEIIQNL GGMIRELLIS FYKRTGKKPK RIIFYRDGIS EGQFNHVLLL EMDAIRKACA SLEDGYLPPV TFVVIQKRHH TRLFPGVHGR RDVTDRSGNI
0901: LPGTVVDTEI CHPREFDFYL CSHAGIQGTS RPIHYHVLYD ENRFSADGLQ ILTNSLCYTY ARCTRAVSVV PPAYYAHLAA FRGRYYDEQG SSPAPDGTSV
1001: VGGDAAAAGD DPPACRRLPQ IKENVKEVMF FC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.