Factsheet for Zm00001d002650_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82149	Sorghum	nucleus	92.81	97.03
Zm00001d044183_P001	Maize	cytosol	15.28	95.03
Zm00001d037833_P001	Maize	mitochondrion	20.87	94.76
Zm00001d026111_P014	Maize	nucleus	89.7	92.24
Os04t0566500-04	Rice	nucleus	88.1	90.1
KRG99173	Soybean	cytosol	12.43	89.74
TraesCS2D01G400200.1	Wheat	nucleus	87.21	89.35
TraesCS2B01G421000.2	Wheat	nucleus	87.12	89.02
TraesCS2A01G403100.4	Wheat	nucleus	87.03	87.5
Zm00001d011096_P059	Maize	nucleus	81.44	82.76
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	56.13	81.34
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	82.86	81.2
TraesCSU01G065300.1	Wheat	nucleus	84.99	80.29
Solyc03g098280.2.1	Tomato	nucleus	68.92	79.18
TraesCS7D01G036100.3	Wheat	endoplasmic reticulum, golgi	85.08	79.17
Solyc06g072300.2.1	Tomato	nucleus	74.07	79.13
PGSC0003DMT400069313	Potato	cytosol	73.98	79.03
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	84.81	78.93
CDY04311	Canola	cytosol, nucleus, plastid	67.05	77.04
CDY41831	Canola	nucleus	70.96	76.53
AT1G48410.2	Thale cress	nucleus	71.31	76.48
VIT_17s0053g00680.t01	Wine grape	nucleus	73.62	76.41
CDY68174	Canola	nucleus	71.31	76.33
HORVU7Hr1G007000.14	Barley	nucleus	81.97	75.84
Bra014136.1-P	Field mustard	nucleus	71.67	74.79
Zm00001d025331_P002	Maize	cytosol	36.59	74.64
Zm00001d025073_P001	Maize	cytosol	25.49	73.97
PGSC0003DMT400079716	Potato	nucleus	73.09	73.03
GSMUA_Achr7P04100_001	Banana	extracellular	16.07	72.98
Bra032254.1-P	Field mustard	nucleus	70.96	71.92
CDY23683	Canola	cytosol, nucleus, plastid	69.27	71.82
Zm00001d036917_P009	Maize	nucleus	60.21	70.19
Zm00001d015926_P001	Maize	nucleus	13.68	68.44
Zm00001d046438_P003	Maize	cytosol	60.04	67.26
Zm00001d026146_P001	Maize	nucleus	8.61	66.44
Zm00001d014875_P001	Maize	nucleus	62.88	65.62
Zm00001d018436_P001	Maize	cytosol	6.66	61.48
Zm00001d005045_P001	Maize	cytosol, nucleus, peroxisome, plastid	12.34	60.17
Zm00001d032611_P002	Maize	vacuole	18.12	54.84
Zm00001d036886_P001	Maize	plastid	10.92	54.42
Zm00001d025691_P001	Maize	mitochondrion	9.24	53.33
Zm00001d021345_P001	Maize	nucleus	41.92	50.81
Zm00001d013542_P003	Maize	nucleus	47.42	50.62
Zm00001d013063_P001	Maize	nucleus	45.03	50.2
Zm00001d009158_P003	Maize	golgi	19.36	49.89
Zm00001d007786_P001	Maize	nucleus	44.41	48.45
Zm00001d006351_P001	Maize	nucleus	44.76	47.86
Zm00001d033518_P001	Maize	nucleus	47.42	44.99
Zm00001d033206_P001	Maize	cytosol	35.44	41.3
Zm00001d039440_P001	Maize	cytosol	8.08	37.3
Zm00001d040429_P012	Maize	nucleus	28.77	35.96
Zm00001d008249_P012	Maize	nucleus	28.42	35.56
Zm00001d039214_P025	Maize	nucleus	28.95	35.28
Zm00001d019905_P003	Maize	nucleus	28.51	34.85
Zm00001d029573_P001	Maize	cytosol	31.62	34.5
Zm00001d002316_P003	Maize	plastid	25.84	34.0
Zm00001d026300_P001	Maize	nucleus	25.75	32.92
Zm00001d035554_P001	Maize	plastid	12.97	29.03

Protein Annotations

EntrezGene:100304327	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	UniProt:A0A1D6E2V1
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaut_Gly-rich	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	ProteinID:ONM14934.1
InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF12764
PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF102	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000844D48C	EnsemblPlantsGene:Zm00001d002650	EnsemblPlants:Zm00001d002650_P003
EnsemblPlants:Zm00001d002650_T003	SEG:seg	:	:	:	:

Description

argonaute1c argonaute1c

Coordinates

chr2:+:18176301..18185185

Molecular Weight (calculated)

125499.0 Da

IEP (calculated)

9.595

GRAVY (calculated)

-0.463

Length

1126 amino acids

Sequence
(BLAST)

0001: MLVPIMVRKK RTGPGGSGET SGESSGASGQ GSSQRPERTQ QPGAGRGWVP QQGGRGGGQH QGRGGHYQGR GGPGPHHPGG LPEYHQREYQ GRGGEYQGQY
0101: QGRGGARSRG GISQPYYGGH RGGSVGRNVP PGPSRTVPEL HQAPYVQYQA PVISPSPSGP GSSSQPMAEV SSGQVQQQFE QLAIHGQSSM SQEVQVAPAS
0201: SKSVRFPLRP GKGTYGDRCI VKANHFFAEL PDKDLHQYDV TITPEVTSRG VNRAVMGELV TLYRQSHLGG RLPAYDGRKS LYTAGPLPFT SMTFEITLQD
0301: EEDSVGGGQG GQRRERVFRV VIKFAARADL HHLAMFLAGR QADAPQEALQ VLDIVLRELP TARYSPVGRS FYSPNLGRRQ QLGEGLESWR GFYQSIRPTQ
0401: MGLSLNIDMS STAFIEPLPV IDFVAQLLNR DISVRPLSDS DRVKIKKALR GVKVEVTHRG NMRRKYRISG LTSQATRELS FPVDDRGTVK TVVQYFMETY
0501: GFSIQHTTLP CLQVGNQQRP NYLPMEVCKI VEGQRYSKRL NEKQITALLK VTCQRPQERE LDILQVAVYH MFSYELFYQC IHLMYLNTVH HNAYYEDPYA
0601: QEFGIRIDER LAAVEARVLP PPRLKYHDSG REKDVLPRVG QWNMMNKKMV NGGRVSNWAC INFSRNVQDS AARGFCHELA IMCQISGMDF SLEPVLPPVT
0701: ARPEHVERAL KARYQDAMNI LRPQGRELDL LIVILPDING SLYGNDLFQK TLKHCPLDTF GHQHCFHFSG DLKRICETDL GLVSQCCLTK HVFKMSKQYL
0801: ANVALKINVK VGGRNTVLVD ALTRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEVTKYA GLVSAQAHRQ ELIQDLFKVW QDPQRRTVTG
0901: GMIKELLISF KRATGQKPQR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEPNYQPPVT FVVVQKRHHT RLFANNHNDQ RTVDRSGNIL PGTVVDSKIC
1001: HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NKFTADELQT LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPDT SDSGSMASGA RGPPPGAARS
1101: MRGAGSVAVR PLPALKENVK RVMFYC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.