Factsheet for TraesCS2B01G421000.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G400200.1	Wheat	nucleus	99.46	99.73
TraesCS2A01G403100.4	Wheat	nucleus	99.36	97.77
Zm00001d044183_P001	Maize	cytosol	15.15	92.27
OQU82149	Sorghum	nucleus	89.84	91.92
Zm00001d037833_P001	Maize	mitochondrion	20.6	91.53
KRG99173	Soybean	cytosol	12.79	90.38
Os04t0566500-04	Rice	nucleus	90.11	90.19
Zm00001d002650_P003	Maize	nucleus	89.02	87.12
Zm00001d026111_P014	Maize	nucleus	86.03	86.58
EES18841	Sorghum	nucleus	86.03	85.48
Zm00001d011096_P059	Maize	nucleus	84.75	84.3
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	85.84	82.33
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	57.35	81.34
TraesCS6B01G270900.1	Wheat	nucleus	78.49	79.72
Solyc06g072300.2.1	Tomato	nucleus	74.95	78.37
PGSC0003DMT400069313	Potato	cytosol	74.86	78.27
Solyc03g098280.2.1	Tomato	nucleus	69.42	78.06
CDY04311	Canola	cytosol, nucleus, plastid	68.24	76.73
CDY41831	Canola	nucleus	72.41	76.44
CDY68174	Canola	nucleus	72.96	76.43
VIT_17s0053g00680.t01	Wine grape	nucleus	75.23	76.41
AT1G48410.2	Thale cress	nucleus	72.41	76.0
Zm00001d025331_P002	Maize	cytosol	37.48	74.82
Bra014136.1-P	Field mustard	nucleus	73.14	74.7
Zm00001d025073_P001	Maize	cytosol	26.04	73.97
TraesCS6B01G466700.1	Wheat	nucleus	67.24	73.15
GSMUA_Achr7P04100_001	Banana	extracellular	16.33	72.58
CDY23683	Canola	cytosol, nucleus, plastid	71.14	72.19
Bra032254.1-P	Field mustard	nucleus	72.78	72.19
PGSC0003DMT400079716	Potato	nucleus	73.59	71.96
TraesCS7B01G256500.1	Wheat	cytosol	61.16	70.5
TraesCS7B01G482100.1	Wheat	nucleus	64.97	69.38
TraesCS6B01G206700.1	Wheat	plastid	56.9	66.14
TraesCS4B01G026600.1	Wheat	cytosol	28.49	64.74
TraesCS3B01G027100.1	Wheat	cytosol	8.62	62.09
TraesCS5B01G468000.1	Wheat	plastid	45.92	57.96
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	44.37	57.6
TraesCS3B01G287600.1	Wheat	nucleus	45.73	55.63
TraesCS5B01G454200.1	Wheat	cytosol	34.03	55.56
TraesCS3B01G135800.1	Wheat	cytosol	42.2	55.29
TraesCS5B01G451400.2	Wheat	plastid	51.09	53.11
TraesCS2B01G195200.2	Wheat	nucleus	48.09	52.58
TraesCS5B01G452500.1	Wheat	nucleus	43.47	52.52
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	46.73	52.28
TraesCS4B01G024000.1	Wheat	nucleus	47.82	51.46
TraesCS5B01G458100.1	Wheat	cytosol	35.57	41.26
TraesCS7B01G437900.1	Wheat	cytosol	27.04	36.93
TraesCS7B01G437700.1	Wheat	nucleus	28.77	36.06
TraesCS1B01G480100.1	Wheat	nucleus	30.22	35.92
TraesCS5B01G162300.1	Wheat	mitochondrion	29.13	35.75
TraesCS7B01G450300.1	Wheat	nucleus	29.13	34.93
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	29.85	34.85
TraesCS7B01G373400.1	Wheat	nucleus	23.77	33.33
TraesCS7B01G450200.2	Wheat	nucleus	27.95	33.26
TraesCS2B01G434000.1	Wheat	nucleus	31.67	33.24
TraesCS2B01G439000.2	Wheat	nucleus, unclear	29.76	31.36
TraesCS2B01G438600.1	Wheat	cytosol, nucleus, plastid	21.42	29.39
TraesCS2B01G438200.1	Wheat	nucleus	25.95	26.75

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaut_Gly-rich	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005515	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF12764	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS2B01G421000	EnsemblPlants:TraesCS2B01G421000.2	TIGR:cd02846	TIGR:cd04657	SEG:seg

Description

No Description!

Coordinates

chr2B:+:604993888..605001620

Molecular Weight (calculated)

122360.0 Da

IEP (calculated)

9.826

GRAVY (calculated)

-0.564

Length

1102 amino acids

Sequence
(BLAST)

0001: MVRKKRTGPG SPGESSGEAS GASGQGSSQR AERAPQQHGG GRGVAPQQHG RGGGQHQGRG GHYQGHGSAS HYPGGGPPEY QQRDYQGRGH PGGGPPEYQH
0101: RDYQGRGHPG GGPPEYQPRD YQGRGGPRPR GGGVPQPYYG GHRGGSAGRN VPPGPPRTVP ELHQAPYVQY QAPVVSPSAS GAGSSSQPVS EVSSGQVQQQ
0201: FQKLAIVDQS STSQSSQLAP ASSKSVRFPL RPGKGTHGDR CVVKANHFFA ELPDKDLHQY DVSITPEITS RGVNRAVMAE LVRLYRHSQL DGRLPAYDGR
0301: KSLYTAGPLP FPSKTFEITL HDEEESLVGG QVAPRRERQF RVVIKFAARA DLHHLAMFLA GRQPDAPQEA LQVLDIVLRE LPTARYSPVG RSFYSPNLGR
0401: RQKLGDGLES WRGFYQSIRP TQMGLSLNID MSSTAFIEPL PVIDFVAQLL SRDISVRPLS DSDRVKIKKA LRGVKVEVTH RGNMRRKYRI SGLTSQATRE
0501: LSFPVDDRGT VKTVVQYFLE TYGFNIQHTT LPCLQVGNQQ RPNYLPMEVC KIVEGQRYSK RLNEKQITAL LKVTCQRPQE REKDILQTVH HNAYYEDPYA
0601: QEFGIKIDER LASVEARVLP PPRLKYHDSG REKDVLPRIG QWNMMNKKMV NGGRVSHWAC INFSRNVQDS AARGFCHELA IMCQISGMDF APEPVLPPLT
0701: ARPEHVERAL KARYQDAMNI IRPQGRELDL LIVILPDNNG SLYGDLKRIC ETDLGLVSQC CLTKHVFKMS KQYLANVALK INVKVGGRNT VLVDALTRRI
0801: PLVSDRPTII FGADVTHPHP GEDSSPSIAA VVASQDWPEV TKYAGLVSAQ AHRQELIQDL FKVWQDPQRG TVTGGMIKEL LISFKRATGQ KPQRIIFYSI
0901: FRDGVSEGQF YQVLLYELDA IRKACASLEP NYQPPVTFVV VQKRHHTRLF ANNHNDQRTV DRSGNILPGT VVDSKICHPT EFDFYLCSHA GIQGTSRPAH
1001: YHVLWDENKF TADELQTLTN NLCYTYARCT RSVSIVPPAY YAHLAAFRAR FYMEPDTSDS GSMASGARGP PQGGRNTRPF GNVAVRPLPA LKENVKRVMF
1101: YC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.