Factsheet for TraesCS5B01G162300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G169500.1	Wheat	cytosol	97.1	98.87
TraesCS5A01G165900.1	Wheat	cytosol	96.55	98.19
HORVU0Hr1G012490.1	Barley	nucleus	96.55	98.19
Os07t0265600-01	Rice	cytosol, nucleus	29.96	87.06
KXG23356	Sorghum	nucleus	83.63	85.24
Zm00001d019905_P003	Maize	nucleus	83.07	81.0
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	17.48	66.53
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	15.92	66.2
GSMUA_Achr9P22630_001	Banana	nucleus	65.59	65.74
VIT_12s0059g01430.t01	Wine grape	nucleus	66.15	64.57
Solyc07g049500.2.1	Tomato	nucleus	62.03	61.68
CDX84712	Canola	nucleus	59.24	61.36
Bra022918.1-P	Field mustard	nucleus	59.24	61.36
CDX79495	Canola	nucleus	58.8	60.9
AT2G32940.1	Thale cress	nucleus	58.46	59.8
KRH20672	Soybean	nucleus	59.58	58.6
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	58.57	55.72
TraesCS1B01G480100.1	Wheat	nucleus	57.24	55.45
GSMUA_Achr9P27810_001	Banana	plastid	53.23	54.88
TraesCS7B01G437900.1	Wheat	cytosol	48.0	53.41
TraesCS7B01G450300.1	Wheat	nucleus	53.79	52.56
TraesCS7B01G437700.1	Wheat	nucleus	51.0	52.1
TraesCS7B01G450200.2	Wheat	nucleus	53.01	51.4
TraesCS7B01G373400.1	Wheat	nucleus	40.98	46.82
TraesCS4B01G026600.1	Wheat	cytosol	20.6	38.14
TraesCS3B01G027100.1	Wheat	cytosol	6.46	37.91
TraesCS3B01G135800.1	Wheat	cytosol	32.74	34.96
TraesCS5B01G468000.1	Wheat	plastid	33.3	34.25
TraesCS5B01G454200.1	Wheat	cytosol	25.06	33.33
TraesCS3B01G287600.1	Wheat	nucleus	32.85	32.56
TraesCS7B01G256500.1	Wheat	cytosol	34.19	32.11
TraesCS6B01G206700.1	Wheat	plastid	33.74	31.96
TraesCS6B01G466700.1	Wheat	nucleus	34.86	30.9
TraesCS7B01G482100.1	Wheat	nucleus	35.3	30.72
TraesCS5B01G452500.1	Wheat	nucleus	30.85	30.37
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	32.96	30.05
TraesCS4B01G024000.1	Wheat	nucleus	34.19	29.98
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	28.29	29.92
TraesCS5B01G451400.2	Wheat	plastid	34.74	29.43
TraesCS6B01G270900.1	Wheat	nucleus	35.52	29.4
TraesCS2B01G421000.2	Wheat	nucleus	35.75	29.13
TraesCS2B01G195200.2	Wheat	nucleus	32.07	28.57
TraesCS2B01G438600.1	Wheat	cytosol, nucleus, plastid	23.39	26.15
TraesCS2B01G439000.2	Wheat	nucleus, unclear	29.51	25.33
TraesCS5B01G458100.1	Wheat	cytosol	25.95	24.53
TraesCS2B01G434000.1	Wheat	nucleus	27.17	23.24
TraesCS2B01G438200.1	Wheat	nucleus	23.94	20.11

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259
GO:GO:0006306	GO:GO:0006342	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016043	GO:GO:0030422	GO:GO:0035197
GO:GO:0040029	GO:GO:0051607	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488
PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF35	InterPro:Piwi	InterPro:RNaseH-like_sf
InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS5B01G162300
EnsemblPlants:TraesCS5B01G162300.1	TIGR:cd02846	TIGR:cd04657	SEG:seg	:	:

Description

No Description!

Coordinates

chr5B:+:299602511..299610278

Molecular Weight (calculated)

100131.0 Da

IEP (calculated)

9.636

GRAVY (calculated)

-0.282

Length

898 amino acids

Sequence
(BLAST)

001: MLRANAWWSS YQYLIMAAKT GGAVQVHKND TVKRTAMART GLGREGKPIR LLSNHFAVKL SGIDSVFYQY SVSIKSDDDQ VVEGKGIGRK VIDKMLQTYS
101: SELAGKDFAY DGEKCLFTVG PLPQNNFEFT VIMEETSARA VGGSPGHESP GPGDKKRVKR SHLPKQFVVG ISYAARIPLK SVALVLQGSD SDHAQDALRV
201: LDIVLRQQQA KRGCLLVRQS FFSDDSRNLV DLTGGVSGCR GLHSSFRTTM NGLSLNMDVS TTMIVTPGPV VNFLLTNQNV RDVRDIDWPK AKRMLKNLRV
301: KATHNNMEFK IIGLSDQPCS RQTFPMKVRS GSSEGQTVDI TVEEYFKSKQ VFLEKPYLPC LDVGKSKRPN YLPIELANMI SLQRYTKALS SQQRTTLVEK
401: SRQKPQDRMR VVTDAVKSNR YDDDPIFSSC GIKIDNQLTR VEGRVLSAPM LVVGNSQDCV PFKGRWNYNN KKLFEPVRIE RWAIVNFSAR CDMSRISRDL
501: INCGRTKGII IEGPYSLVDE DNQARRCAPI VRVERMFEKV KANLPGPPEF LLCVLPERKN CDIYGPWKKK NLHEMGIVTQ CIVPSTKMND QYFTNVLLKI
601: NAKLGGMNSK LALEHSRKIP VINKIPTIIL GMDVSHGSPG RSDIPSIAAV VGSRCWPLIS RYRASVRTQS PKVEMIDSLF KPLDNGKDDG IIRELLLDFY
701: TTSQQRKPEQ IIIFRDGVSE SQFSQVLNLE VDQIIKAYQN MGQGPPPKIT VIIAQKNHHT KLFQADAPDN VPAGTVVDKG IVHPKQYDFY MCAHAGPIGT
801: SRPTHYHVLL DQIGFSPDEL QSLVLSLSYV YQRSTTAISV VAPICYAHLA AAQMSQFIKF EEFADTSSGS GVPSSSTAAT VPELPRLHAD VCSSMFFC

Best Arabidopsis Sequence Match ( AT2G32940.1 )
(BLAST)

001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC

Arabidopsis Description

AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.