Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 43.31 | 98.24 |
| TraesCS7A01G557400.1 | Wheat | plastid | 97.97 | 97.97 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 96.9 | 96.99 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 44.48 | 95.82 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 94.57 | 91.73 |
| Os06t0729300-01 | Rice | nucleus | 81.1 | 80.64 |
| TraesCS6B01G466700.1 | Wheat | nucleus | 73.06 | 74.43 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 55.72 | 74.0 |
| Solyc03g098280.2.1 | Tomato | nucleus | 65.02 | 68.47 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 64.53 | 67.96 |
| Solyc06g072300.2.1 | Tomato | nucleus | 69.19 | 67.74 |
| PGSC0003DMT400069313 | Potato | cytosol | 69.09 | 67.65 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 69.57 | 66.18 |
| CDY41831 | Canola | nucleus | 66.67 | 65.9 |
| AT1G48410.2 | Thale cress | nucleus | 66.96 | 65.81 |
| CDY68174 | Canola | nucleus | 66.57 | 65.3 |
| TraesCS7B01G256500.1 | Wheat | cytosol | 60.37 | 65.17 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 69.38 | 64.97 |
| TraesCS4B01G026600.1 | Wheat | cytosol | 30.52 | 64.95 |
| Bra014136.1-P | Field mustard | nucleus | 66.86 | 63.95 |
| TraesCS6B01G270900.1 | Wheat | nucleus | 66.96 | 63.69 |
| PGSC0003DMT400079716 | Potato | nucleus | 68.22 | 62.47 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 65.7 | 62.43 |
| Bra032254.1-P | Field mustard | nucleus | 67.05 | 62.29 |
| TraesCS6B01G206700.1 | Wheat | plastid | 56.69 | 61.71 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 9.11 | 61.44 |
| TraesCS5B01G468000.1 | Wheat | plastid | 48.26 | 57.04 |
| TraesCS3B01G135800.1 | Wheat | cytosol | 44.09 | 54.1 |
| TraesCS3B01G287600.1 | Wheat | nucleus | 46.32 | 52.76 |
| TraesCS5B01G454200.1 | Wheat | cytosol | 34.3 | 52.44 |
| TraesCS5B01G116900.5 | Wheat | cytosol, mitochondrion, nucleus, plastid | 42.73 | 51.94 |
| TraesCS5B01G452500.1 | Wheat | nucleus | 44.38 | 50.22 |
| TraesCS4B01G024000.1 | Wheat | nucleus | 49.13 | 49.51 |
| TraesCS5B01G451400.2 | Wheat | plastid | 50.39 | 49.06 |
| TraesCS2B01G195200.2 | Wheat | nucleus | 47.87 | 49.01 |
| TraesCS5B01G455700.1 | Wheat | cytosol, mitochondrion, plastid | 46.12 | 48.32 |
| TraesCS5B01G458100.1 | Wheat | cytosol | 35.95 | 39.05 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 27.81 | 35.56 |
| TraesCS5B01G162300.1 | Wheat | mitochondrion | 30.72 | 35.3 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 29.46 | 34.58 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 30.91 | 34.41 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 30.33 | 34.06 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 30.43 | 33.26 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 29.55 | 32.94 |
| TraesCS2B01G434000.1 | Wheat | nucleus | 33.24 | 32.67 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 24.81 | 32.57 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 23.84 | 30.64 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 30.81 | 30.4 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 27.52 | 26.57 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF57 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| EnsemblPlantsGene:TraesCS7B01G482100 | EnsemblPlants:TraesCS7B01G482100.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : |
Description
No Description!
Coordinates
chr7B:+:739927658..739933838
Molecular Weight (calculated)
113656.0 Da
IEP (calculated)
9.170
GRAVY (calculated)
-0.424
Length
1032 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSWRPRMPG FGDEGGGGGG RGGGQGRGMG GRGRGGFGFY PQQGGRGGGG GGGGSYQPRG AAQQWRPAAP APAQPHANGN GGPAATIAPE LRQANTDDAA
0101: PAPPAPAPEA LEAVAEHLEL DDVTDQFDAL SMSMGGDDSG SVTTGTGREL AVARAPIPRA DSSCKFPHRP GSGRAGTRCL VKANHFLAEL PDKDLHQYDV
0201: AITPETSRVS GRAVMGELVR LHRASYLGGR LPAYDGSKSM YTAGPLPFTS KEFHITVLEE DDGSGQERRE RTFKVVIRYA ARADLRRLEQ YIAGRQAEAP
0301: QEALQVLDIV LRELPTARYA PYGRSFFSPD FGRRRSLGDG VESWRGFYQT IRPTQMGLSL NIDMSATSFF EPLPVLDFVG QLLNADIHSR ALSDAERVKI
0401: KKALRGVKVE VTHRGNIRRK YRISGLTAQT TRELTFPVDQ GGTVKSVVQY FQETYGFAIQ HINLPCLTVG NQQRPNYLPM EVCKIVEGQR YSKRLNQGQI
0501: RALLEETCQR PHDRERDIVQ MVNHNSYHDD PYAKEFGIKI SERLASVEAR ILPAPRLKYS ETGREKDCLP RVGQWNMMNK KMVNGARVRS WLCVNFARNV
0601: QESMATGFCR ELARMCQASG MDFALEPVLP VIYVRPDQVE RGLKARFHDA MTALGPQRKE IELLIGILPD NNGSLYGDLK RVCEIDLGLI SQCCLTKQVF
0701: KMNKQILANL SLKINVKVGG RNTVLADALT RRIPLVTDKP TIIFGADVTH PHPGEDSSPS IAAVVASQDW PEVTKYAGLV SAQTHRQELI EDLYNVTHDP
0801: QRGTIHGGMV RELLTSFKRT TGEKPERIIF YRDGVSEGQF YQVLLHELDA IRKACASLEA NYQPLVTFVV VQKRHHTRLF AHNHNDQSTV DKSGNILPGT
0901: VIDSKICHPT EFDFFLCSHA GIKGTSRPAH YHVLWDENNF TADGLQTLTN NLCYTYARCT RSVSIVPPAY YAHLAAFRAR FYMEPDSSDS GSISSARKSG
1001: SSTSRSTRAA GAGVVRPLPA LKDSVKKVMF YC
0101: PAPPAPAPEA LEAVAEHLEL DDVTDQFDAL SMSMGGDDSG SVTTGTGREL AVARAPIPRA DSSCKFPHRP GSGRAGTRCL VKANHFLAEL PDKDLHQYDV
0201: AITPETSRVS GRAVMGELVR LHRASYLGGR LPAYDGSKSM YTAGPLPFTS KEFHITVLEE DDGSGQERRE RTFKVVIRYA ARADLRRLEQ YIAGRQAEAP
0301: QEALQVLDIV LRELPTARYA PYGRSFFSPD FGRRRSLGDG VESWRGFYQT IRPTQMGLSL NIDMSATSFF EPLPVLDFVG QLLNADIHSR ALSDAERVKI
0401: KKALRGVKVE VTHRGNIRRK YRISGLTAQT TRELTFPVDQ GGTVKSVVQY FQETYGFAIQ HINLPCLTVG NQQRPNYLPM EVCKIVEGQR YSKRLNQGQI
0501: RALLEETCQR PHDRERDIVQ MVNHNSYHDD PYAKEFGIKI SERLASVEAR ILPAPRLKYS ETGREKDCLP RVGQWNMMNK KMVNGARVRS WLCVNFARNV
0601: QESMATGFCR ELARMCQASG MDFALEPVLP VIYVRPDQVE RGLKARFHDA MTALGPQRKE IELLIGILPD NNGSLYGDLK RVCEIDLGLI SQCCLTKQVF
0701: KMNKQILANL SLKINVKVGG RNTVLADALT RRIPLVTDKP TIIFGADVTH PHPGEDSSPS IAAVVASQDW PEVTKYAGLV SAQTHRQELI EDLYNVTHDP
0801: QRGTIHGGMV RELLTSFKRT TGEKPERIIF YRDGVSEGQF YQVLLHELDA IRKACASLEA NYQPLVTFVV VQKRHHTRLF AHNHNDQSTV DKSGNILPGT
0901: VIDSKICHPT EFDFFLCSHA GIKGTSRPAH YHVLWDENNF TADGLQTLTN NLCYTYARCT RSVSIVPPAY YAHLAAFRAR FYMEPDSSDS GSISSARKSG
1001: SSTSRSTRAA GAGVVRPLPA LKDSVKKVMF YC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.