Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 41.45 | 96.92 |
| TraesCS7A01G557400.1 | Wheat | plastid | 92.58 | 95.45 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 92.29 | 95.25 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 91.73 | 94.57 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 42.58 | 94.57 |
| Os06t0729300-01 | Rice | nucleus | 78.85 | 80.83 |
| KXG20965 | Sorghum | nucleus | 78.01 | 79.2 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 53.95 | 73.87 |
| Zm00001d014875_P001 | Maize | nucleus | 73.03 | 72.01 |
| Solyc03g098280.2.1 | Tomato | nucleus | 63.06 | 68.47 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 62.41 | 67.76 |
| Solyc06g072300.2.1 | Tomato | nucleus | 66.82 | 67.46 |
| PGSC0003DMT400069313 | Potato | cytosol | 66.73 | 67.36 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 67.67 | 66.36 |
| CDY41831 | Canola | nucleus | 64.19 | 65.42 |
| AT1G48410.2 | Thale cress | nucleus | 64.38 | 65.24 |
| CDY68174 | Canola | nucleus | 64.19 | 64.92 |
| Bra014136.1-P | Field mustard | nucleus | 64.38 | 63.48 |
| PGSC0003DMT400079716 | Potato | nucleus | 66.07 | 62.38 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 63.25 | 61.97 |
| HORVU6Hr1G036840.2 | Barley | plastid | 55.17 | 61.85 |
| Bra032254.1-P | Field mustard | nucleus | 64.57 | 61.84 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 64.38 | 56.29 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 44.36 | 55.99 |
| HORVU4Hr1G004030.1 | Barley | mitochondrion | 46.9 | 48.31 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 8.93 | 46.57 |
| HORVU3Hr1G021290.1 | Barley | cytosol, nucleus | 44.92 | 45.48 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 9.59 | 40.8 |
| HORVU0Hr1G012490.1 | Barley | nucleus | 29.7 | 35.79 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 29.32 | 33.84 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 30.83 | 32.41 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 29.14 | 29.61 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 15.13 | 26.92 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 24.44 | 25.52 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | UniProt:A0A287Y0T8 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 |
| EnsemblPlantsGene:HORVU7Hr1G120600 | EnsemblPlants:HORVU7Hr1G120600.3 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom |
| InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF57 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | UniParc:UPI000B47190E | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:651899946..651906855
Molecular Weight (calculated)
117531.0 Da
IEP (calculated)
9.006
GRAVY (calculated)
-0.391
Length
1064 amino acids
Sequence
(BLAST)
(BLAST)
0001: AFSPPIALHS TLTGLLLADS ERTEQQAVCG SIPANEAADR ASMGSRRPRL PVFGDEGGGG GQGRGAGGRG RGGFGFYPQQ GGRGGVGPYQ PRAAAQQWRP
0101: AAPAPAQTHA NGGGPAATIA PELRQAKTED AVPAPPVPAS PPSDALEAVA DHLQDVTDQF DALSMDGDVS DSASVTAAGR ELVVARAPIP RPDSSCKFPH
0201: RPGSGRAGTR CLVKANHFLA ELPDKDLHQY DVAITPETSR VSGRAVMGEL VRLHRASYLG GRLPAYDGRK SMYTAGPLPF TSKEFHITVL EEDDGSGQER
0301: RERTFKVVIR YAARADLRRL EQYIAGRQAE APQEALQVLD IVLRELPTAR YAPYGRSFFS PDFGRRRSLG DGVESWRGFY QTIRPTQMGL SLNIDMSATS
0401: FFEPLPVIDF VGQLLNSDIH SRCLSDAERV KIKKALRGVK VEVTHRGNIR RKYRISGLTP QATRELSFPV DQGGTVKSVV QYFQETYGFA IQHINLPCLT
0501: VGNQQRPNYL PMEVCKIVEG QRYSKRLNQS QIRALLEETC QRPHDRERDI VQMVNHNSYH DDPYAKEFGI KISERLASIE ARILPAPRLK YSETGREKDC
0601: LPRVGQWNMM NKKMVNGARV RSWLCVNFAR NVQESMATGF CRELARMCQA SGMDFALEPV LPVIYVRPDQ VERGLKARFH DAMTALGPQR KEIELLIGIL
0701: PDNNGSLYGD LKRVCEIDLG LISQCCLTKQ VFKMNKQILA NLSLKINVKV GGRNTVLADA LTRRIPLVTD KPTIIFGADV THPHPGEDSS PSIAAVVASQ
0801: DWPEVTKYAG LVSAQSHRQE LIEDLYNVTH DPQRGTVHGG MVRELLISFK RTTGEKPERI IFYRDGVSEG QFYQVLLHEL DAIRKACASL EANYQPQVTF
0901: VVVQKRHHTR LFAHNHNDQS TVDKSGNILP GTVIDSKICH PTEFDFFLCS HAGIKGTSRP AHYHVLWDEN NFTADGLQTL TNNLCYTYAR CTRSVSIVPP
1001: AYYAHLAAFR ARFYMEPDSS DSGSIMSARQ SSSSTSRSTR AAGAGIVRPL PALKDSVKKV MFYC
0101: AAPAPAQTHA NGGGPAATIA PELRQAKTED AVPAPPVPAS PPSDALEAVA DHLQDVTDQF DALSMDGDVS DSASVTAAGR ELVVARAPIP RPDSSCKFPH
0201: RPGSGRAGTR CLVKANHFLA ELPDKDLHQY DVAITPETSR VSGRAVMGEL VRLHRASYLG GRLPAYDGRK SMYTAGPLPF TSKEFHITVL EEDDGSGQER
0301: RERTFKVVIR YAARADLRRL EQYIAGRQAE APQEALQVLD IVLRELPTAR YAPYGRSFFS PDFGRRRSLG DGVESWRGFY QTIRPTQMGL SLNIDMSATS
0401: FFEPLPVIDF VGQLLNSDIH SRCLSDAERV KIKKALRGVK VEVTHRGNIR RKYRISGLTP QATRELSFPV DQGGTVKSVV QYFQETYGFA IQHINLPCLT
0501: VGNQQRPNYL PMEVCKIVEG QRYSKRLNQS QIRALLEETC QRPHDRERDI VQMVNHNSYH DDPYAKEFGI KISERLASIE ARILPAPRLK YSETGREKDC
0601: LPRVGQWNMM NKKMVNGARV RSWLCVNFAR NVQESMATGF CRELARMCQA SGMDFALEPV LPVIYVRPDQ VERGLKARFH DAMTALGPQR KEIELLIGIL
0701: PDNNGSLYGD LKRVCEIDLG LISQCCLTKQ VFKMNKQILA NLSLKINVKV GGRNTVLADA LTRRIPLVTD KPTIIFGADV THPHPGEDSS PSIAAVVASQ
0801: DWPEVTKYAG LVSAQSHRQE LIEDLYNVTH DPQRGTVHGG MVRELLISFK RTTGEKPERI IFYRDGVSEG QFYQVLLHEL DAIRKACASL EANYQPQVTF
0901: VVVQKRHHTR LFAHNHNDQS TVDKSGNILP GTVIDSKICH PTEFDFFLCS HAGIKGTSRP AHYHVLWDEN NFTADGLQTL TNNLCYTYAR CTRSVSIVPP
1001: AYYAHLAAFR ARFYMEPDSS DSGSIMSARQ SSSSTSRSTR AAGAGIVRPL PALKDSVKKV MFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.