Factsheet for Bra032254.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23683	Canola	cytosol, nucleus, plastid	97.66	99.91
CDY04311	Canola	cytosol, nucleus, plastid	87.76	99.49
Bra014136.1-P	Field mustard	nucleus	91.9	94.62
AT1G48410.2	Thale cress	nucleus	86.14	91.14
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	56.8	81.21
Zm00001d044183_P001	Maize	cytosol	13.14	80.66
Zm00001d037833_P001	Maize	mitochondrion	17.73	79.44
Solyc03g098280.2.1	Tomato	nucleus	69.58	78.88
Solyc06g072300.2.1	Tomato	nucleus	74.35	78.37
KRH38925	Soybean	endoplasmic reticulum	74.53	78.26
PGSC0003DMT400069313	Potato	cytosol	74.17	78.18
KRH09472	Soybean	nucleus	73.72	77.78
VIT_17s0053g00680.t01	Wine grape	nucleus	74.98	76.77
GSMUA_Achr3P13970_001	Banana	nucleus	72.19	75.66
TraesCS7D01G552900.1	Wheat	mitochondrion	30.87	75.38
GSMUA_AchrUn_...	Banana	cytosol	13.14	74.49
OQU82149	Sorghum	nucleus	71.92	74.19
TraesCSU01G081900.1	Wheat	plastid	64.54	73.31
Os04t0566500-04	Rice	nucleus	72.46	73.12
TraesCS7D01G553200.1	Wheat	nucleus, plastid	31.5	73.07
GSMUA_Achr1P17950_001	Banana	nucleus	69.31	72.99
TraesCS2D01G400200.1	Wheat	nucleus	72.1	72.88
TraesCS2B01G421000.2	Wheat	nucleus	72.19	72.78
Os02t0672200-01	Rice	cytosol	70.84	72.74
PGSC0003DMT400079716	Potato	nucleus	73.54	72.49
TraesCS2A01G403100.4	Wheat	nucleus	72.19	71.61
GSMUA_AchrUn_...	Banana	mitochondrion	68.41	71.43
GSMUA_Achr3P27070_001	Banana	nucleus	69.13	71.38
EES18841	Sorghum	nucleus	70.93	71.06
TraesCS6B01G466700.1	Wheat	nucleus	64.72	70.98
Zm00001d002650_P003	Maize	nucleus	71.92	70.96
Os02t0831600-01	Rice	extracellular	64.45	70.82
GSMUA_Achr1P07120_001	Banana	cytosol	67.15	70.58
Zm00001d026111_P014	Maize	nucleus	69.49	70.5
Zm00001d011096_P059	Maize	nucleus	70.3	70.49
GSMUA_Achr7P04100_001	Banana	extracellular	15.39	68.95
Bra033698.1-P	Field mustard	plastid	60.4	68.89
Os06t0729300-01	Rice	nucleus	64.27	68.79
TraesCS6A01G254600.2	Wheat	plastid	67.06	68.66
TraesCS6D01G403900.1	Wheat	plastid	65.17	68.63
Zm00001d025073_P001	Maize	cytosol	23.94	68.56
KXG20965	Sorghum	nucleus	64.63	68.51
TraesCS6B01G270900.1	Wheat	nucleus	66.88	68.48
Zm00001d025331_P002	Maize	cytosol	34.02	68.48
TraesCSU01G065300.1	Wheat	nucleus	73.27	68.29
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	69.67	67.36
TraesCS6D01G235900.1	Wheat	endoplasmic reticulum	67.33	67.21
TraesCS7B01G482100.1	Wheat	nucleus	62.29	67.05
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	73.0	67.02
TraesCS7A01G557400.1	Wheat	plastid	62.2	66.96
TraesCS7D01G553000.1	Wheat	cytosol	62.11	66.93
TraesCS7D01G036100.3	Wheat	endoplasmic reticulum, golgi	72.55	66.61
HORVU7Hr1G007000.14	Barley	nucleus	70.75	64.58
HORVU7Hr1G120600.3	Barley	cytosol, nucleus	61.84	64.57
OQU86027	Sorghum	plastid	62.65	63.04
Zm00001d014875_P001	Maize	nucleus	60.58	62.37
TraesCS3B01G027100.1	Wheat	cytosol	8.55	62.09
TraesCS2A01G258200.1	Wheat	cytosol	36.63	61.11
Bra011993.1-P	Field mustard	plastid	49.51	56.94
GSMUA_AchrUn_...	Banana	cytosol	15.57	56.91
TraesCS1D01G151300.3	Wheat	plastid	42.03	55.01
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	41.94	54.89
TraesCS2A01G258100.1	Wheat	mitochondrion	42.66	54.11
Os02t0169400-01	Rice	nucleus	41.67	52.85
HORVU2Hr1G103840.1	Barley	cytosol	10.53	46.8
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	9.09	46.76
Bra022918.1-P	Field mustard	nucleus	29.07	37.25
Bra020152.1-P	Field mustard	nucleus	29.25	35.87
Bra002361.1-P	Field mustard	nucleus	28.89	35.24
Bra034318.1-P	Field mustard	nucleus	28.89	34.82
Bra003999.1-P	Field mustard	nucleus	30.69	34.76
Bra002360.1-P	Field mustard	nucleus	28.53	34.09
Bra040815.1-P	Field mustard	cytosol	27.9	30.72
Bra023172.1-P	Field mustard	nucleus	28.53	30.57
Bra002349.1-P	Field mustard	nucleus	27.99	18.28

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaut_Gly-rich	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	EnsemblPlantsGene:Bra032254	EnsemblPlants:Bra032254.1	EnsemblPlants:Bra032254.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M4ETX2
InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF12764
PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF102	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0002547CAD	SEG:seg	:

Description

AT1G48410 (E=0.0) AGO1 | AGO1 (ARGONAUTE 1); endoribonuclease/ miRNA binding / protein binding / siRNA binding

Coordinates

chrA05:+:12298308..12303962

Molecular Weight (calculated)

122893.0 Da

IEP (calculated)

9.740

GRAVY (calculated)

-0.614

Length

1111 amino acids

Sequence
(BLAST)

0001: MVRKKRTDGP SEGGEGSGSR AAPASGGGRG GYQQGRGGGG GGQQQGGRGY SPQSQQGGRG GGRGYGQPQQ QQYGGPREGH PPQQQQQQQY GGPRGGQPPQ
0101: QQQYGGPRGG QPPQQQQYSG PRGGQPPSQQ QYGGSREGQP PQQQHQQYGG PRGGPPRGGG RGGASSAGLP QRQSVPELHQ ATLPTYQAVS SQPTPAEVSP
0201: TQMPDPPAPV QEFEQLSIEQ GAPSQAIQPI PSSSKACKFP LRPGKGQFGK RCIVKANHFF AELPDKDLHQ YDVTITPEVT SRGVNRAVMK QLVDLYRETH
0301: LGRRLPAYDG RKSLYTAGPL PFVSKEFRIL LQDEEEGAGG QRREREFKVV IKLAARADLH HLGLFLQGKQ ADAPQEALQV LDIVLRELPT SKERYTPVGR
0401: SFYSPDIGRK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEALP VTEFVCELLN RDIRSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS
0501: GLTAVATREL TFPVDERNTQ KSVVEYFYET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK IVEGQRYSKR LNERQITALL KVTCQRPQER EKDILRTVGL
0601: NDYDHDPYAK EFGIKISASL ASVEARILPP PWLKYHDSGR EGTCLPQVGQ WNMMNKKMIN GGTVSNWICV NFSRQVPDNL ARTFCQELAQ MCHTSGMAFN
0701: PEPVLPPVSA RPEQVEKVLK TRYHDAMAKL SKGKEIDLLI VILPDNNGSL YGDLKRICET ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL
0801: VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP
0901: LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAHNHN DRNSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT
1001: SRPAHYHVLW DENNFSADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP ETSDSGSMAS GSMARGGGMG GRNTRGGPHV NAAVRPLPPL
1101: KDNVKRVMFY C

Best Arabidopsis Sequence Match ( AT1G48410.3 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.