Factsheet for TraesCS2A01G258200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G258100.1	Wheat	mitochondrion	99.55	75.68
KRG99173	Soybean	cytosol	15.47	66.03
TraesCS1D01G151300.3	Wheat	plastid	64.26	50.41
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	58.41	50.06
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	63.66	49.94
Solyc03g098280.2.1	Tomato	nucleus	62.01	42.14
TraesCS7A01G371200.2	Wheat	cytosol	59.31	41.06
TraesCS5A01G446000.1	Wheat	cytosol	51.5	40.4
CDY04311	Canola	cytosol, nucleus, plastid	58.86	40.0
Solyc06g072300.2.1	Tomato	nucleus	62.76	39.66
TraesCS6A01G178100.2	Wheat	plastid	56.31	39.56
Os02t0169400-01	Rice	nucleus	51.95	39.5
PGSC0003DMT400069313	Potato	cytosol	62.46	39.47
AT1G48410.2	Thale cress	nucleus	61.56	39.05
TraesCS4A01G288300.1	Wheat	plastid	50.0	38.86
CDY41831	Canola	nucleus	60.66	38.7
TraesCS7A01G557400.1	Wheat	plastid	59.91	38.66
TraesCS2A01G403100.4	Wheat	nucleus	65.02	38.66
VIT_17s0053g00680.t01	Wine grape	nucleus	62.91	38.62
CDY68174	Canola	nucleus	60.81	38.5
TraesCS6A01G254600.2	Wheat	plastid	62.16	38.16
TraesCS4A01G288000.1	Wheat	cytosol	40.99	38.08
Bra014136.1-P	Field mustard	nucleus	60.81	37.53
Bra032254.1-P	Field mustard	nucleus	61.11	36.63
PGSC0003DMT400079716	Potato	nucleus	61.71	36.47
CDY23683	Canola	cytosol, nucleus, plastid	59.01	36.19
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	64.86	35.7
TraesCS7A01G067500.2	Wheat	cytosol	44.29	34.54
TraesCS2A01G168900.1	Wheat	cytosol	50.6	32.5
TraesCS3A01G116800.1	Wheat	nucleus	46.1	29.04
TraesCS2A01G419800.2	Wheat	nucleus	29.58	27.94
TraesCS7A01G521000.1	Wheat	nucleus	33.93	27.87
TraesCS2A01G414800.1	Wheat	nucleus	38.44	27.41
TraesCS7A01G533100.1	Wheat	cytosol	36.64	27.08
TraesCS5A01G165900.1	Wheat	cytosol	34.23	25.82
TraesCS1A01G445500.1	Wheat	golgi, unclear	35.74	25.73
TraesCS3A01G188400.1	Wheat	nucleus	34.83	25.33
TraesCS2A01G419900.1	Wheat	nucleus	33.63	21.35
TraesCS2A01G419500.1	Wheat	nucleus	30.78	19.25

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171
PFAM:PF08699	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF102	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS2A01G258200	EnsemblPlants:TraesCS2A01G258200.1	TIGR:cd02846
TIGR:cd04657	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:403165680..403183742

Molecular Weight (calculated)

74875.0 Da

IEP (calculated)

9.105

GRAVY (calculated)

-0.156

Length

666 amino acids

Sequence
(BLAST)

001: MFHELGGGLK GCCGFYRSIQ RSQMGLSLNI DTSYKAFIKP QLVIDFVAEL LCRRISDGPI NYIERLKIAK ALHGIKVYVT HRGDVRKKYR ISGLSSEGAS
101: KLSFPVGDHG TQKTVMQYFQ EKHGYDIQHF VLPCLQVGNQ QRPNYLPMEV CKIAEGQHYR EQLNEEQLSA LREVTCQRPI EKELAILQTS KLYNADPYTK
201: EFGITFYNKL TTVEGRVLPP PYLKFLDRTG KNDVLVLPKV GKWDMWCKKM VNGGVVNTWA CINFAWEVTD AHALNFCDEL VLMCNVSGMD FRPEPVLPVA
301: AYDPKSVARS LKKHHKRVMN ILGPRRQKLD LLILILPDNN GTLYGDIKRI LETDIGVVSQ CCLAKHVFMP KKQYFANVAL KINVKAGGRN TVLVSALERK
401: LPRIGKIPTI IFGADVSHPH PGEGCSSPSI AAVVASQDWP EITKYAGLVS PQTHREEVIN NLFNEETGGM IKEHLISFRR ATGCIPGRII FYRDGVSNGQ
501: LNQVLDVELP AIKKACASLD PCYSPRVTFV VVQKRHHTRL FSDNYDVVST IYGSGNVLPG TVIDKEVCHP TDFDFYLCSH AVTKGVSRPV RYHVLWDENK
601: FTANALQTLT NHLCYAYARC TSSVSVVPPV YYAHLLASRG RLYIKRGHEG SFPVLSENVK GVMFFC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.