Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G400200.1 | Wheat | nucleus | 97.59 | 99.45 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 97.77 | 99.36 |
| Zm00001d044183_P001 | Maize | cytosol | 14.91 | 92.27 |
| OQU82149 | Sorghum | nucleus | 88.3 | 91.83 |
| Zm00001d037833_P001 | Maize | mitochondrion | 20.18 | 91.13 |
| Os04t0566500-04 | Rice | nucleus | 89.55 | 91.1 |
| KRG99173 | Soybean | cytosol | 12.59 | 90.38 |
| Zm00001d002650_P003 | Maize | nucleus | 87.5 | 87.03 |
| Zm00001d026111_P014 | Maize | nucleus | 84.55 | 86.48 |
| EES18841 | Sorghum | nucleus | 85.0 | 85.84 |
| Zm00001d011096_P059 | Maize | nucleus | 83.75 | 84.66 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 90.98 | 84.21 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 84.82 | 82.68 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 56.34 | 81.21 |
| TraesCS6A01G254600.2 | Wheat | plastid | 77.68 | 80.18 |
| Solyc06g072300.2.1 | Tomato | nucleus | 73.75 | 78.37 |
| PGSC0003DMT400069313 | Potato | cytosol | 73.66 | 78.27 |
| Solyc03g098280.2.1 | Tomato | nucleus | 68.12 | 77.86 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 67.05 | 76.63 |
| CDY41831 | Canola | nucleus | 71.25 | 76.44 |
| CDY68174 | Canola | nucleus | 71.79 | 76.43 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 73.84 | 76.22 |
| AT1G48410.2 | Thale cress | nucleus | 71.25 | 76.0 |
| Bra014136.1-P | Field mustard | nucleus | 71.96 | 74.7 |
| Zm00001d025331_P002 | Maize | cytosol | 36.79 | 74.64 |
| Zm00001d025073_P001 | Maize | cytosol | 25.62 | 73.97 |
| GSMUA_Achr7P04100_001 | Banana | extracellular | 16.07 | 72.58 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 70.0 | 72.19 |
| Bra032254.1-P | Field mustard | nucleus | 71.61 | 72.19 |
| PGSC0003DMT400079716 | Potato | nucleus | 72.32 | 71.87 |
| TraesCS7A01G371200.2 | Wheat | cytosol | 59.64 | 69.44 |
| TraesCS7A01G557400.1 | Wheat | plastid | 63.84 | 69.28 |
| TraesCS6A01G178100.2 | Wheat | plastid | 55.54 | 65.61 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 38.66 | 65.02 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 46.52 | 61.37 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 37.5 | 58.58 |
| TraesCS4A01G288300.1 | Wheat | plastid | 44.82 | 58.58 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 45.09 | 57.65 |
| TraesCS2A01G168900.1 | Wheat | cytosol | 48.04 | 51.88 |
| TraesCS3A01G116800.1 | Wheat | nucleus | 46.07 | 48.82 |
| TraesCS7A01G067500.2 | Wheat | cytosol | 33.39 | 43.79 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 27.05 | 37.36 |
| TraesCS5A01G165900.1 | Wheat | cytosol | 28.75 | 36.47 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 30.0 | 35.97 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 29.38 | 35.92 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 29.46 | 35.68 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 28.66 | 35.63 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 29.2 | 31.17 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 19.11 | 30.35 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 24.82 | 26.1 |
Protein Annotations
| MapMan:16.10.3 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaut_Gly-rich | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF12764 | PFAM:PF16486 | PFAM:PF16487 |
| PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi |
| InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS2A01G403100 | EnsemblPlants:TraesCS2A01G403100.4 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg |
Description
No Description!
Coordinates
chr2A:+:657519057..657525346
Molecular Weight (calculated)
124315.0 Da
IEP (calculated)
9.786
GRAVY (calculated)
-0.584
Length
1120 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVRKKRTGPG SPGESSGEAS GASGQGSSQR AERAPQQHGG GRGLAPQQHG RGGGQHQGRG GHYQGHGGSA SHYPGGGPPE YQQRDYQGRG HPGGGPPEYQ
0101: HRDYQGRGHP GGGPPEYQPR DYQGRGHPGG GPPEYQPRDY QGRGGPRPRG GVPQPYYGGH RGGSAGRNVP PGPSRTVPEL HQAPHVQYQA PVVSPSASGA
0201: GSSSQPVSEV SSGQVQQQFQ KLAIVDQSST SQSSQLAPAS SKSVRFPLRP GKGTHGDRCV VKANHFFAEL PDKDLHQYDV SITPEITSRG VNRAVMAELV
0301: RLYRHSQLDG RLPAYDGRKS LYTAGPLPFP SKTFEITLHD EEESLVGGQV APRHERQFRV VIKFAARADL HHLAMFLAGR QPDAPQEALQ VLDIVLRELP
0401: TARYSPVGRS FYSPNLGRRQ KLGDGLESWR GFYQSIRPTQ MGLSLNIDMS STAFIEPLPV IDFVAQLLSR DISVRPLSDS DRVKIKKALR GVKVEVTHRG
0501: NMRRKYRISG LTSQATRELS FPVDDRGTVK TVVQYFLETY GFNIQHTTLP CLQVGNQQRP NYLPMEVCKI VEGQRYSKRL NEKQITALLK VTCQRPQERE
0601: KDILQTVHHN AYYEDPYAQE FGIKIDERLA SVEARVLPPP RLKYHDSGRE KDVLPRIGQW NMMNKKMVNG GRVSHWACIN FSRNVQDSAA RVFCHELAIM
0701: CQISGMDFAP EPVLPPLTAR PEHVERALKA RYQDAMNIIR PQGRELDLLI VILPDNNGSL YGDLKRICET DLGLVSQCCL TKHVFKMSKQ YLANVALKIN
0801: VKVGGRNTVL VDALTRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEVTK YAGLVSAQAH RQELIQDLFK VWQDPQRGTV TGGMIKELLI
0901: SFKRATGQKP QRIIFYSIFR DGVSEGQFYQ VLLYELDAIR KACASLEPNY QPPVTFVVVQ KRHHTRLFAN NHNDQRTVDR SGNILPGTVV DSKICHPTEF
1001: DFYLCSHAGI QGTSRPAHYH VLWDENKFTA DELQTLTNNL CYTYARCTRS VSIVPPAYYA HLAAFRARFY MEPDTSDSGS MASGARGPTQ GGRNTRPFGN
1101: VAVRPLPALK ENVKRVMFYC
0101: HRDYQGRGHP GGGPPEYQPR DYQGRGHPGG GPPEYQPRDY QGRGGPRPRG GVPQPYYGGH RGGSAGRNVP PGPSRTVPEL HQAPHVQYQA PVVSPSASGA
0201: GSSSQPVSEV SSGQVQQQFQ KLAIVDQSST SQSSQLAPAS SKSVRFPLRP GKGTHGDRCV VKANHFFAEL PDKDLHQYDV SITPEITSRG VNRAVMAELV
0301: RLYRHSQLDG RLPAYDGRKS LYTAGPLPFP SKTFEITLHD EEESLVGGQV APRHERQFRV VIKFAARADL HHLAMFLAGR QPDAPQEALQ VLDIVLRELP
0401: TARYSPVGRS FYSPNLGRRQ KLGDGLESWR GFYQSIRPTQ MGLSLNIDMS STAFIEPLPV IDFVAQLLSR DISVRPLSDS DRVKIKKALR GVKVEVTHRG
0501: NMRRKYRISG LTSQATRELS FPVDDRGTVK TVVQYFLETY GFNIQHTTLP CLQVGNQQRP NYLPMEVCKI VEGQRYSKRL NEKQITALLK VTCQRPQERE
0601: KDILQTVHHN AYYEDPYAQE FGIKIDERLA SVEARVLPPP RLKYHDSGRE KDVLPRIGQW NMMNKKMVNG GRVSHWACIN FSRNVQDSAA RVFCHELAIM
0701: CQISGMDFAP EPVLPPLTAR PEHVERALKA RYQDAMNIIR PQGRELDLLI VILPDNNGSL YGDLKRICET DLGLVSQCCL TKHVFKMSKQ YLANVALKIN
0801: VKVGGRNTVL VDALTRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEVTK YAGLVSAQAH RQELIQDLFK VWQDPQRGTV TGGMIKELLI
0901: SFKRATGQKP QRIIFYSIFR DGVSEGQFYQ VLLYELDAIR KACASLEPNY QPPVTFVVVQ KRHHTRLFAN NHNDQRTVDR SGNILPGTVV DSKICHPTEF
1001: DFYLCSHAGI QGTSRPAHYH VLWDENKFTA DELQTLTNNL CYTYARCTRS VSIVPPAYYA HLAAFRARFY MEPDTSDSGS MASGARGPTQ GGRNTRPFGN
1101: VAVRPLPALK ENVKRVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.