Factsheet for TraesCS2A01G258100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G258200.1	Wheat	cytosol	75.68	99.55
KRG99173	Soybean	cytosol	11.76	66.03
TraesCS1D01G151300.3	Wheat	plastid	59.25	61.13
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	58.79	60.66
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	46.58	52.51
Solyc03g098280.2.1	Tomato	nucleus	54.45	48.67
TraesCS7A01G371200.2	Wheat	cytosol	51.71	47.09
CDY04311	Canola	cytosol, nucleus, plastid	52.17	46.63
Solyc06g072300.2.1	Tomato	nucleus	55.71	46.3
TraesCS5A01G446000.1	Wheat	cytosol	44.86	46.29
PGSC0003DMT400069313	Potato	cytosol	55.48	46.11
Os02t0169400-01	Rice	nucleus	46.0	46.0
AT1G48410.2	Thale cress	nucleus	54.45	45.43
VIT_17s0053g00680.t01	Wine grape	nucleus	55.94	45.16
CDY41831	Canola	nucleus	53.77	45.11
TraesCS2A01G403100.4	Wheat	nucleus	57.65	45.09
TraesCS6A01G178100.2	Wheat	plastid	48.74	45.04
TraesCS4A01G288300.1	Wheat	plastid	44.06	45.04
CDY68174	Canola	nucleus	53.65	44.68
TraesCS6A01G254600.2	Wheat	plastid	55.25	44.61
TraesCS7A01G557400.1	Wheat	plastid	51.94	44.09
Bra014136.1-P	Field mustard	nucleus	53.88	43.74
Bra032254.1-P	Field mustard	nucleus	54.11	42.66
PGSC0003DMT400079716	Potato	nucleus	54.68	42.5
TraesCS4A01G288000.1	Wheat	cytosol	34.7	42.4
CDY23683	Canola	cytosol, nucleus, plastid	52.51	42.36
TraesCS7A01G040700.5	Wheat	endoplasmic reticulum, golgi, vacuole	57.19	41.41
TraesCS7A01G067500.2	Wheat	cytosol	37.9	38.88
TraesCS2A01G168900.1	Wheat	cytosol	44.52	37.61
TraesCS3A01G116800.1	Wheat	nucleus	41.21	34.15
TraesCS7A01G533100.1	Wheat	cytosol	32.31	31.41
TraesCS2A01G414800.1	Wheat	nucleus	33.45	31.37
TraesCS7A01G521000.1	Wheat	nucleus	29.0	31.32
TraesCS3A01G188400.1	Wheat	nucleus	31.39	30.02
TraesCS1A01G445500.1	Wheat	golgi, unclear	31.62	29.95
TraesCS5A01G165900.1	Wheat	cytosol	30.14	29.9
TraesCS2A01G419800.2	Wheat	nucleus	22.49	27.94
TraesCS2A01G419900.1	Wheat	nucleus	28.77	24.02
TraesCS2A01G419500.1	Wheat	nucleus	26.37	21.69

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170
PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF102	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS2A01G258100
EnsemblPlants:TraesCS2A01G258100.1	TIGR:cd02846	TIGR:cd04657	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:-:401198029..401216884

Molecular Weight (calculated)

98515.1 Da

IEP (calculated)

9.177

GRAVY (calculated)

-0.230

Length

876 amino acids

Sequence
(BLAST)

001: MSCMPCLRAR AMRKKNRNLR SSGGDEGGIT SGLSSRHPFS IPKRNGFVSV GESCILKTNH FKPSTYCDNI YRYEVFMNYE FLSSGPSHAT AISCGVKRAV
101: MRKLCKMYRE SHLRGRRPAY DGRNRLYASG PFSFESETFV ITLQNEEDSL DYGQTPQRPT TVFSVTITYN AFLTGAIDSE EFIQACNTVL CESPIEGHFR
201: VGRSFYRSSA MFHELGGGLK GCCGFYRSIQ RSQMGLSLNI DTSYKAFIKP QLVIDFVAEL LCRRISDGPI NYIERLKIAK ALHGIKVYVT HRGDVRKKYR
301: ISGLSSEGAS KLSFPVGDHG TQKTVMQYFQ EKHGYDIQHF VLPCLQVGNQ QRPNYLPMEV CKIAEGQHYR EQLNEEQLSA LREVTCQRPI EKELAILQTS
401: KLYNADPYTK EFGITFYNKL TTVEGRVLPP PYLKFLDRTG KNDVLVLPKV GKWDMWCKKM VNGGVVNTWA CINFAWEVTD AHALNFCDEL VLMCNVSGMD
501: LRPEPVLPVA AYDPKSVARS LKKHHKRVMN ILGPRRQKLD LLILILPDNN GTLYGDIKRI LETDIGVVSQ CCLAKHVFMP KKQYFANVAL KINVKAGGRN
601: TVLVSALERK LPRIGKIPTI IFGADVSHPH PGEGCSSPSI AAVVASQDWP EITKYAGLVS PQTHREEVIN NLFNEETGGM IKEHLISFRR ATGCIPGRII
701: FYRDGVSNGQ LNQVLDVELS AIKKACASLD PCYSPRVTFV VVQKRHHTRL FSDNYDVVST IYGSGNVLPG TVIDKEVCHP TDFDFYLCSH AVTKGVSRPV
801: RYHVLWDENK FTANALQTLT NHLCYTYARC TSSVSVVPPV YYAHLLASRG RLYIKRGHEG SFPVLSENVK GVMFFC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.