Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 96.53 | 96.53 |
| TraesCS2B01G195200.2 | Wheat | nucleus | 92.29 | 94.94 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 73.38 | 90.27 |
| Zm00001d015926_P001 | Maize | nucleus | 15.53 | 71.56 |
| OQU88608 | Sorghum | plastid | 59.5 | 70.03 |
| TraesCS5A01G446000.1 | Wheat | cytosol | 55.16 | 67.37 |
| Zm00001d018436_P001 | Maize | cytosol | 7.71 | 65.57 |
| Zm00001d005045_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 13.98 | 62.77 |
| Os07t0188000-01 | Rice | nucleus | 62.49 | 61.6 |
| TraesCS4A01G288300.1 | Wheat | plastid | 50.82 | 61.49 |
| Zm00001d007786_P001 | Maize | nucleus | 59.5 | 59.79 |
| TraesCS4A01G288000.1 | Wheat | cytosol | 39.92 | 57.74 |
| CDX71410 | Canola | nucleus | 51.3 | 55.88 |
| CDY04517 | Canola | plastid | 50.82 | 55.07 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 54.68 | 54.94 |
| Bra011993.1-P | Field mustard | plastid | 50.92 | 54.66 |
| KRH25139 | Soybean | plastid | 50.14 | 54.11 |
| KRH30536 | Soybean | plastid | 46.29 | 53.93 |
| AT2G27880.1 | Thale cress | cytosol, nucleus, plastid | 50.82 | 52.86 |
| TraesCS7A01G371200.2 | Wheat | cytosol | 48.12 | 51.87 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 42.53 | 51.82 |
| Zm00001d025691_P001 | Maize | mitochondrion | 9.64 | 51.28 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 32.5 | 50.6 |
| Solyc06g074730.2.1 | Tomato | nucleus | 48.41 | 49.65 |
| TraesCS6A01G178100.2 | Wheat | plastid | 45.13 | 49.37 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 48.79 | 49.37 |
| TraesCS7A01G557400.1 | Wheat | plastid | 47.83 | 48.06 |
| TraesCS2A01G403100.4 | Wheat | nucleus | 51.88 | 48.04 |
| TraesCS6A01G254600.2 | Wheat | plastid | 50.05 | 47.83 |
| TraesCS7A01G067500.2 | Wheat | cytosol | 37.9 | 46.02 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 37.61 | 44.52 |
| TraesCS7A01G040700.5 | Wheat | endoplasmic reticulum, golgi, vacuole | 51.69 | 44.3 |
| TraesCS3A01G116800.1 | Wheat | nucleus | 42.72 | 41.91 |
| TraesCS2A01G414800.1 | Wheat | nucleus | 31.15 | 34.58 |
| TraesCS7A01G521000.1 | Wheat | nucleus | 26.62 | 34.03 |
| TraesCS5A01G165900.1 | Wheat | cytosol | 28.54 | 33.52 |
| TraesCS7A01G533100.1 | Wheat | cytosol | 28.54 | 32.85 |
| TraesCS3A01G188400.1 | Wheat | nucleus | 28.83 | 32.64 |
| TraesCS1A01G445500.1 | Wheat | golgi, unclear | 29.03 | 32.54 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 30.47 | 30.12 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 20.06 | 29.5 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 25.65 | 24.98 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF24 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf |
| SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS2A01G168900 |
| EnsemblPlants:TraesCS2A01G168900.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:+:123130472..123137172
Molecular Weight (calculated)
113024.0 Da
IEP (calculated)
9.691
GRAVY (calculated)
-0.413
Length
1037 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASRGVGYGG GRGGRGDGAG RRPGGRGDGR GRGSGGRGEA GGGDYGRGDG GGRGPGAPTP GAGEYNQQAP PARVDARGRG PGGPAGFRPA APRPAAPAVP
0101: ATASTSSSRA PPSSATMAPA DALARDVGRL TVEAPPAPRS SAPAAAGAPA LRPPAQPAAA GGSQPESQAP APAPPAATPV SSKSVAPPGR PGFGTEGRKM
0201: IVRANHFLVG FADKYICHYD VAITPEPKTR RINRVLMTEL TSKHRVSSLS GLLVAYDGSK SLYTAGELPF QAMDFSIKLG KPPRETEYKV TIRFAARANL
0301: YHLQQFLSGK QRDSPQDTIQ ALDVVLRESP SLNYVTVSRS FYSTIFGQRD IGDGLECWRG YYQSLRPTQM GLSLNIDISS TPFYKPISVM QFVQECLNLR
0401: NPDPNRPLSD RDRLKLRTAL RGIRVETTHQ EGKRSAYKIT GITSVPLIQL NFPLDEGNQM TVVQYFWGRY KYRLRFTSWP CLQSGNDSRP IYLPMEVCKI
0501: IEGQRFTRKL NEKQVTGILR ATCERPRDRE NSILKMVEHN NYSADKLAQE FGIDVTDKMV NVQARVLPPP MLKYHESGKD KACAPSVGQW NMIGKKMING
0601: GNVQRWTCLN FSRLHIDGVK RFCGDLVKMC NAIGMVFNPM PVVEILSASA NNIEGALKDA HQSARDLQLL IVILPDVTGH YGKVKKVCET DLGIVSQCLK
0701: PDKVERANKQ YFENVALKVN VKAGGRNTAL QQALTRQIPL VTDQPTIFFG ADVTHPAAGD DSSPSIAAVV ASMDWPEITK YKAVVSAQPP RQEIIQDLYC
0801: TGIDPEKGTP VHSGMMRELL VSFFQKTKHK PSRIIFYRDG VSEGQFAQVL MYEMDAIRKA CASLQEDYQP PVTFVVVQKR HHTRLFPEVH GKETDKSGNI
0901: LPGTVVDTNI CHPTEFDFYL CSHAGIQGTS RPTHYHVLFD ENRFTADGLQ LLTNNLCYTY ARCTRSVSVV PPAYYAHLAA FRARYYDEPS EGSDSASIVS
1001: GGTRESAATG AGAAGPPGTY RRLPRIRDNV KDVMFYC
0101: ATASTSSSRA PPSSATMAPA DALARDVGRL TVEAPPAPRS SAPAAAGAPA LRPPAQPAAA GGSQPESQAP APAPPAATPV SSKSVAPPGR PGFGTEGRKM
0201: IVRANHFLVG FADKYICHYD VAITPEPKTR RINRVLMTEL TSKHRVSSLS GLLVAYDGSK SLYTAGELPF QAMDFSIKLG KPPRETEYKV TIRFAARANL
0301: YHLQQFLSGK QRDSPQDTIQ ALDVVLRESP SLNYVTVSRS FYSTIFGQRD IGDGLECWRG YYQSLRPTQM GLSLNIDISS TPFYKPISVM QFVQECLNLR
0401: NPDPNRPLSD RDRLKLRTAL RGIRVETTHQ EGKRSAYKIT GITSVPLIQL NFPLDEGNQM TVVQYFWGRY KYRLRFTSWP CLQSGNDSRP IYLPMEVCKI
0501: IEGQRFTRKL NEKQVTGILR ATCERPRDRE NSILKMVEHN NYSADKLAQE FGIDVTDKMV NVQARVLPPP MLKYHESGKD KACAPSVGQW NMIGKKMING
0601: GNVQRWTCLN FSRLHIDGVK RFCGDLVKMC NAIGMVFNPM PVVEILSASA NNIEGALKDA HQSARDLQLL IVILPDVTGH YGKVKKVCET DLGIVSQCLK
0701: PDKVERANKQ YFENVALKVN VKAGGRNTAL QQALTRQIPL VTDQPTIFFG ADVTHPAAGD DSSPSIAAVV ASMDWPEITK YKAVVSAQPP RQEIIQDLYC
0801: TGIDPEKGTP VHSGMMRELL VSFFQKTKHK PSRIIFYRDG VSEGQFAQVL MYEMDAIRKA CASLQEDYQP PVTFVVVQKR HHTRLFPEVH GKETDKSGNI
0901: LPGTVVDTNI CHPTEFDFYL CSHAGIQGTS RPTHYHVLFD ENRFTADGLQ LLTNNLCYTY ARCTRSVSVV PPAYYAHLAA FRARYYDEPS EGSDSASIVS
1001: GGTRESAATG AGAAGPPGTY RRLPRIRDNV KDVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.