Factsheet for Zm00001d005045_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

mitochondrion 1
peroxisome 1
plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018436_P001	Maize	cytosol	38.53	72.95
Zm00001d015926_P001	Maize	nucleus	46.32	47.56
Zm00001d026146_P001	Maize	nucleus	27.71	43.84
Zm00001d036886_P001	Maize	plastid	37.23	38.05
Zm00001d032611_P002	Maize	vacuole	49.78	30.91
Zm00001d039440_P001	Maize	cytosol	31.6	29.92
Zm00001d025691_P001	Maize	mitochondrion	22.94	27.18
Zm00001d009158_P003	Maize	golgi	41.56	21.97
Zm00001d025073_P001	Maize	cytosol	34.63	20.62
Zm00001d025331_P002	Maize	cytosol	46.32	19.38
Zm00001d035554_P001	Maize	plastid	40.69	18.69
HORVU2Hr1G031130.2	Barley	cytosol, nucleus	61.47	16.84
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	58.44	15.86
Zm00001d007786_P001	Maize	nucleus	70.13	15.7
KRH25139	Soybean	plastid	61.9	14.88
Zm00001d013063_P001	Maize	nucleus	64.5	14.75
CDX71410	Canola	nucleus	60.61	14.71
CDY04517	Canola	plastid	60.61	14.63
Bra011993.1-P	Field mustard	plastid	60.61	14.49
TraesCS2B01G195200.2	Wheat	nucleus	61.9	14.19
TraesCS2A01G168900.1	Wheat	cytosol	62.77	13.98
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	62.34	13.95
AT2G27880.1	Thale cress	cytosol, nucleus, plastid	60.17	13.94
TraesCS2D01G176500.1	Wheat	golgi, unclear	62.34	13.89
KRH30536	Soybean	plastid	52.81	13.71
Zm00001d036917_P009	Maize	nucleus	57.14	13.66
Zm00001d013542_P003	Maize	nucleus	60.61	13.27
PGSC0003DMT400018363	Potato	cytosol, nucleus, plastid	58.87	13.27
Os07t0188000-01	Rice	nucleus	60.17	13.21
Solyc06g074730.2.1	Tomato	nucleus	57.58	13.16
Zm00001d046438_P003	Maize	cytosol	57.14	13.13
Zm00001d026111_P014	Maize	nucleus	60.17	12.69
Zm00001d011096_P059	Maize	nucleus	59.74	12.45
Zm00001d002650_P003	Maize	nucleus	60.17	12.34
Zm00001d014875_P001	Maize	nucleus	57.14	12.23
Zm00001d035747_P027	Maize	endoplasmic reticulum, plastid	59.74	12.01
Zm00001d033518_P001	Maize	nucleus	60.17	11.71
Zm00001d021345_P001	Maize	nucleus	46.75	11.63
Zm00001d006351_P001	Maize	nucleus	49.78	10.92
Zm00001d002316_P003	Maize	plastid	40.26	10.86
Zm00001d026300_P001	Maize	nucleus	39.39	10.33
Zm00001d019905_P003	Maize	nucleus	40.69	10.21
Zm00001d008249_P012	Maize	nucleus	38.96	10.0
Zm00001d040429_P012	Maize	nucleus	38.96	9.99
Zm00001d039214_P025	Maize	nucleus	39.39	9.85
Zm00001d033206_P001	Maize	cytosol	41.13	9.83
Zm00001d029573_P001	Maize	cytosol	41.99	9.4
Zm00001d044183_P001	Maize	cytosol	7.36	9.39
Zm00001d037833_P001	Maize	mitochondrion	9.09	8.47

Protein Annotations

EnsemblPlants:Zm00001d005045_P001	EnsemblPlants:Zm00001d005045_T001	EnsemblPlantsGene:Zm00001d005045	Gene3D:3.30.420.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR003165	InterPro:IPR036397	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
PANTHER:PTHR22891	PANTHER:PTHR22891:SF24	PFAM:PF02171	PFscan:PS50822	ProteinID:ONM20052.1	SMART:SM00950
SUPFAM:SSF53098	UniParc:UPI00084543A7	UniProt:A0A1D6EIX2	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2:+:155849179..155854203

Molecular Weight (calculated)

26160.2 Da

IEP (calculated)

6.708

GRAVY (calculated)

-0.326

Length

231 amino acids

Sequence
(BLAST)

001: MSLPREGRLP FPDPPTASSA LPSFVSRMPV KWEPPSSQML EYSPNNEDMW EPDLRGGGAP SFLGMTRCGQ QRRWVATNRW STTMILDDDA RDGISEGQFN
101: YVLILEMDAI RKACASLEDG YLPPVTFVVI QKRHHTRLFP RVHGRRDVTD RSGNILPGTV VDTEICHPRE FDFYLCSHAG IQGTSRPIHY HVLYDENRFS
201: ADGLQILTNN LCYTYARCTH AVSIVILAFS L

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.