Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91156 | Sorghum | nucleus | 76.71 | 79.25 |
| TraesCS3B01G135800.1 | Wheat | cytosol | 47.2 | 54.22 |
| TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 46.89 | 53.93 |
| Os07t0471300-01 | Rice | nucleus | 38.41 | 49.93 |
| Zm00001d021345_P001 | Maize | nucleus | 47.52 | 49.41 |
| Zm00001d006351_P001 | Maize | nucleus | 51.04 | 46.82 |
| Zm00001d015926_P001 | Maize | nucleus | 10.66 | 45.78 |
| TraesCS3A01G116800.1 | Wheat | nucleus | 49.59 | 45.32 |
| HORVU3Hr1G021290.1 | Barley | cytosol, nucleus | 49.17 | 45.2 |
| Zm00001d018436_P001 | Maize | cytosol | 5.69 | 45.08 |
| Zm00001d005045_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 9.83 | 41.13 |
| Zm00001d026146_P001 | Maize | nucleus | 6.21 | 41.1 |
| Zm00001d025073_P001 | Maize | cytosol | 15.94 | 39.69 |
| Zm00001d036917_P009 | Maize | nucleus | 39.65 | 39.65 |
| Zm00001d046438_P003 | Maize | cytosol | 39.86 | 38.31 |
| Zm00001d025331_P002 | Maize | cytosol | 21.74 | 38.04 |
| Zm00001d036886_P001 | Maize | plastid | 8.7 | 37.17 |
| Zm00001d044183_P001 | Maize | cytosol | 6.94 | 37.02 |
| Zm00001d032611_P002 | Maize | vacuole | 14.08 | 36.56 |
| Zm00001d025691_P001 | Maize | mitochondrion | 7.25 | 35.9 |
| Zm00001d037833_P001 | Maize | mitochondrion | 9.11 | 35.48 |
| Zm00001d002650_P003 | Maize | nucleus | 41.3 | 35.44 |
| Zm00001d026111_P014 | Maize | nucleus | 39.65 | 34.98 |
| Zm00001d011096_P059 | Maize | nucleus | 39.65 | 34.57 |
| Zm00001d014875_P001 | Maize | nucleus | 37.89 | 33.92 |
| Zm00001d035747_P027 | Maize | endoplasmic reticulum, plastid | 40.27 | 33.86 |
| Zm00001d009158_P003 | Maize | golgi | 15.11 | 33.41 |
| Zm00001d013542_P003 | Maize | nucleus | 36.34 | 33.27 |
| Zm00001d013063_P001 | Maize | nucleus | 34.27 | 32.77 |
| Zm00001d007786_P001 | Maize | nucleus | 34.37 | 32.17 |
| Zm00001d033518_P001 | Maize | nucleus | 36.85 | 29.99 |
| Zm00001d040429_P012 | Maize | nucleus | 26.71 | 28.63 |
| Zm00001d019905_P003 | Maize | nucleus | 26.81 | 28.12 |
| Zm00001d008249_P012 | Maize | nucleus | 26.19 | 28.11 |
| Zm00001d039214_P025 | Maize | nucleus | 26.19 | 27.38 |
| Zm00001d002316_P003 | Maize | plastid | 23.81 | 26.87 |
| Zm00001d039440_P001 | Maize | cytosol | 6.63 | 26.23 |
| Zm00001d026300_P001 | Maize | nucleus | 23.91 | 26.22 |
| Zm00001d029573_P001 | Maize | cytosol | 27.95 | 26.16 |
| Zm00001d035554_P001 | Maize | plastid | 10.87 | 20.87 |
Protein Annotations
| EntrezGene:100279313 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | UniProt:A0A1D6KWX6 |
| InterPro:ArgoL1 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | ProteinID:ONM06965.1 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFscan:PS50821 | PFscan:PS50822 |
| PANTHER:PTHR22891 | PANTHER:PTHR22891:SF103 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 |
| SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI000844226C | EnsemblPlantsGene:Zm00001d033206 |
| EnsemblPlants:Zm00001d033206_P001 | EnsemblPlants:Zm00001d033206_T001 | SEG:seg | : | : | : |
Description
argonaute18b argonaute18b
Coordinates
chr1:+:254172779..254178271
Molecular Weight (calculated)
108798.0 Da
IEP (calculated)
8.209
GRAVY (calculated)
-0.373
Length
966 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRHPPVDEA MDFNGNGRDE ANPSGSEAGN HNEHRGDDPS RVGQSLPADI RQNGQPTLGE EITAPLWEEF EALGIHVRRS EPVFPPRPGY GAAGTPYVVR
101: ANLFLGRLVD EALHQYNVTI SPEPTPKAAY REIMTKLLSE NQHTDFDGRF SVYDDGDSLF TAGALPFDTK EFEVPLSAGG DEKMDRKYKV MINHAATISL
201: LQLRMLLAGY PTDIPAQALV VLDTVLRDVF NERNDMECVV IDKKDRTLGV DAWKGLYLSI RPTQNCLSLI ADVSSSVFVQ PLLLIEFVQK ILKIDAVDRN
301: LTKPEYDKLL KALRGVRIQV THRDNRRRVW SKKKDNRRQL STYRVAGLSV NPTNDLSFES KVGVTTTVID YFREIYGLEL KYKYLPCVNA GSEQDPIYFP
401: IEVGNYVLLN FNMISYSSVL LSLPRSSAIS ECKIEFQVCK IAPKQCYQKK LEGSQFSTPR KSAWIHPEAE QSCPQIVEQR QYKQTKRANE FDLEFDGNLT
501: TVAARVLLPP NLKYDDSVSQ KTWFPLDGYW NMKDKKVING AKIRNWACLN FCEDLSKEDI KKFCFKLAEM SRITGLDFAD LKLPIFTARP DRVEDGIRRC
601: YQEAKNKLRD QKIDLLLAIL PDKKDSLYGN IKRICETDIG LVSQCCRRSR VLVNNNQILA NIAIKINAKV GGRISVFDDV QKSLPVVSNK PTIIFGAHVS
701: HPSVVDGSTG PSIASVVASQ DWHEVSKYNG VVRAQGHTEE IGGLEDIVKE LLHAFANESK EKLQQLIFYR DGISEGQFNR ILEKEIPAIE KAWNALYDNE
801: KPQITFVVVQ KRHKLRLFPV DDNYKIRSAK KKIVEPGTVV DSEICHPAEF DFFLCSQSGG IKGPRRPVRY LVLRDDNNFT ADELQALTNN LCYTFLTVCP
901: VLSLISYSGG NRSLSVAPPA YYAQKLAHRA RVYLAKGSDN NAAAANGGRK QIPEIKNELK GSMFYC
101: ANLFLGRLVD EALHQYNVTI SPEPTPKAAY REIMTKLLSE NQHTDFDGRF SVYDDGDSLF TAGALPFDTK EFEVPLSAGG DEKMDRKYKV MINHAATISL
201: LQLRMLLAGY PTDIPAQALV VLDTVLRDVF NERNDMECVV IDKKDRTLGV DAWKGLYLSI RPTQNCLSLI ADVSSSVFVQ PLLLIEFVQK ILKIDAVDRN
301: LTKPEYDKLL KALRGVRIQV THRDNRRRVW SKKKDNRRQL STYRVAGLSV NPTNDLSFES KVGVTTTVID YFREIYGLEL KYKYLPCVNA GSEQDPIYFP
401: IEVGNYVLLN FNMISYSSVL LSLPRSSAIS ECKIEFQVCK IAPKQCYQKK LEGSQFSTPR KSAWIHPEAE QSCPQIVEQR QYKQTKRANE FDLEFDGNLT
501: TVAARVLLPP NLKYDDSVSQ KTWFPLDGYW NMKDKKVING AKIRNWACLN FCEDLSKEDI KKFCFKLAEM SRITGLDFAD LKLPIFTARP DRVEDGIRRC
601: YQEAKNKLRD QKIDLLLAIL PDKKDSLYGN IKRICETDIG LVSQCCRRSR VLVNNNQILA NIAIKINAKV GGRISVFDDV QKSLPVVSNK PTIIFGAHVS
701: HPSVVDGSTG PSIASVVASQ DWHEVSKYNG VVRAQGHTEE IGGLEDIVKE LLHAFANESK EKLQQLIFYR DGISEGQFNR ILEKEIPAIE KAWNALYDNE
801: KPQITFVVVQ KRHKLRLFPV DDNYKIRSAK KKIVEPGTVV DSEICHPAEF DFFLCSQSGG IKGPRRPVRY LVLRDDNNFT ADELQALTNN LCYTFLTVCP
901: VLSLISYSGG NRSLSVAPPA YYAQKLAHRA RVYLAKGSDN NAAAANGGRK QIPEIKNELK GSMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.