Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G135800.1 | Wheat | cytosol | 68.98 | 86.21 |
| TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 68.89 | 86.19 |
| TraesCS3A01G116800.1 | Wheat | nucleus | 85.16 | 84.67 |
| EER97198 | Sorghum | nucleus | 61.94 | 62.36 |
| Zm00001d006351_P001 | Maize | nucleus | 61.47 | 61.35 |
| Zm00001d021345_P001 | Maize | nucleus | 53.47 | 60.5 |
| Os07t0471300-01 | Rice | nucleus | 40.53 | 57.34 |
| EER91156 | Sorghum | nucleus | 46.62 | 52.41 |
| Zm00001d033206_P001 | Maize | cytosol | 45.2 | 49.17 |
| HORVU2Hr1G031130.2 | Barley | cytosol, nucleus | 37.77 | 47.09 |
| HORVU6Hr1G036840.2 | Barley | plastid | 40.82 | 45.21 |
| HORVU7Hr1G120600.3 | Barley | cytosol, nucleus | 45.48 | 44.92 |
| HORVU2Hr1G045050.1 | Barley | cytosol, mitochondrion, plastid | 8.18 | 42.16 |
| HORVU4Hr1G004030.1 | Barley | mitochondrion | 40.53 | 41.24 |
| HORVU7Hr1G007000.14 | Barley | nucleus | 45.58 | 39.36 |
| HORVU2Hr1G103840.1 | Barley | cytosol | 7.99 | 33.6 |
| HORVU0Hr1G012490.1 | Barley | nucleus | 28.07 | 33.41 |
| HORVU3Hr1G038830.1 | Barley | nucleus | 28.64 | 32.65 |
| HORVU0Hr1G005350.1 | Barley | cytosol, golgi, mitochondrion | 28.83 | 29.94 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 29.5 | 29.61 |
| HORVU7Hr1G107770.1 | Barley | nucleus | 15.98 | 28.09 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 24.36 | 25.12 |
| OQU89939 | Sorghum | endoplasmic reticulum, plasma membrane | 22.36 | 23.34 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | UniProt:A0A287KDI2 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | EnsemblPlantsGene:HORVU3Hr1G021290 |
| EnsemblPlants:HORVU3Hr1G021290.1 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF103 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| UniParc:UPI000B483C81 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:68596766..68603419
Molecular Weight (calculated)
114184.0 Da
IEP (calculated)
9.334
GRAVY (calculated)
-0.557
Length
1051 amino acids
Sequence
(BLAST)
(BLAST)
0001: GGGGGGGGGG GDGRGRGYYQ GQGGGDGGGR GRGRGYYQGD GGGRGYYQGG GDGGGRGHGY YQGEGDDRGY YQGGGDSGGG GRGRGYQGGG DGGGRGRGRG
0101: YQGGGDGGGR GRGYEGAGDG GRGRGRGYDG AGDGGRGGGR GYDGAGDGGR GRGYQQGGND YGGGRGGNNY GGRGGRGGRG QKQPPPVFPQ AGPLLSERYH
0201: AEAAQLREKF QAMDISRAEP TFPARPGFGT TGQVCLVRAN HFFVGLVDKG LHQYDVSISP EPKMKGVFRA VMSRLVTEHQ DTTLGGRLPA YDGRKNLYTA
0301: GELPFNTKEF EVTLPDKNPG PPGQRRERQF KVTIKHATLV SLQQLQMLMA GISTDIPAQA LQVLDIVLRD IVLNEQDDMG IVPVGRSFFS RTINEPIPLG
0401: KGIEGWNGFY QSIRPTQSGL SLNIDMSSTA FVRGGSLIDF IKDVLNWRGP IRAINEFDHV KIKKALRGLR VEVTHRGEVR RKYRIAGLTK DTARDLRFKL
0501: STGETKTVRD YFQETYKLQL NYDFLPCLQV GTEQKPNYLP LEVCNIVPGQ RYQKKLDDSQ VSNIMRIACQ NPGGRETSIR ESVLKNKYNS AKRANEFGIE
0601: VDNNATSVQA RVLPAPVLSY HGSASCYPEK GAWNMKGKKV INGAKVGLWA CVNFCTDLSE DQVRNFCRGL IEVSTATGVN FNDAKLQIFY ARSDQVEARL
0701: HEVHQQAGKL KIDLVLAILP DKNGSLYGDI KRICETDIGL MSQCCLHKNV LKSNTQFLAN VALKINAKCG GRNSVFADLK LSLPVVCEKP TIIFGADVTH
0801: PSALDDTAPS IASVVASQDW PQVTKYHGDV HEQGHRVERI EGLEGIAKKL LLSFEQHSKH KPQQLIFYRD GVSEGQFRMV LENEIPEIEK AWKALYNVKP
0901: PITFIVVQKR HHTRLFPSDG KYQDDSGNVM PGTVVDRQIC HPTEFDFFLC SHAGIKGTSR PAHYHVLRDD NNFSADDLQS LTNNLCYTYA SCTRSVSTAP
1001: PAYYAHKLAF RARFYLAQVP DMASEISAGS AASSLTLPAI KDELKSHMFY C
0101: YQGGGDGGGR GRGYEGAGDG GRGRGRGYDG AGDGGRGGGR GYDGAGDGGR GRGYQQGGND YGGGRGGNNY GGRGGRGGRG QKQPPPVFPQ AGPLLSERYH
0201: AEAAQLREKF QAMDISRAEP TFPARPGFGT TGQVCLVRAN HFFVGLVDKG LHQYDVSISP EPKMKGVFRA VMSRLVTEHQ DTTLGGRLPA YDGRKNLYTA
0301: GELPFNTKEF EVTLPDKNPG PPGQRRERQF KVTIKHATLV SLQQLQMLMA GISTDIPAQA LQVLDIVLRD IVLNEQDDMG IVPVGRSFFS RTINEPIPLG
0401: KGIEGWNGFY QSIRPTQSGL SLNIDMSSTA FVRGGSLIDF IKDVLNWRGP IRAINEFDHV KIKKALRGLR VEVTHRGEVR RKYRIAGLTK DTARDLRFKL
0501: STGETKTVRD YFQETYKLQL NYDFLPCLQV GTEQKPNYLP LEVCNIVPGQ RYQKKLDDSQ VSNIMRIACQ NPGGRETSIR ESVLKNKYNS AKRANEFGIE
0601: VDNNATSVQA RVLPAPVLSY HGSASCYPEK GAWNMKGKKV INGAKVGLWA CVNFCTDLSE DQVRNFCRGL IEVSTATGVN FNDAKLQIFY ARSDQVEARL
0701: HEVHQQAGKL KIDLVLAILP DKNGSLYGDI KRICETDIGL MSQCCLHKNV LKSNTQFLAN VALKINAKCG GRNSVFADLK LSLPVVCEKP TIIFGADVTH
0801: PSALDDTAPS IASVVASQDW PQVTKYHGDV HEQGHRVERI EGLEGIAKKL LLSFEQHSKH KPQQLIFYRD GVSEGQFRMV LENEIPEIEK AWKALYNVKP
0901: PITFIVVQKR HHTRLFPSDG KYQDDSGNVM PGTVVDRQIC HPTEFDFFLC SHAGIKGTSR PAHYHVLRDD NNFSADDLQS LTNNLCYTYA SCTRSVSTAP
1001: PAYYAHKLAF RARFYLAQVP DMASEISAGS AASSLTLPAI KDELKSHMFY C
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.