CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006351_P001	Maize	nucleus	87.84	87.08
TraesCS3D01G118600.1	Wheat	cytosol, mitochondrion, nucleus	52.68	65.48
TraesCS3B01G135800.1	Wheat	cytosol	52.68	65.4
HORVU3Hr1G021290.1	Barley	cytosol, nucleus	62.36	61.94
TraesCS3A01G116800.1	Wheat	nucleus	62.55	61.78
Os07t0471300-01	Rice	nucleus	41.67	58.55
EER91156	Sorghum	nucleus	49.04	54.76
EER90726	Sorghum	cytosol	39.08	48.06
KXG20286	Sorghum	cytosol	44.25	47.09
OQU82149	Sorghum	nucleus	47.89	46.43
KXG20965	Sorghum	nucleus	46.26	46.09
OQU91197	Sorghum	plastid	38.89	45.93
OQU91198	Sorghum	nucleus	32.66	45.9
OQU88608	Sorghum	plastid	37.93	44.95
EES18841	Sorghum	nucleus	47.32	44.54
OQU86027	Sorghum	plastid	43.39	41.03
KXG23356	Sorghum	nucleus	29.12	34.51
EES00570	Sorghum	nucleus	28.07	32.63
EES18816	Sorghum	nucleus	28.07	32.23
OQU86696	Sorghum	nucleus	27.49	31.89
EER92100	Sorghum	cytosol	29.12	29.43
KXG27113	Sorghum	nucleus	30.08	28.75
EER93271	Sorghum	cytosol	23.95	24.7
OQU89939	Sorghum	endoplasmic reticulum, plasma membrane	21.74	22.54

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	EntrezGene:8074221	InterPro:ArgoL1
InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	UniProt:C5X8G4	EnsemblPlants:EER97198	ProteinID:EER97198
ProteinID:EER97198.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397
ProteinID:OQU89941.1	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699
PFAM:PF16486	PFAM:PF16487	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF103	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950
SMART:SM01163	EnsemblPlantsGene:SORBI_3002G299200	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI0001A83B28	RefSeq:XP_002460677.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:67478381..67485157

Molecular Weight (calculated)

114162.0 Da

IEP (calculated)

9.737

GRAVY (calculated)

-0.491

Length

1044 amino acids

Sequence
(BLAST)

0001: MASHQRGGGR VGGGGGRGQA NHNVSQGQGG RGYGGRGGQY YGDDSGGRGG GRGGGGRGGG RGFDGRGGGY QEARGGGRGG GGGYQEGGRG GRGGGGGYQE
0101: GRGGGRGGGG YYEGHGGGRG GGGYQGGGRG GGGGYNDGRG GGRGGRGYQG QGGSDYGRDR GFGGLQPPRP DLRQAGPPLA DRYAADAAAL REKFKTMDIY
0201: RDAPMFPARP GFGAMGTPCV VRANHFFVGL VDKGLHHYDV TISPETTLKG VYRQVMSKLV SENRQTELGG RLPAYDGKKS LFTAGELPFK SKEFVVTLPG
0301: RVERRYKVVI KHATAVSLHQ LFMLMAGYPT DIPMQALQVL DIVLRDIVLN ERNSMEYVAV GRSFFSPLVK PGPKNLGLGV EGWNGFYQSI RPTQKGLSVV
0401: VDMSSTAFVR PMPLIEFVME ILNKDSRTIR NITPMELVKL KKALRGVRIE VTHRGDARRK YRIASLTTSP PSLQFFESSA GVQKSVADYF REAYNLEMHY
0501: DSLPCLQVGS DERPNYLPME VCKIVAGQQY RKKLDGQQVL NLMDSTCLRP SDRENNIRQV VEQNDYNRTE RASEFGLEVD YHPTSVNARV LPAPTLKYRG
0601: TGSESLCCPK DGQWNMIKKQ VVHGARVGNW ACVNFCHNLP RDVVGKFCSD LVKWSRTTGV DMDNLRIPIY AVRPEQVETD LHKLCHDAGN RLRVQKIDLL
0701: LAILPEKNGN LYGNFKRICE TEIGIMSQCC LDKNVRSAGP PYFANVAIKI NAKFGGRNLE FANPKESLPV VSIEPTIIFG ADVTHPAALD DTAPSIASVV
0801: ASQDWPTVAN YNGIARAQGH RKELIDGLED IVKELLLAFQ ERSKQRPKQL IFYRDGVSEG QFKQVLEQEI PEIEKAWKAL YNEKPKITFI VVQKRHHTRL
0901: FPNDRQWTDR SGNILPGTVV DKSICHPTEF DFFLCSHAGI KGTSRPTHYH VLRDDNKFTA DALQSLTYNL CYLYSSCTRS VSIAPPAYYA HKLAFRARFY
1001: INQGYDTATS VGSFGSSAPP ATAGPGLKPL PEIKGELKRL MFYC

Best Arabidopsis Sequence Match ( AT1G48410.3 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.