Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026300_P001 | Maize | nucleus | 73.63 | 91.26 |
| Zm00001d002316_P003 | Maize | plastid | 70.33 | 89.72 |
| Os04t0615700-01 | Rice | nucleus, plasma membrane | 70.05 | 73.98 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 67.12 | 70.01 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 67.03 | 69.85 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 67.03 | 69.78 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 66.58 | 69.5 |
| KRH36727 | Soybean | nucleus | 19.05 | 45.92 |
| PGSC0003DMT400054667 | Potato | cytosol | 29.21 | 43.7 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 37.82 | 43.57 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 38.0 | 42.39 |
| KRG89432 | Soybean | nucleus | 37.18 | 42.03 |
| CDY70429 | Canola | plastid | 33.52 | 41.26 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 36.9 | 40.54 |
| Solyc02g069270.2.1 | Tomato | cytosol | 35.99 | 40.23 |
| AT1G31280.1 | Thale cress | nucleus | 37.0 | 39.84 |
| CDY02373 | Canola | nucleus | 36.9 | 39.39 |
| Bra023172.1-P | Field mustard | nucleus | 37.27 | 39.25 |
| Bra040815.1-P | Field mustard | cytosol | 36.26 | 39.25 |
| Solyc02g069260.2.1 | Tomato | nucleus | 37.18 | 38.96 |
| Solyc02g069280.2.1 | Tomato | nucleus | 35.62 | 38.94 |
| CDY25885 | Canola | cytosol | 35.99 | 38.91 |
| CDY55876 | Canola | cytosol | 36.72 | 38.74 |
| PGSC0003DMT400054669 | Potato | cytosol | 37.18 | 38.63 |
| KRH11732 | Soybean | nucleus | 35.26 | 37.13 |
| PGSC0003DMT400054661 | Potato | nucleus | 32.33 | 36.02 |
| OQU91198 | Sorghum | nucleus | 23.53 | 34.59 |
| AT1G31290.1 | Thale cress | nucleus | 37.36 | 34.17 |
| EER92100 | Sorghum | cytosol | 30.68 | 32.43 |
| OQU88608 | Sorghum | plastid | 26.1 | 32.35 |
| OQU91197 | Sorghum | plastid | 26.1 | 32.24 |
| EER90726 | Sorghum | cytosol | 24.91 | 32.04 |
| KXG20286 | Sorghum | cytosol | 27.29 | 30.38 |
| EER97198 | Sorghum | nucleus | 28.75 | 30.08 |
| KXG20965 | Sorghum | nucleus | 28.48 | 29.68 |
| KXG23356 | Sorghum | nucleus | 23.9 | 29.63 |
| OQU82149 | Sorghum | nucleus | 29.12 | 29.53 |
| OQU86696 | Sorghum | nucleus | 23.81 | 28.89 |
| EES18841 | Sorghum | nucleus | 28.94 | 28.49 |
| EES00570 | Sorghum | nucleus | 23.08 | 28.06 |
| EES18816 | Sorghum | nucleus | 22.99 | 27.61 |
| OQU86027 | Sorghum | plastid | 26.83 | 26.54 |
| EER91156 | Sorghum | nucleus | 21.79 | 25.45 |
| EER93271 | Sorghum | cytosol | 17.22 | 18.58 |
| OQU89939 | Sorghum | endoplasmic reticulum, plasma membrane | 13.37 | 14.5 |
| Os04t0615800-01 | Rice | nucleus | 0.37 | 0.76 |
Protein Annotations
| MapMan:12.5.1.15.2 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | UniProt:A0A1B6PN88 | InterPro:ArgoL1 |
| InterPro:ArgoL2 | InterPro:Argonaute_N | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | EnsemblPlants:KXG27113 | ProteinID:KXG27113 | ProteinID:KXG27113.1 | InterPro:PAZ_dom |
| InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF4 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | EnsemblPlantsGene:SORBI_3006G215000 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | UniParc:UPI00081AE4F3 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:56315381..56321716
Molecular Weight (calculated)
116546.0 Da
IEP (calculated)
9.707
GRAVY (calculated)
-0.421
Length
1092 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEHERGRGRG RGRGGRGGGG GGGGGGGGGR GGAGGYGRHG SGGDDRGGGG YGSRGGEYGG GGGYGPRGGE YGGGGYGGGS GGGGYHQGPR GGEYGGGGGG
0101: YGTRGGEYGG GGGGGVYGHD GGGYGGGSGG GGYHQGPRGG GGGGGRGGRG PGAGGGQAYA SGGGRGGNAW APAPGAGRGR GVGGGAAEYA PVRGPAPAPA
0201: ARAVAVAPRD KEAPSSSGSV ERITSSELAR VEPPASTLAA TSSVGTRVPM QRPDSGGSLS QAKVKLLVNH FIVNYREVST IFHYDISIKL DEASPKASGK
0301: ELSKAEFLSV KDELFRESSL RRLSSCVAYD GGRNLYTSAE LPAGLFRVRV RSKTYIVSVD LKKQLPLSQL SELPVPREVL QGLDVVVREA SRWRKIILGR
0401: GFYSPSSSVD IGQGAVAMKG TQQTLKYTQQ GLILCVDYSV MPFYKAGPVM DIVQKLVPHL DYRTTLNRRQ LENLIEELKG RRVTVVHRRT NQKYTVQGLT
0501: PLPAIQMTFV DAESGQTKRL VDYYAQKHDK VIEYQMLPCL DLSKSKDKPN HVPIELCTLL EGQRFPKANL DKNSDRILKG KALIPPSHRR NEIQDLVNAS
0601: DGPCRGEIAQ QFGISLDLRM TEVTGRILPP PNLKLGASNG HMSKFSMDQN CQWNLVKKRL VEGRDLQCWG IVDFSAEPSH PRQEPLNGRM FVDKIVRKCC
0701: ELGIQMNSNP CFIHISKMAV LSDPHRLKEE LNKAKQAAVS KKQRLQLLFC PMSEQHPGYK TLKLICDTQL GILTQCFLSD RANKPNGQDQ YMTNLALKIN
0801: GKLGGSNVQL FDSLPRVGGG APFMFIGADV NHPSPGNVES PSIAGVVASI NSGANKYVSR IRAQPHRCEV IQQLGEICLE LIGVFVKINR VKPQKIIYFR
0901: DGVSDGQFDM VLNEELADLE KAIKVDGYAP TITVIVAKKR HHTRLFPKDQ GQQQTKTGNV PPGTVVDTGV VDPSAYDFYL CSHTGLLGTS RPTHYYSLVD
1001: EHGFGSDDLQ KLIYNLCFVF ARCTKPVSLA TPVYYADLVA YRGRVYYEAA MMVSQRGMGS ASSASSTSSA GTVDFTNFPR LHKDVEDNMF FI
0101: YGTRGGEYGG GGGGGVYGHD GGGYGGGSGG GGYHQGPRGG GGGGGRGGRG PGAGGGQAYA SGGGRGGNAW APAPGAGRGR GVGGGAAEYA PVRGPAPAPA
0201: ARAVAVAPRD KEAPSSSGSV ERITSSELAR VEPPASTLAA TSSVGTRVPM QRPDSGGSLS QAKVKLLVNH FIVNYREVST IFHYDISIKL DEASPKASGK
0301: ELSKAEFLSV KDELFRESSL RRLSSCVAYD GGRNLYTSAE LPAGLFRVRV RSKTYIVSVD LKKQLPLSQL SELPVPREVL QGLDVVVREA SRWRKIILGR
0401: GFYSPSSSVD IGQGAVAMKG TQQTLKYTQQ GLILCVDYSV MPFYKAGPVM DIVQKLVPHL DYRTTLNRRQ LENLIEELKG RRVTVVHRRT NQKYTVQGLT
0501: PLPAIQMTFV DAESGQTKRL VDYYAQKHDK VIEYQMLPCL DLSKSKDKPN HVPIELCTLL EGQRFPKANL DKNSDRILKG KALIPPSHRR NEIQDLVNAS
0601: DGPCRGEIAQ QFGISLDLRM TEVTGRILPP PNLKLGASNG HMSKFSMDQN CQWNLVKKRL VEGRDLQCWG IVDFSAEPSH PRQEPLNGRM FVDKIVRKCC
0701: ELGIQMNSNP CFIHISKMAV LSDPHRLKEE LNKAKQAAVS KKQRLQLLFC PMSEQHPGYK TLKLICDTQL GILTQCFLSD RANKPNGQDQ YMTNLALKIN
0801: GKLGGSNVQL FDSLPRVGGG APFMFIGADV NHPSPGNVES PSIAGVVASI NSGANKYVSR IRAQPHRCEV IQQLGEICLE LIGVFVKINR VKPQKIIYFR
0901: DGVSDGQFDM VLNEELADLE KAIKVDGYAP TITVIVAKKR HHTRLFPKDQ GQQQTKTGNV PPGTVVDTGV VDPSAYDFYL CSHTGLLGTS RPTHYYSLVD
1001: EHGFGSDDLQ KLIYNLCFVF ARCTKPVSLA TPVYYADLVA YRGRVYYEAA MMVSQRGMGS ASSASSTSSA GTVDFTNFPR LHKDVEDNMF FI
0001: MDRGGYRGGR GDGRGRGGGG DRGRGYSGRG RGFVQDRDGG WVNPGQSSGG HVRGRGTQLQ QPPPQEVPPS SSQAQVSQGV APGDVGQGGV GDVGRDGVGD
0101: VGRDGVGDVG QGGVGDVGQV GVGDVGQGGV GDVGQGGVGD VGRDGVGDVG RDGVGDVGRG GVGDRGQSQS GLSSGHFGRG TQLQQPQPQA VSQSSSQGQV
0201: SQSFATGGVG LGAWARKPQL FSDSTVLPSS SSSNVVASHT ASGSQVMTPK PSSSDKKEPV KRPDKGGNIK VKGVINLSVN HFRVSFSTES VIRHYDVDIK
0301: GENSSKKISR FELAMVKEKL FKDNNDFPNA MTAYDGQKNI FSAVELPTGS FKVDFSETEE IMRGRSYTFI IKQVKELKLL DLQAYIDGRS TFIPRDVLQG
0401: MDVVMKEHPS KRMITVGKRF FSTRLEIDFG YGVGAAKGFH HTLKPTVQGL SLCLNSSLLA FRKAISVIEY LKLYFGWRNI RQFKNCRPDD VVQELIGLKV
0501: TVDHRKTKQK FIIMGLSKDD TKDIKFDFID HAGNQPPRKI SIVEYFKEKY GRDIDHKDIP CLNLGKKGRE NFVPMEFCNL VEGQIFPKEK LYRDSAAWLK
0601: ELSLVTPQQR LENINKMIKS SDGPRGGDII GNFGLRVDPN MTTVEGRVLE APTLKLTDRR GNPIHEKLMS ESNQWNLTTK GVTKGSIIKH WAVLDFTASE
0701: SLKKKMPGYF VNKLIERCKG LGMQMEAPIV CKTSSMETLY DGNALEELLR SVIDEASHNH GGACPTLVLC AMTGKHDGYK TLKWIAETKL GLVTQCFLTI
0801: SAIKGETVSD QYLANLALKI NAKVGGTNVE LVDNIFSFFK KEDKVMFIGA DVNHPAAHDN MSPSIVAVVG TLNWPEANRY AARVKAQSHR KEEIQGFGET
0901: CWELIEAHSQ APEKRPNKIV IFRDGVSDGQ FDMVLNVELQ NVKDVFAKVG YNPQITVIVA QKRHQTRFFP ATTSKDGRAK GNVPSGTVVD TTIIHPFEYD
1001: FYLCSQHGAI GTSKPTHYYV LSDEIGFNSN QIQKLIFDLC FTFTRCTKPV ALVPPVSYAD KAASRGRVYY EASLMKKNSK QSRGASSSSA SVASSSSSVT
1101: MEDKEIFKVH AGIENFMFFV
0101: VGRDGVGDVG QGGVGDVGQV GVGDVGQGGV GDVGQGGVGD VGRDGVGDVG RDGVGDVGRG GVGDRGQSQS GLSSGHFGRG TQLQQPQPQA VSQSSSQGQV
0201: SQSFATGGVG LGAWARKPQL FSDSTVLPSS SSSNVVASHT ASGSQVMTPK PSSSDKKEPV KRPDKGGNIK VKGVINLSVN HFRVSFSTES VIRHYDVDIK
0301: GENSSKKISR FELAMVKEKL FKDNNDFPNA MTAYDGQKNI FSAVELPTGS FKVDFSETEE IMRGRSYTFI IKQVKELKLL DLQAYIDGRS TFIPRDVLQG
0401: MDVVMKEHPS KRMITVGKRF FSTRLEIDFG YGVGAAKGFH HTLKPTVQGL SLCLNSSLLA FRKAISVIEY LKLYFGWRNI RQFKNCRPDD VVQELIGLKV
0501: TVDHRKTKQK FIIMGLSKDD TKDIKFDFID HAGNQPPRKI SIVEYFKEKY GRDIDHKDIP CLNLGKKGRE NFVPMEFCNL VEGQIFPKEK LYRDSAAWLK
0601: ELSLVTPQQR LENINKMIKS SDGPRGGDII GNFGLRVDPN MTTVEGRVLE APTLKLTDRR GNPIHEKLMS ESNQWNLTTK GVTKGSIIKH WAVLDFTASE
0701: SLKKKMPGYF VNKLIERCKG LGMQMEAPIV CKTSSMETLY DGNALEELLR SVIDEASHNH GGACPTLVLC AMTGKHDGYK TLKWIAETKL GLVTQCFLTI
0801: SAIKGETVSD QYLANLALKI NAKVGGTNVE LVDNIFSFFK KEDKVMFIGA DVNHPAAHDN MSPSIVAVVG TLNWPEANRY AARVKAQSHR KEEIQGFGET
0901: CWELIEAHSQ APEKRPNKIV IFRDGVSDGQ FDMVLNVELQ NVKDVFAKVG YNPQITVIVA QKRHQTRFFP ATTSKDGRAK GNVPSGTVVD TTIIHPFEYD
1001: FYLCSQHGAI GTSKPTHYYV LSDEIGFNSN QIQKLIFDLC FTFTRCTKPV ALVPPVSYAD KAASRGRVYY EASLMKKNSK QSRGASSSSA SVASSSSSVT
1101: MEDKEIFKVH AGIENFMFFV
Arabidopsis Description
AGO3Protein argonaute 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.