Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 90.93 | 88.05 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 64.98 | 61.97 |
| PGSC0003DMT400054667 | Potato | cytosol | 42.09 | 54.66 |
| KRH36727 | Soybean | nucleus | 25.95 | 54.3 |
| KRG89432 | Soybean | nucleus | 54.22 | 53.21 |
| CDY70429 | Canola | plastid | 46.1 | 49.27 |
| KRH11732 | Soybean | nucleus | 53.48 | 48.89 |
| Solyc02g069260.2.1 | Tomato | nucleus | 52.53 | 47.79 |
| Solyc02g069270.2.1 | Tomato | cytosol | 49.05 | 47.59 |
| PGSC0003DMT400054669 | Potato | cytosol | 52.32 | 47.19 |
| AT1G31280.1 | Thale cress | nucleus | 48.52 | 45.36 |
| CDY02373 | Canola | nucleus | 48.42 | 44.87 |
| CDY25885 | Canola | cytosol | 47.78 | 44.85 |
| Bra040815.1-P | Field mustard | cytosol | 47.68 | 44.8 |
| Bra023172.1-P | Field mustard | nucleus | 48.84 | 44.65 |
| Zm00001d002316_P003 | Maize | plastid | 40.3 | 44.63 |
| Zm00001d026300_P001 | Maize | nucleus | 40.93 | 44.04 |
| CDY55876 | Canola | cytosol | 48.0 | 43.96 |
| Solyc02g069280.2.1 | Tomato | nucleus | 45.04 | 42.74 |
| PGSC0003DMT400054661 | Potato | nucleus | 43.04 | 41.63 |
| Os04t0615700-01 | Rice | nucleus, plasma membrane | 42.72 | 39.17 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 29.01 | 39.01 |
| AT1G31290.1 | Thale cress | nucleus | 48.52 | 38.53 |
| KXG27113 | Sorghum | nucleus | 43.57 | 37.82 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 31.65 | 37.36 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 40.93 | 37.09 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 41.03 | 37.08 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 40.93 | 37.06 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 40.82 | 36.93 |
| VIT_03s0038g00830.t01 | Wine grape | nucleus | 36.92 | 34.97 |
| VIT_01s0113g00500.t01 | Wine grape | nucleus | 36.6 | 34.6 |
| VIT_11s0016g04620.t01 | Wine grape | cytosol | 31.75 | 33.26 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 29.54 | 32.9 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 26.69 | 32.56 |
| VIT_05s0020g04190.t01 | Wine grape | nucleus | 29.43 | 31.78 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 33.97 | 31.6 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 34.81 | 31.22 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 34.92 | 30.96 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 34.6 | 30.8 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 33.44 | 30.72 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 33.54 | 29.31 |
| VIT_12s0059g01430.t01 | Wine grape | nucleus | 28.06 | 28.91 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 26.79 | 27.82 |
| VIT_13s0175g00140.t01 | Wine grape | nucleus | 25.53 | 27.34 |
| VIT_08s0040g00070.t01 | Wine grape | nucleus | 25.84 | 26.69 |
| Os04t0615800-01 | Rice | nucleus | 0.32 | 0.57 |
Protein Annotations
| EntrezGene:100251084 | wikigene:100251084 | MapMan:12.5.1.15.2 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 |
| EMBL:AM450241 | InterPro:ArgoL1 | InterPro:ArgoL2 | InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | ProteinID:CAN61100 |
| ProteinID:CAN61100.1 | ProteinID:CCB52132 | ProteinID:CCB52132.1 | UniProt:F6HIT6 | EMBL:FN595766 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0031047 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | EntrezGene:LOC100251084 | wikigene:LOC100251084 |
| InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 |
| PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF4 |
| InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 |
| SUPFAM:SSF53098 | UniParc:UPI0001985BE4 | ArrayExpress:VIT_10s0042g01180 | EnsemblPlantsGene:VIT_10s0042g01180 | EnsemblPlants:VIT_10s0042g01180.t01 | RefSeq:XP_002274149 |
| RefSeq:XP_002274149.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:15146895..15151231
Molecular Weight (calculated)
105915.0 Da
IEP (calculated)
9.552
GRAVY (calculated)
-0.352
Length
948 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRGGRGRG RGGGGVGGGY GWRGRGRGRG RGRGQPTQPW RPSNPVQQPS SNLVGQPVQR CIPNPVQQPQ HPPIAPATDA TVELPTSSHH VKEAGDKRIP
101: MRRPDKGGTN AVRSVPLRVN HFPVKFKSDG LNMHYDVDIK PEAPPKKGRA VKISKSTSYM IREKLCVDHP SQFPASEIAY DGEKNIFSAV ELPTGKFKVE
201: ISGGEEMKVC SFIVTINLVK QLELQKLSDY LSGVLSFVPR DILQGMDVVM KENPARHMIS SGRSFYQFKD SGKDELGYGI IASRGFQHSL KPTAQGLSLC
301: LDYSVVPFFN PISVLEFLKE HVCDFSLREF KRYRSEVEAA LKGYKVRVTH RNTGQKFIVA GLTSEDTRNL SFLPEDPEGN VLPKKVMLVD YFYEKYGKDI
401: ENQDIPCLDV GKNNRKNYVP MEFCILVEGQ RYTKEILDKE AAKRLKHVQL PTPVVRESKI CEMMQANDGP CGGGIIDSFG IGVSKNMTEV AGRVIEPPEL
501: KLGGKLNKIT VERDRCQWNL VGKMVVKGIP VDHWAVVDFS GQEQYNRQNT NQFISRFIRR CEKLGIQTKN PLFCETASMH AFRVFPVLRE LLDKVYKKAR
601: CQLQILVCVM ARKDAGYGYL KWFAETKLGM VTQCCLSRPA NKVSDHHLAN LALKLNAKLG GSNVELIKRL PRFEGEGHVM FIGADVNHPG SQNTTSPSIA
701: AVVATVNWPA ANRYAARIRP QAHRMEKIQN FGAMCLELVE TYVQANKVKP EKIVVFRDGV SEGQFDMVLN EELLDLKRAI QGENYCPTIT LIVARKRHLT
801: RLFPKVNDGS FNGNVPPGTV VDTTVVHLSE FDFYLCSHYG TLGTSKPTHY HVLYDEHRFS SDQIQKLTYN LCFTFARCTK PVSLVPPVYY ADLAAYRGRL
901: YYDAIVAEAG ASAATSSSVA SSSSSSGAWL NERLYRLHGA LENMMFFI
101: MRRPDKGGTN AVRSVPLRVN HFPVKFKSDG LNMHYDVDIK PEAPPKKGRA VKISKSTSYM IREKLCVDHP SQFPASEIAY DGEKNIFSAV ELPTGKFKVE
201: ISGGEEMKVC SFIVTINLVK QLELQKLSDY LSGVLSFVPR DILQGMDVVM KENPARHMIS SGRSFYQFKD SGKDELGYGI IASRGFQHSL KPTAQGLSLC
301: LDYSVVPFFN PISVLEFLKE HVCDFSLREF KRYRSEVEAA LKGYKVRVTH RNTGQKFIVA GLTSEDTRNL SFLPEDPEGN VLPKKVMLVD YFYEKYGKDI
401: ENQDIPCLDV GKNNRKNYVP MEFCILVEGQ RYTKEILDKE AAKRLKHVQL PTPVVRESKI CEMMQANDGP CGGGIIDSFG IGVSKNMTEV AGRVIEPPEL
501: KLGGKLNKIT VERDRCQWNL VGKMVVKGIP VDHWAVVDFS GQEQYNRQNT NQFISRFIRR CEKLGIQTKN PLFCETASMH AFRVFPVLRE LLDKVYKKAR
601: CQLQILVCVM ARKDAGYGYL KWFAETKLGM VTQCCLSRPA NKVSDHHLAN LALKLNAKLG GSNVELIKRL PRFEGEGHVM FIGADVNHPG SQNTTSPSIA
701: AVVATVNWPA ANRYAARIRP QAHRMEKIQN FGAMCLELVE TYVQANKVKP EKIVVFRDGV SEGQFDMVLN EELLDLKRAI QGENYCPTIT LIVARKRHLT
801: RLFPKVNDGS FNGNVPPGTV VDTTVVHLSE FDFYLCSHYG TLGTSKPTHY HVLYDEHRFS SDQIQKLTYN LCFTFARCTK PVSLVPPVYY ADLAAYRGRL
901: YYDAIVAEAG ASAATSSSVA SSSSSSGAWL NERLYRLHGA LENMMFFI
0001: MERGGYRGGR GDGRGRGGRG YGGGGGGGEQ GRDRGYGGGE QGRGRGSERG GGNRGQGRGE QQDFRSQSQR GPPPGHGGRG TTQFQQPRPQ VAPQPSQAPA
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV
Arabidopsis Description
AGO2Protein argonaute 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.