Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
nucleus: 28394025 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054669 | Potato | cytosol | 93.57 | 92.77 |
| Solyc02g069270.2.1 | Tomato | cytosol | 74.95 | 79.94 |
| Solyc02g069280.2.1 | Tomato | nucleus | 58.25 | 60.76 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 47.79 | 52.53 |
| KRG89432 | Soybean | nucleus | 47.6 | 51.35 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 48.18 | 51.28 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 48.66 | 51.01 |
| KRH36727 | Soybean | nucleus | 22.17 | 50.99 |
| CDY70429 | Canola | plastid | 41.84 | 49.15 |
| KRH11732 | Soybean | nucleus | 46.83 | 47.06 |
| AT1G31280.1 | Thale cress | nucleus | 45.68 | 46.94 |
| CDY02373 | Canola | nucleus | 45.3 | 46.14 |
| Bra023172.1-P | Field mustard | nucleus | 45.49 | 45.71 |
| Bra040815.1-P | Field mustard | cytosol | 43.95 | 45.39 |
| CDY25885 | Canola | cytosol | 43.76 | 45.15 |
| CDY55876 | Canola | cytosol | 44.82 | 45.12 |
| Zm00001d002316_P003 | Maize | plastid | 35.99 | 43.81 |
| Zm00001d026300_P001 | Maize | nucleus | 35.89 | 42.45 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 26.58 | 39.29 |
| Os04t0615700-01 | Rice | nucleus, plasma membrane | 38.48 | 38.78 |
| AT1G31290.1 | Thale cress | nucleus | 43.95 | 38.36 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 38.1 | 37.95 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 38.0 | 37.79 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 38.0 | 37.75 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 37.91 | 37.73 |
| KXG27113 | Sorghum | nucleus | 38.96 | 37.18 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 28.41 | 36.86 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 34.84 | 33.96 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 34.17 | 33.68 |
| Solyc01g010970.2.1 | Tomato | nucleus | 31.67 | 33.0 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 33.69 | 32.96 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 31.57 | 32.29 |
| Solyc12g006790.1.1 | Tomato | nucleus | 28.6 | 31.94 |
| Solyc09g082830.2.1 | Tomato | nucleus | 29.85 | 31.67 |
| Solyc03g098280.2.1 | Tomato | nucleus | 29.65 | 31.53 |
| Solyc06g072300.2.1 | Tomato | nucleus | 31.67 | 31.31 |
| Solyc07g049500.2.1 | Tomato | nucleus | 25.53 | 29.46 |
| Solyc01g096750.1.1 | Tomato | nucleus | 24.86 | 29.4 |
| Solyc06g073540.2.1 | Tomato | nucleus | 25.62 | 29.24 |
| Solyc01g008960.2.1 | Tomato | nucleus | 25.24 | 28.93 |
| Solyc06g074730.2.1 | Tomato | nucleus | 27.83 | 28.68 |
| Solyc06g073530.1.1 | Tomato | nucleus | 24.76 | 28.54 |
| Solyc03g111760.2.1 | Tomato | mitochondrion | 21.59 | 24.56 |
| Os04t0615800-01 | Rice | nucleus | 0.29 | 0.57 |
Protein Annotations
| MapMan:12.5.1.15.2 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 |
| EMBL:JX493012 | UniProt:K4B7Q8 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 |
| PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16488 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 |
| PANTHER:PTHR22891:SF4 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 |
| SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:Solyc02g069260.2 | EnsemblPlants:Solyc02g069260.2.1 | UniParc:UPI0002767EE9 |
| SEG:seg | : | : | : | : | : |
Description
AGO2A2 [Source:UniProtKB/TrEMBL;Acc:K4B7Q8]
Coordinates
chr2:+:39204297..39211055
Molecular Weight (calculated)
116007.0 Da
IEP (calculated)
9.714
GRAVY (calculated)
-0.523
Length
1042 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDRGNYRRGG GHDNAGRGGG NRGRGQGRGG GRGEPQIGGG RGGTHIGGGS QMGQPPQQWG NQPRGSGQYQ IRGGAPQNQP GQNYPVNQNP GRGGTWVNQP
0101: VQRGGGGGGS AWPRPQQQGS GVPNTTWPRP PPQQQGSGSG VANAWARPPP QRSQQHGGGN QQQVVDRSPP QSSDPVQVDL GSLKITDQSP SSRQESSKEK
0201: RVPIARPDTG KIAVKSIALL ANHFPVRFNP QSTIMHYDVD IQQRADGNRP VKKLTNKSVL HMIREKLCAD DPTRFPLDKT AYDGKKNIFS AVQLPTGCFA
0301: VNWSDGEDAR LRSYDITIKL VAELKLCKLK EYLSGSLSHI PRDILQGMEL VMKENPTRCR TSVGRCFYSN EHLPDHDFRF GVAAYRGFQQ SLKPTKGGLA
0401: LCLDYSVLAL RKPMPVLDFL KEYLGESNEN TFRNNIRAAK GALVGLKVRV IHRRTSQKFL IKQLTDCKTR EITFPLEDPE GINPPRDVLL VDYFRDKYQR
0501: EIQFKDFPSL DIGKGNKKNY VPMEFCVLVE GQRYPKEDLD KDTALFLKNI SLARPQDRRQ AICEMVRAGD GPCGAVTRNF DIGVDRNMTR VPGRILPPPD
0601: LKLGGQNRLP VNDKCQWNLV GKSVVEGKAL QRWALIDFSA QDRKPFFRLR VDEFVFRLKD RCRKLSINME EPAVVHFTDM HVLSEVGKVH KLLDGVVNAA
0701: KREINGKLQM IVCVMTSKHN GYKYLKWVSE TQIGVVTQCC LSTNANKGQD QYLANLCMKI NAKLGGSNME LMDRLPNFGR EDNVMFIGAD VNHPAAKNVT
0801: CPSIAAVVAT VNWPAANRYA ARVCPQVHRT EKILEFGKMC ADLVHTYKEI NSVKPNKIVV FRDGVSEGQF DMVLNEELLD LAKAIYDSNY QPAITLVVAQ
0901: KRHHTRLFPE GGPANVPPGT VVDTIIVHPS DFDFYLCSHF GGLGTSKPTH YHVLWDDNGF NSDSLQKLIY NMCFTFARCT KPVSLVPPVY YADLVAYRGR
1001: MFQEVLMEMN SPSSATSSSP TASFQQKFYD LHSDLQNVMF FV
0101: VQRGGGGGGS AWPRPQQQGS GVPNTTWPRP PPQQQGSGSG VANAWARPPP QRSQQHGGGN QQQVVDRSPP QSSDPVQVDL GSLKITDQSP SSRQESSKEK
0201: RVPIARPDTG KIAVKSIALL ANHFPVRFNP QSTIMHYDVD IQQRADGNRP VKKLTNKSVL HMIREKLCAD DPTRFPLDKT AYDGKKNIFS AVQLPTGCFA
0301: VNWSDGEDAR LRSYDITIKL VAELKLCKLK EYLSGSLSHI PRDILQGMEL VMKENPTRCR TSVGRCFYSN EHLPDHDFRF GVAAYRGFQQ SLKPTKGGLA
0401: LCLDYSVLAL RKPMPVLDFL KEYLGESNEN TFRNNIRAAK GALVGLKVRV IHRRTSQKFL IKQLTDCKTR EITFPLEDPE GINPPRDVLL VDYFRDKYQR
0501: EIQFKDFPSL DIGKGNKKNY VPMEFCVLVE GQRYPKEDLD KDTALFLKNI SLARPQDRRQ AICEMVRAGD GPCGAVTRNF DIGVDRNMTR VPGRILPPPD
0601: LKLGGQNRLP VNDKCQWNLV GKSVVEGKAL QRWALIDFSA QDRKPFFRLR VDEFVFRLKD RCRKLSINME EPAVVHFTDM HVLSEVGKVH KLLDGVVNAA
0701: KREINGKLQM IVCVMTSKHN GYKYLKWVSE TQIGVVTQCC LSTNANKGQD QYLANLCMKI NAKLGGSNME LMDRLPNFGR EDNVMFIGAD VNHPAAKNVT
0801: CPSIAAVVAT VNWPAANRYA ARVCPQVHRT EKILEFGKMC ADLVHTYKEI NSVKPNKIVV FRDGVSEGQF DMVLNEELLD LAKAIYDSNY QPAITLVVAQ
0901: KRHHTRLFPE GGPANVPPGT VVDTIIVHPS DFDFYLCSHF GGLGTSKPTH YHVLWDDNGF NSDSLQKLIY NMCFTFARCT KPVSLVPPVY YADLVAYRGR
1001: MFQEVLMEMN SPSSATSSSP TASFQQKFYD LHSDLQNVMF FV
0001: MDRGGYRGGR GDGRGRGGGG DRGRGYSGRG DGRGRGGGGD RGRGYSGRGD GHGRGGGGDR GRGYSGRGRG FVQDRDGGWV NPGQSSGGHV RGRGTQLQQP
0101: PPQEVPPSSS QAQVSQGVAP GDVGQGGVGD VGRDGVGDVG RDGVGDVGQG GVGDVGQVGV GDVGQGGVGD VGQGGVGDVG RDGVGDVGRD GVGDVGRGGV
0201: GDRGQSQSGL SSGHFGRGTQ LQQPQPQAVS QSSSQGQVSQ SFATGGVGLG AWARKPQLFS DSTVLPSSSS SNVVASHTAS GSQVMTPKPS SSDKKEPVKR
0301: PDKGGNIKVK GVINLSVNHF RVSFSTESVI RHYDVDIKGE NSSKKISRFE LAMVKEKLFK DNNDFPNAMT AYDGQKNIFS AVELPTGSFK VDFSETEEIM
0401: RGRSYTFIIK QVKELKLLDL QAYIDGRSTF IPRDVLQGMD VVMKEHPSKR MITVGKRFFS TRLEIDFGYG VGAAKGFHHT LKPTVQGLSL CLNSSLLAFR
0501: KAISVIEYLK LYFGWRNIRQ FKNCRPDDVV QELIGLKVTV DHRKTKQKFI IMGLSKDDTK DIKFDFIDHA GNQPPRKISI VEYFKEKYGR DIDHKDIPCL
0601: NLGKKGRENF VPMEFCNLVE GQIFPKEKLY RDSAAWLKEL SLVTPQQRLE NINKMIKSSD GPRGGDIIGN FGLRVDPNMT TVEGRVLEAP TLKLTDRRGN
0701: PIHEKLMSES NQWNLTTKGV TKGSIIKHWA VLDFTASESL KKKMPGYFVN KLIERCKGLG MQMEAPIVCK TSSMETLYDG NALEELLRSV IDEASHNHGG
0801: ACPTLVLCAM TGKHDGYKTL KWIAETKLGL VTQCFLTISA IKGETVSDQY LANLALKINA KVGGTNVELV DNIFSFFKKE DKVMFIGADV NHPAAHDNMS
0901: PSIVAVVGTL NWPEANRYAA RVKAQSHRKE EIQGFGETCW ELIEAHSQAP EKRPNKIVIF RDGVSDGQFD MVLNVELQNV KDVFAKVGYN PQITVIVAQK
1001: RHQTRFFPAT TSKDGRAKGN VPSGTVVDTT IIHPFEYDFY LCSQHGAIGT SKPTHYYVLS DEIGFNSNQI QKLIFDLCFT FTRCTKPVAL VPPVSYADKA
1101: ASRGRVYYEA SLMKKNSKQS RGASSSSASV ASSSSSVTME DKEIFKVHAG IENFMFFV
0101: PPQEVPPSSS QAQVSQGVAP GDVGQGGVGD VGRDGVGDVG RDGVGDVGQG GVGDVGQVGV GDVGQGGVGD VGQGGVGDVG RDGVGDVGRD GVGDVGRGGV
0201: GDRGQSQSGL SSGHFGRGTQ LQQPQPQAVS QSSSQGQVSQ SFATGGVGLG AWARKPQLFS DSTVLPSSSS SNVVASHTAS GSQVMTPKPS SSDKKEPVKR
0301: PDKGGNIKVK GVINLSVNHF RVSFSTESVI RHYDVDIKGE NSSKKISRFE LAMVKEKLFK DNNDFPNAMT AYDGQKNIFS AVELPTGSFK VDFSETEEIM
0401: RGRSYTFIIK QVKELKLLDL QAYIDGRSTF IPRDVLQGMD VVMKEHPSKR MITVGKRFFS TRLEIDFGYG VGAAKGFHHT LKPTVQGLSL CLNSSLLAFR
0501: KAISVIEYLK LYFGWRNIRQ FKNCRPDDVV QELIGLKVTV DHRKTKQKFI IMGLSKDDTK DIKFDFIDHA GNQPPRKISI VEYFKEKYGR DIDHKDIPCL
0601: NLGKKGRENF VPMEFCNLVE GQIFPKEKLY RDSAAWLKEL SLVTPQQRLE NINKMIKSSD GPRGGDIIGN FGLRVDPNMT TVEGRVLEAP TLKLTDRRGN
0701: PIHEKLMSES NQWNLTTKGV TKGSIIKHWA VLDFTASESL KKKMPGYFVN KLIERCKGLG MQMEAPIVCK TSSMETLYDG NALEELLRSV IDEASHNHGG
0801: ACPTLVLCAM TGKHDGYKTL KWIAETKLGL VTQCFLTISA IKGETVSDQY LANLALKINA KVGGTNVELV DNIFSFFKKE DKVMFIGADV NHPAAHDNMS
0901: PSIVAVVGTL NWPEANRYAA RVKAQSHRKE EIQGFGETCW ELIEAHSQAP EKRPNKIVIF RDGVSDGQFD MVLNVELQNV KDVFAKVGYN PQITVIVAQK
1001: RHQTRFFPAT TSKDGRAKGN VPSGTVVDTT IIHPFEYDFY LCSQHGAIGT SKPTHYYVLS DEIGFNSNQI QKLIFDLCFT FTRCTKPVAL VPPVSYADKA
1101: ASRGRVYYEA SLMKKNSKQS RGASSSSASV ASSSSSVTME DKEIFKVHAG IENFMFFV
Arabidopsis Description
AGO3Protein argonaute 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.