Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 88.05 | 90.93 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 63.94 | 62.98 |
| KRH36727 | Soybean | nucleus | 26.05 | 56.29 |
| PGSC0003DMT400054667 | Potato | cytosol | 41.16 | 55.21 |
| KRG89432 | Soybean | nucleus | 52.71 | 53.42 |
| KRH11732 | Soybean | nucleus | 53.01 | 50.05 |
| CDY70429 | Canola | plastid | 44.94 | 49.61 |
| Solyc02g069270.2.1 | Tomato | cytosol | 48.21 | 48.31 |
| Solyc02g069260.2.1 | Tomato | nucleus | 51.28 | 48.18 |
| PGSC0003DMT400054669 | Potato | cytosol | 50.97 | 47.48 |
| AT1G31280.1 | Thale cress | nucleus | 47.7 | 46.06 |
| CDY25885 | Canola | cytosol | 47.09 | 45.64 |
| Bra040815.1-P | Field mustard | cytosol | 46.99 | 45.59 |
| Zm00001d002316_P003 | Maize | plastid | 39.63 | 45.33 |
| CDY02373 | Canola | nucleus | 47.19 | 45.16 |
| Bra023172.1-P | Field mustard | nucleus | 47.6 | 44.94 |
| CDY55876 | Canola | cytosol | 47.29 | 44.73 |
| Zm00001d026300_P001 | Maize | nucleus | 40.25 | 44.72 |
| Solyc02g069280.2.1 | Tomato | nucleus | 44.43 | 43.54 |
| PGSC0003DMT400054661 | Potato | nucleus | 42.7 | 42.65 |
| TraesCS2A01G419800.2 | Wheat | nucleus | 28.8 | 40.0 |
| Os04t0615700-01 | Rice | nucleus, plasma membrane | 41.27 | 39.07 |
| AT1G31290.1 | Thale cress | nucleus | 47.5 | 38.94 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 31.36 | 38.23 |
| KXG27113 | Sorghum | nucleus | 42.39 | 38.0 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 40.14 | 37.57 |
| TraesCS2A01G419900.1 | Wheat | nucleus | 40.25 | 37.56 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 40.04 | 37.4 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 39.94 | 37.34 |
| VIT_03s0038g00830.t01 | Wine grape | nucleus | 35.34 | 34.57 |
| VIT_01s0113g00500.t01 | Wine grape | nucleus | 35.14 | 34.3 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 28.91 | 33.26 |
| VIT_11s0016g04620.t01 | Wine grape | cytosol | 30.54 | 33.04 |
| HORVU2Hr1G098620.2 | Barley | nucleus | 33.71 | 32.38 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 25.64 | 32.3 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 34.22 | 31.69 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 34.42 | 31.52 |
| VIT_05s0020g04190.t01 | Wine grape | nucleus | 28.09 | 31.32 |
| TraesCS2A01G419500.1 | Wheat | nucleus | 34.01 | 31.27 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 32.79 | 31.1 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 32.48 | 29.31 |
| VIT_12s0059g01430.t01 | Wine grape | nucleus | 27.37 | 29.13 |
| VIT_06s0009g01200.t01 | Wine grape | nucleus | 26.25 | 28.15 |
| VIT_13s0175g00140.t01 | Wine grape | nucleus | 25.03 | 27.68 |
| VIT_08s0040g00070.t01 | Wine grape | nucleus | 25.54 | 27.23 |
| Os04t0615800-01 | Rice | nucleus | 0.31 | 0.57 |
Protein Annotations
| EntrezGene:100249360 | wikigene:100249360 | MapMan:12.5.1.15.2 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 |
| EMBL:AM489349 | InterPro:ArgoL1 | InterPro:Argonaute_N | ProteinID:CAN62291 | ProteinID:CAN62291.1 | ProteinID:CCB52130 |
| ProteinID:CCB52130.1 | UniProt:F6HIT4 | EMBL:FN595766 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0031047 | InterPro:IPR003100 |
| InterPro:IPR003165 | InterPro:IPR036397 | EntrezGene:LOC100249360 | wikigene:LOC100249360 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFscan:PS50821 | PFscan:PS50822 |
| PANTHER:PTHR22891 | PANTHER:PTHR22891:SF4 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 |
| SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | UniParc:UPI00021087DF | ArrayExpress:VIT_10s0042g01150 |
| EnsemblPlantsGene:VIT_10s0042g01150 | EnsemblPlants:VIT_10s0042g01150.t01 | RefSeq:XP_003633060 | RefSeq:XP_003633060.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr10:+:15100682..15105025
Molecular Weight (calculated)
108968.0 Da
IEP (calculated)
9.768
GRAVY (calculated)
-0.321
Length
979 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGRGGRGRG RGRGDGGGGG SGWRGRGRGR GWGQPTQPWR PSNPVQQPSS NPVGQPVQRW VPNPVQQPQP PTIAPATAAP VGQPVQLWVP NPVQQPQRPT
101: FVPATAATVE LPTSSHHDKE AGDKRIPMRR PDKGGTNAVR SVSLRVNHFP VKFKSNRLIM HYDVDIKPEA PPKGRAVKIS KATLYMIREK LCVDHPSQFP
201: TSKIAYDGEK NIFSAVELPT GKFKVEISGG EEMKVCSFIV TINLVKQLEL QKLSDYLSGV LSFVPRDILQ GMDVVMKENP ARHMISSGRS FYQFKDSGKD
301: ELGYGIIASR GFQHSLKPTA QGLSLCLDYS VVPFFNPISV LEFLKEHVRG FSLREFKRYR SKVEATLKGL KVRVTHRNTG QKFIIAGLTS QDTQNLSFLA
401: EDPERKVLSK KVMLVDYFYE KYGKDIVHKD IPCLDVGKNN RNNYVPMEFC TLVEGQRYTK EILDKDAAQG LKREQLPTPV VRESKICAMV QANDGPCGGG
501: IIDSFGIDVN KNMTALAGRV IGPPELKLGD PSEGKVNKLT VDKDKCQWNL VGKLVVKGIP VDHWAVVDFT AYEQYNRLNT GQFISGFIRR CGKLGIQMRN
601: PLFCETANMY AFREFPVLQE LLDKVYKKAR CQLQILVCVM ARRDAGYGYL KWFSETRLGM VTQCCLSSPA NKASDQYLAN LALKLNAKLG GSNVELIERL
701: PRFEGEGHVM FIGADVNHPG SQNTTSPSIA AVVATVNWPA ANRYAARIRP QAHRMEKIQN FGAMCLELVE AYVQANKVKP EKIVVFRDGV SEGQFDMVLN
801: EELLDLKRAI QGGNYCPTIT LIVARKRHLT RLFPKVNDRS FNGNVPPGTV VDTTVVHLSE FDFYLCSHYG TLGTSKPTHY HVLHDEHRFS SDQIQKLIYN
901: LCFTFARCTK PVSLVPPVYY ADLAAYRGRL YYDAIVAEVG ASAATSSSVA SPSSSSAGAW LNDRLYRLHG ALENMMFFI
101: FVPATAATVE LPTSSHHDKE AGDKRIPMRR PDKGGTNAVR SVSLRVNHFP VKFKSNRLIM HYDVDIKPEA PPKGRAVKIS KATLYMIREK LCVDHPSQFP
201: TSKIAYDGEK NIFSAVELPT GKFKVEISGG EEMKVCSFIV TINLVKQLEL QKLSDYLSGV LSFVPRDILQ GMDVVMKENP ARHMISSGRS FYQFKDSGKD
301: ELGYGIIASR GFQHSLKPTA QGLSLCLDYS VVPFFNPISV LEFLKEHVRG FSLREFKRYR SKVEATLKGL KVRVTHRNTG QKFIIAGLTS QDTQNLSFLA
401: EDPERKVLSK KVMLVDYFYE KYGKDIVHKD IPCLDVGKNN RNNYVPMEFC TLVEGQRYTK EILDKDAAQG LKREQLPTPV VRESKICAMV QANDGPCGGG
501: IIDSFGIDVN KNMTALAGRV IGPPELKLGD PSEGKVNKLT VDKDKCQWNL VGKLVVKGIP VDHWAVVDFT AYEQYNRLNT GQFISGFIRR CGKLGIQMRN
601: PLFCETANMY AFREFPVLQE LLDKVYKKAR CQLQILVCVM ARRDAGYGYL KWFSETRLGM VTQCCLSSPA NKASDQYLAN LALKLNAKLG GSNVELIERL
701: PRFEGEGHVM FIGADVNHPG SQNTTSPSIA AVVATVNWPA ANRYAARIRP QAHRMEKIQN FGAMCLELVE AYVQANKVKP EKIVVFRDGV SEGQFDMVLN
801: EELLDLKRAI QGGNYCPTIT LIVARKRHLT RLFPKVNDRS FNGNVPPGTV VDTTVVHLSE FDFYLCSHYG TLGTSKPTHY HVLHDEHRFS SDQIQKLIYN
901: LCFTFARCTK PVSLVPPVYY ADLAAYRGRL YYDAIVAEVG ASAATSSSVA SPSSSSAGAW LNDRLYRLHG ALENMMFFI
0001: MDRGGYRGGR GDGRGRGGGG DRGRGYSGRG RGFVQDRDGG WVNPGQSSGG HVRGRGTQLQ QPPPQEVPPS SSQAQVSQGV APGDVGQGGV GDVGRDGVGD
0101: VGRDGVGDVG QGGVGDVGQV GVGDVGQGGV GDVGQGGVGD VGRDGVGDVG RDGVGDVGRG GVGDRGQSQS GLSSGHFGRG TQLQQPQPQA VSQSSSQGQV
0201: SQSFATGGVG LGAWARKPQL FSDSTVLPSS SSSNVVASHT ASGSQVMTPK PSSSDKKEPV KRPDKGGNIK VKGVINLSVN HFRVSFSTES VIRHYDVDIK
0301: GENSSKKISR FELAMVKEKL FKDNNDFPNA MTAYDGQKNI FSAVELPTGS FKVDFSETEE IMRGRSYTFI IKQVKELKLL DLQAYIDGRS TFIPRDVLQG
0401: MDVVMKEHPS KRMITVGKRF FSTRLEIDFG YGVGAAKGFH HTLKPTVQGL SLCLNSSLLA FRKAISVIEY LKLYFGWRNI RQFKNCRPDD VVQELIGLKV
0501: TVDHRKTKQK FIIMGLSKDD TKDIKFDFID HAGNQPPRKI SIVEYFKEKY GRDIDHKDIP CLNLGKKGRE NFVPMEFCNL VEGQIFPKEK LYRDSAAWLK
0601: ELSLVTPQQR LENINKMIKS SDGPRGGDII GNFGLRVDPN MTTVEGRVLE APTLKLTDRR GNPIHEKLMS ESNQWNLTTK GVTKGSIIKH WAVLDFTASE
0701: SLKKKMPGYF VNKLIERCKG LGMQMEAPIV CKTSSMETLY DGNALEELLR SVIDEASHNH GGACPTLVLC AMTGKHDGYK TLKWIAETKL GLVTQCFLTI
0801: SAIKGETVSD QYLANLALKI NAKVGGTNVE LVDNIFSFFK KEDKVMFIGA DVNHPAAHDN MSPSIVAVVG TLNWPEANRY AARVKAQSHR KEEIQGFGET
0901: CWELIEAHSQ APEKRPNKIV IFRDGVSDGQ FDMVLNVELQ NVKDVFAKVG YNPQITVIVA QKRHQTRFFP ATTSKDGRAK GNVPSGTVVD TTIIHPFEYD
1001: FYLCSQHGAI GTSKPTHYYV LSDEIGFNSN QIQKLIFDLC FTFTRCTKPV ALVPPVSYAD KAASRGRVYY EASLMKKNSK QSRGASSSSA SVASSSSSVT
1101: MEDKEIFKVH AGIENFMFFV
0101: VGRDGVGDVG QGGVGDVGQV GVGDVGQGGV GDVGQGGVGD VGRDGVGDVG RDGVGDVGRG GVGDRGQSQS GLSSGHFGRG TQLQQPQPQA VSQSSSQGQV
0201: SQSFATGGVG LGAWARKPQL FSDSTVLPSS SSSNVVASHT ASGSQVMTPK PSSSDKKEPV KRPDKGGNIK VKGVINLSVN HFRVSFSTES VIRHYDVDIK
0301: GENSSKKISR FELAMVKEKL FKDNNDFPNA MTAYDGQKNI FSAVELPTGS FKVDFSETEE IMRGRSYTFI IKQVKELKLL DLQAYIDGRS TFIPRDVLQG
0401: MDVVMKEHPS KRMITVGKRF FSTRLEIDFG YGVGAAKGFH HTLKPTVQGL SLCLNSSLLA FRKAISVIEY LKLYFGWRNI RQFKNCRPDD VVQELIGLKV
0501: TVDHRKTKQK FIIMGLSKDD TKDIKFDFID HAGNQPPRKI SIVEYFKEKY GRDIDHKDIP CLNLGKKGRE NFVPMEFCNL VEGQIFPKEK LYRDSAAWLK
0601: ELSLVTPQQR LENINKMIKS SDGPRGGDII GNFGLRVDPN MTTVEGRVLE APTLKLTDRR GNPIHEKLMS ESNQWNLTTK GVTKGSIIKH WAVLDFTASE
0701: SLKKKMPGYF VNKLIERCKG LGMQMEAPIV CKTSSMETLY DGNALEELLR SVIDEASHNH GGACPTLVLC AMTGKHDGYK TLKWIAETKL GLVTQCFLTI
0801: SAIKGETVSD QYLANLALKI NAKVGGTNVE LVDNIFSFFK KEDKVMFIGA DVNHPAAHDN MSPSIVAVVG TLNWPEANRY AARVKAQSHR KEEIQGFGET
0901: CWELIEAHSQ APEKRPNKIV IFRDGVSDGQ FDMVLNVELQ NVKDVFAKVG YNPQITVIVA QKRHQTRFFP ATTSKDGRAK GNVPSGTVVD TTIIHPFEYD
1001: FYLCSQHGAI GTSKPTHYYV LSDEIGFNSN QIQKLIFDLC FTFTRCTKPV ALVPPVSYAD KAASRGRVYY EASLMKKNSK QSRGASSSSA SVASSSSSVT
1101: MEDKEIFKVH AGIENFMFFV
Arabidopsis Description
AGO3Protein argonaute 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.