Factsheet for VIT_01s0113g00500.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g00830.t01	Wine grape	nucleus	92.42	92.61
KRH70802	Soybean	nucleus	78.76	76.62
KRH74941	Soybean	nucleus	78.46	76.48
GSMUA_Achr7P26400_001	Banana	cytosol	47.26	74.41
Solyc01g010970.2.1	Tomato	nucleus	73.68	73.9
PGSC0003DMT400062439	Potato	nucleus	73.68	73.75
AT1G69440.1	Thale cress	cytosol	63.71	64.55
Bra003999.1-P	Field mustard	nucleus	62.21	63.61
CDY28550	Canola	cytosol, plastid	61.81	63.52
CDY07349	Canola	nucleus	62.31	63.52
CDY51501	Canola	nucleus	56.73	63.29
TraesCS2A01G414800.1	Wheat	nucleus	58.13	62.42
EER92100	Sorghum	cytosol	63.31	61.47
Zm00001d029573_P001	Maize	cytosol	63.01	61.24
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	59.82	59.29
Os03t0449200-00	Rice	nucleus	61.62	58.97
TraesCS2B01G434000.1	Wheat	nucleus	60.22	57.52
TraesCS2D01G412100.1	Wheat	plastid	59.62	53.54
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	30.01	38.74
VIT_11s0016g04620.t01	Wine grape	cytosol	34.5	38.23
VIT_10s0042g01180.t01	Wine grape	nucleus, plastid	34.6	36.6
VIT_08s0007g04360.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	30.61	36.08
VIT_05s0020g04190.t01	Wine grape	nucleus	31.11	35.54
VIT_10s0042g01150.t01	Wine grape	nucleus	34.3	35.14
VIT_10s0042g01200.t01	Wine grape	nucleus	34.5	34.81
VIT_06s0061g01040.t01	Wine grape	mitochondrion, nucleus	35.19	34.21
VIT_17s0053g00680.t01	Wine grape	nucleus	36.39	33.64
VIT_06s0009g01200.t01	Wine grape	nucleus	26.92	29.57
VIT_13s0175g00140.t01	Wine grape	nucleus	25.42	28.81
VIT_12s0059g01430.t01	Wine grape	nucleus	26.42	28.8
VIT_08s0040g00070.t01	Wine grape	nucleus	25.92	28.32

Protein Annotations

EntrezGene:100264433	wikigene:100264433	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1
InterPro:ArgoL1	InterPro:Argonaute_N	ProteinID:CCB47612	ProteinID:CCB47612.1	UniProt:F6H5X3	EMBL:FN595240
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	EntrezGene:LOC100264433
wikigene:LOC100264433	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699
PFAM:PF16486	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF9	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI000210871A	ArrayExpress:VIT_01s0113g00500	EnsemblPlantsGene:VIT_01s0113g00500	EnsemblPlants:VIT_01s0113g00500.t01	RefSeq:XP_002267746
RefSeq:XP_002267746.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:+:13829611..13833473

Molecular Weight (calculated)

113849.0 Da

IEP (calculated)

9.662

GRAVY (calculated)

-0.458

Length

1003 amino acids

Sequence
(BLAST)

0001: MEETDKSNAN KKCTPKGRSF SGRTNPNDHQ LFQYSNPFRF SNQNQYRSYS ALLPPPPPIP LQPTATPPLP QNQNFRSKAH LQKPSWKHDN PPRATSSDTQ
0101: VSLLTVSTED TERRASFSPR GENGRKVMAA TQAMVTARRP DSGGIEGPVI SLLANHFLVQ FDSSQRIFHY DVEISPNPSK EVARMIKRKL VEEKSVELSG
0201: ALPAFDGRKN LYSPVEFQND RLELFIGLPI PTSKSLSPSG EIKDAFQEKH PQIKLFRINI KLVSKFDGKE LNSYLSKEGD DWIPLPQDYL HALDIVLRES
0301: PTEKCVPVGR SLYSSSMGGT KEIGGGAVGL RGFFQSLRPT QQGLALNVDF SVTAFHESIG IIPYLQKRVE FLRDLSQRKT RGLTGEERKE VEKALKNIRV
0401: FVCHRETVQR YRVHSLTEET TENLWFKDRD GKILRLVNYF KDHYSYDIQF RNLPCLQITS SKPCYLPMEL CMICEGQKFL GKLSDDQTAR ILKMGCQRPR
0501: ERKAIIDGVM RGAVGPTSGS QEREFKLDVS REMTRLNGRV LEPPKLKLGD GGHVRDLIPS RHDRQWNLLD SHVFEGTHIE RWALISFGGT PDQKSNIPRF
0601: IIQLSQRCEQ LGILLNKNTI MSPQFEPIQV LNNVSLLESK LKKIHRTALN NLQLLMCIME RKHKGYADLK RIAETSIGVV SQCCLYQNLG KLSSQFLANL
0701: ALKINAKVGG CTVALYNSLP SQIPRLLRPD EPVIFMGADV THPHPLDDFS PSIAAVVGSM NWPSANKYVS RMRSQTHRQE IIQDLGAMVG EILDDFYQQV
0801: SQLPKRIIFF RDGVSETQFY KVLQEELQAI RVACSRFPSY RPPITFAVVQ KRHHTRLFPN ESNPSSIGNQ FSDDNIPPGT VVDAVITHPR EFDFYLCSHW
0901: GVKGTSRPTH YHVLWDDNHF TSDELQKLVY NLCYTFVRCT KPVSLVPPAY YAHLAAYRGR LYLERSEFTA LARSTSALSR AAPPKTAPLP KLSENVKKLM
1001: FYC

Best Arabidopsis Sequence Match ( AT1G69440.1 )
(BLAST)

001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC

Arabidopsis Description

AGO7Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.