Factsheet for TraesCS2D01G412100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G414800.1	Wheat	nucleus	82.27	98.39
TraesCS2B01G434000.1	Wheat	nucleus	92.03	97.9
HORVU0Hr1G005350.1	Barley	cytosol, golgi, mitochondrion	87.65	96.74
Os03t0449200-00	Rice	nucleus	73.95	78.82
EER92100	Sorghum	cytosol	71.8	77.64
Zm00001d029573_P001	Maize	cytosol	70.99	76.84
GSMUA_Achr7P26400_001	Banana	cytosol	39.66	69.54
VIT_03s0038g00830.t01	Wine grape	nucleus	53.72	59.94
VIT_01s0113g00500.t01	Wine grape	nucleus	53.54	59.62
KRH70802	Soybean	nucleus	53.36	57.81
KRH74941	Soybean	nucleus	53.18	57.73
PGSC0003DMT400062439	Potato	nucleus	51.75	57.68
Solyc01g010970.2.1	Tomato	nucleus	51.57	57.6
CDY51501	Canola	nucleus	44.32	55.06
Bra003999.1-P	Field mustard	nucleus	48.08	54.74
CDY07349	Canola	nucleus	47.72	54.17
CDY28550	Canola	cytosol, plastid	46.82	53.59
AT1G69440.1	Thale cress	cytosol	47.0	53.03
TraesCS7D01G552900.1	Wheat	mitochondrion	17.73	43.52
TraesCS7D01G553200.1	Wheat	nucleus, plastid	17.99	41.96
TraesCS4D01G024300.1	Wheat	cytosol	20.23	41.09
TraesCS4D01G024100.1	Wheat	plastid	29.72	38.74
TraesCS3D01G118600.1	Wheat	cytosol, mitochondrion, nucleus	26.41	35.12
TraesCS7D01G351700.1	Wheat	cytosol	29.9	35.08
TraesCS7D01G553000.1	Wheat	cytosol	31.15	33.75
TraesCS7D01G061600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	15.85	33.59
TraesCS5D01G454600.1	Wheat	cytosol	22.2	33.47
TraesCS6D01G166300.1	Wheat	plastid	28.38	33.33
TraesCS1D01G151300.3	Wheat	plastid	25.16	33.1
TraesCS2D01G176500.1	Wheat	golgi, unclear	29.99	32.3
TraesCS6D01G403900.1	Wheat	plastid	30.44	32.23
TraesCS7D01G458800.1	Wheat	nucleus	13.43	32.19
TraesCS2D01G400200.1	Wheat	nucleus	31.51	32.03
TraesCS5D01G454200.1	Wheat	cytosol, nucleus, plastid	29.54	31.34
TraesCS6D01G235900.1	Wheat	endoplasmic reticulum	31.07	31.18
TraesCS2D01G417000.1	Wheat	nucleus	28.56	30.44
TraesCS7D01G036100.3	Wheat	endoplasmic reticulum, golgi	31.07	28.68
TraesCS5D01G169500.1	Wheat	cytosol	21.67	27.44
TraesCS1D01G453600.1	Wheat	nucleus	22.2	26.9
TraesCS2D01G416500.1	Wheat	nucleus	24.62	26.02
TraesCS7D01G520400.1	Wheat	nucleus	20.86	25.63
TraesCS3D01G191600.5	Wheat	nucleus	22.74	25.35
TraesCS7D01G458900.1	Wheat	mitochondrion	3.4	20.88
TraesCS5D01G192700.2	Wheat	nucleus	16.29	19.3

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009791
GO:GO:0009987	GO:GO:0010050	GO:GO:0010267	GO:GO:0010492	GO:GO:0010599	GO:GO:0016246
GO:GO:0040029	GO:GO:0040034	GO:GO:0051607	GO:GO:0060145	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699
PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF9
InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163
SUPFAM:SSF101690	SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS2D01G412100	EnsemblPlants:TraesCS2D01G412100.1	TIGR:cd02846	TIGR:cd04657
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:526804359..526808624

Molecular Weight (calculated)

124629.0 Da

IEP (calculated)

9.706

GRAVY (calculated)

-0.431

Length

1117 amino acids

Sequence
(BLAST)

0001: MPTPSPLPTP TPPSFTSPSF PSFCPPTFQP SKKTPTHNPR TRQEAGVLPH QNLHTDRLVW VNSPSESLAA AMEREGAAKV ERKAGRGGDG RTAGSNGGGG
0101: GGGGSGGNGR WKWSGVCGSG GGGHRQYPII QAYPALLPLP INSGRAHNNG AVALPLPPPV LLYLQQPPPL HLLPAAATCY GKPMAGAAQR GPMWTHRPSK
0201: KPPPPPHAVT AALLPLPQDA KTLPHKKFSI HEKKASDVGM DHANGHHRPS SNHQRSPIAQ RPDNGGIEGA VIPLSANYFL VRFNPDQKIF QYDIDITPHP
0301: SKETARMIKN KLVQENSSVL SGALPAFDGR RDLYSAIEFQ ENKAEFFVNL PVASARCPVD KKNGHMLDRQ NFKVFKVNIR LVSKLSGEDL NKFLTEDKDG
0401: ISLPQDYLHA LEVILREGAM ESSVLVGRSL YPRSMGEARE IGGGAVGLRG FFQSLRPTKQ GLALNVDLSL TAFHESTGMI VYLQKRFDFL KDLSHQKTRA
0501: LSEEERREVE KALKNIQVRV CHRETDQRYH VHSLTKETTK NLKFRDRSAK DLMVVDYFKE QYNHDIQFRN MPCLQIGRSK PCYVPMELCV VCEGQKFLGK
0601: LSDEQTSKVL RMGCQRPSER KGIIKGIVEE EFGAGSNSYA DQFNLQVSKD MTQLSGRVLL PPRLKFGSGG RITDMTPHRF DRQWSLLDSH VTDGSKIKNW
0701: ALISFGGTPE QHSYIPKFVN QLSSRCEQLG ILLNKKPVIS PLFERIQLLN NPGILESKLG KIQEAAAGNL QLLICVMERR HRGYADLKRI AETSIGLVTQ
0801: CCLYPNLSKL TVQFVANLAL KMNAKLGGCN VSLYNSLPCQ IPRIFSDEEP VMFMGADVTH PHPLDDSSPS VVAVVASMNW PAANKYISRM RSQTHRKEII
0901: EHLDVMTGEL LEEFLKEVGK LPGRIIFFRD GVSETQFDKV LKEEMHALRV ACLRYPGYKP LTTFVVVQKR HHTRLFHREK NGGSTHYSDQ NIPPGTVVDT
1001: VITHPREFDF YLCSHWGTKG TSRPTHYHVL LDENRFQSDE VQQLIHNLCY TFVRCTRPVS LVPPAYYAHL AAYRGRLYLE KSDSVATSCT TLYRSTPLQT
1101: TPLPKLSDSV KRLMFYC

Best Arabidopsis Sequence Match ( AT1G69440.1 )
(BLAST)

001: MEEKTHHHHH STNKHIPSSK SRTPLLHKPY HHHVQTNPPP FLLHPSSHQN LNLVASNLPS SYYYYYYCYF YSQFHNSLPP PPPPHLLPLS PPLPPLLPLP
101: PPHSMTRFHK SLPVSQVVER KQQHQQKKKI QVSNNKVSGS IAIEEAALVV AKRPDFGGQD GSVIYLLANH FLVKFDSSQR IYHYNVEISP QPSKEIARMI
201: KQKLVETDRN SFSGVVPAFD GRQNIYSPVE FQGDRLEFFV NLPIPSCKAV MNYGDLREKQ PQKKIEKLFR VNMKLVSKFD GKEQRKEGED WAPLPPEYIH
301: ALDVILRENP MEKCTSIGRS FYSSSMGGSK EIGGGAVGLR GFFQSLRHTQ QGLALNMDLS ITAFHESIGV IAYLQKRLEF LTDLPRNKGR ELSLEEKREV
401: EKALKNIRVF VCHRETVQRY RVYGLTEEIT ENIWFPDREG KYLRLMSYFK DHYGYEIQFK NLPCLQISRA RPCYLPMELC MICEGQKFLG KLSDDQAAKI
501: MKMGCQKPNE RKAIIDKVMT GSVGPSSGNQ TREFNLEVSR EMTLLKGRIL QPPKLKLDRP RNLKESKVFK GTRIERWALM SIGGSSDQKS TIPKFINELT
601: QKCEHLGVFL SKNTLSSTFF EPSHILNNIS LLESKLKEIQ RAASNNLQLI ICVMEKKHKG YGDLKRISET RIGVVTQCCL YPNITKLSSQ FVSNLALKIN
701: AKIGGSMTEL YNSIPSHIPR LLRPDEPVIF MGADVTHPHP FDDCSPSVAA VVGSINWPEA NRYVSRMRSQ THRQEIIQDL DLMVKELLDD FYKAVKKLPN
801: RIIFFRDGVS ETQFKKVLQE ELQSIKTACS KFQDYNPSIT FAVVQKRHHT RLFRCDPDHE NIPPGTVVDT VITHPKEFDF YLCSHLGVKG TSRPTHYHIL
901: WDENEFTSDE LQRLVYNLCY TFVRCTKPIS IVPPAYYAHL AAYRGRLYIE RSSESNGGSM NPSSVSRVGP PKTIPLPKLS DNVKNLMFYC

Arabidopsis Description

AGO7Protein argonaute 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C793]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.