Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G419900.1 | Wheat | nucleus | 98.57 | 98.47 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 98.09 | 98.28 |
| HORVU2Hr1G098650.1 | Barley | nucleus | 95.52 | 95.61 |
| Os04t0615700-01 | Rice | nucleus, plasma membrane | 72.52 | 73.5 |
| Zm00001d026300_P001 | Maize | nucleus | 60.59 | 72.08 |
| Zm00001d002316_P003 | Maize | plastid | 58.59 | 71.73 |
| KXG27113 | Sorghum | nucleus | 69.85 | 67.03 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 48.76 | 48.34 |
| KRH36727 | Soybean | nucleus | 19.56 | 45.25 |
| PGSC0003DMT400054667 | Potato | cytosol | 29.2 | 41.92 |
| VIT_10s0042g01180.t01 | Wine grape | nucleus, plastid | 36.93 | 40.82 |
| KRG89432 | Soybean | nucleus | 37.4 | 40.58 |
| Solyc02g069270.2.1 | Tomato | cytosol | 37.79 | 40.53 |
| VIT_10s0042g01150.t01 | Wine grape | nucleus | 37.4 | 40.04 |
| CDY70429 | Canola | plastid | 33.11 | 39.12 |
| VIT_10s0042g01200.t01 | Wine grape | nucleus | 36.55 | 38.53 |
| Solyc02g069260.2.1 | Tomato | nucleus | 37.79 | 38.0 |
| PGSC0003DMT400054669 | Potato | cytosol | 37.98 | 37.87 |
| CDY02373 | Canola | nucleus | 36.55 | 37.44 |
| AT1G31280.1 | Thale cress | nucleus | 36.16 | 37.38 |
| Bra023172.1-P | Field mustard | nucleus | 36.83 | 37.22 |
| KRH11732 | Soybean | nucleus | 36.64 | 37.03 |
| Solyc02g069280.2.1 | Tomato | nucleus | 35.21 | 36.94 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 16.03 | 36.92 |
| Bra040815.1-P | Field mustard | cytosol | 35.5 | 36.87 |
| CDY25885 | Canola | cytosol | 35.5 | 36.83 |
| CDY55876 | Canola | cytosol | 36.35 | 36.81 |
| TraesCS4D01G024300.1 | Wheat | cytosol | 19.27 | 36.73 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 16.51 | 36.12 |
| PGSC0003DMT400054661 | Potato | nucleus | 31.68 | 33.88 |
| AT1G31290.1 | Thale cress | nucleus | 37.21 | 32.66 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 14.5 | 32.62 |
| TraesCS4D01G024100.1 | Wheat | plastid | 26.62 | 32.56 |
| TraesCS7D01G351700.1 | Wheat | cytosol | 29.2 | 32.14 |
| TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 25.67 | 32.02 |
| TraesCS5D01G454600.1 | Wheat | cytosol | 22.52 | 31.85 |
| TraesCS7D01G061600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 15.65 | 31.12 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 30.06 | 30.55 |
| TraesCS5D01G454200.1 | Wheat | cytosol, nucleus, plastid | 30.44 | 30.29 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 29.87 | 30.18 |
| TraesCS6D01G166300.1 | Wheat | plastid | 27.39 | 30.18 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 31.3 | 29.85 |
| TraesCS5D01G169500.1 | Wheat | cytosol | 24.9 | 29.59 |
| TraesCS1D01G151300.3 | Wheat | plastid | 23.95 | 29.56 |
| TraesCS6D01G403900.1 | Wheat | plastid | 29.2 | 29.0 |
| TraesCS2D01G412100.1 | Wheat | plastid | 30.44 | 28.56 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 29.58 | 27.85 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 24.33 | 27.66 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 31.68 | 27.44 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 23.19 | 26.73 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 24.14 | 25.25 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 3.24 | 18.68 |
| TraesCS5D01G192700.2 | Wheat | nucleus | 16.7 | 18.56 |
| Os04t0615800-01 | Rice | nucleus | 0.38 | 0.76 |
Protein Annotations
| MapMan:12.5.1.15.2 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf |
| PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 |
| PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF4 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 |
| EnsemblPlantsGene:TraesCS2D01G417000 | EnsemblPlants:TraesCS2D01G417000.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:-:531347374..531352766
Molecular Weight (calculated)
113163.0 Da
IEP (calculated)
9.658
GRAVY (calculated)
-0.393
Length
1048 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDYEQGGGGG RGRGRSRGGG GRGGAPGGYG PQGGGGGYGG GGQGRGAQGS GGGYGGGGGY GPQGGMEGRG GGYAPRGGGY APRGGGEGRG RGYGPQGGGD
0101: GRGGGYGGGG PGGRGPAGGG RGYGPGGGRG ANAWAQPGRG PAGGPGEYVP VRAPAPASAA RRVESEEAGG SSGSVERISS KEVSKLEPLA PPVAVSPNGI
0201: RVPMQRPDGG GSLCQARVQL LVNHFIVKYP KLSTFFHYDI DIKFDPASSK VSGKELSNAD FLSAKAELFK DDSFRQLSSA VAYDGKRNLF TVAQLPEGLF
0301: RVRVCSKTYI VSVEFKKQLP LSQLSELPVA REILQGLDVI VREASSWSKI ILGHGFYSPQ SKVDMGSGVV SMKGTQQTLK HTQQGLVLCV DYSVMPFRRD
0401: GPVLDIVRQF IKPLPLDYRT ALNKTHREKL VYELKGQRVT VSHRKTKQKY TIQGFTDLPA SQITFLDSES GQSRKLVDYF AQQYGKVIEY QMLPCLDLSK
0501: SKDKPNYVPI ELCKLVEGQR YPMANLNKDT DRALKGKALI KAAERKWEIE TAVKAEDGPC RGEIAQQFGI SLDVKMMEVT GRVLSPPMLT LGSSRGAPGN
0601: LSITPSNCQW NLMGKKLVEG KALQCWGIVD FSARPSHNKQ QALDGNMFIN YIVRKCCDLG IQMNKTACFV HLSAMSVLSD PHQLYEELNK AKQAAVKKNQ
0701: KLQLLFCPMS EQHPGYKTLK LICETQLGIQ TQCFLSHLAN KTQGQDQYMS NLALKINSKL GGINVQLQDK LPLDNGAPYM FIGADVNHPS PGNVESPSIA
0801: AVVASMNRGA TKYVPRIRAQ PHRCEVIKNL GEIVQELIGV FEKKAGVKPQ RIIYFRDGVS DGQFEMVLNE ELADMEKVIK VKGYSPTITV IVAKKRHHTR
0901: LFPKEHNEPL QTKNGNVLPG TVVDTRIVDP VTYDFYLCSH NGLIGTSRPT HYYNLMDEHG YGSDDLQRLV YNLCFVFARC TKPVSLATPV YYADLAAYRG
1001: RLYYEGMLAS QPQVRSSSSS ASSAAAGASD FSNFPMLHVD LQDNMFFI
0101: GRGGGYGGGG PGGRGPAGGG RGYGPGGGRG ANAWAQPGRG PAGGPGEYVP VRAPAPASAA RRVESEEAGG SSGSVERISS KEVSKLEPLA PPVAVSPNGI
0201: RVPMQRPDGG GSLCQARVQL LVNHFIVKYP KLSTFFHYDI DIKFDPASSK VSGKELSNAD FLSAKAELFK DDSFRQLSSA VAYDGKRNLF TVAQLPEGLF
0301: RVRVCSKTYI VSVEFKKQLP LSQLSELPVA REILQGLDVI VREASSWSKI ILGHGFYSPQ SKVDMGSGVV SMKGTQQTLK HTQQGLVLCV DYSVMPFRRD
0401: GPVLDIVRQF IKPLPLDYRT ALNKTHREKL VYELKGQRVT VSHRKTKQKY TIQGFTDLPA SQITFLDSES GQSRKLVDYF AQQYGKVIEY QMLPCLDLSK
0501: SKDKPNYVPI ELCKLVEGQR YPMANLNKDT DRALKGKALI KAAERKWEIE TAVKAEDGPC RGEIAQQFGI SLDVKMMEVT GRVLSPPMLT LGSSRGAPGN
0601: LSITPSNCQW NLMGKKLVEG KALQCWGIVD FSARPSHNKQ QALDGNMFIN YIVRKCCDLG IQMNKTACFV HLSAMSVLSD PHQLYEELNK AKQAAVKKNQ
0701: KLQLLFCPMS EQHPGYKTLK LICETQLGIQ TQCFLSHLAN KTQGQDQYMS NLALKINSKL GGINVQLQDK LPLDNGAPYM FIGADVNHPS PGNVESPSIA
0801: AVVASMNRGA TKYVPRIRAQ PHRCEVIKNL GEIVQELIGV FEKKAGVKPQ RIIYFRDGVS DGQFEMVLNE ELADMEKVIK VKGYSPTITV IVAKKRHHTR
0901: LFPKEHNEPL QTKNGNVLPG TVVDTRIVDP VTYDFYLCSH NGLIGTSRPT HYYNLMDEHG YGSDDLQRLV YNLCFVFARC TKPVSLATPV YYADLAAYRG
1001: RLYYEGMLAS QPQVRSSSSS ASSAAAGASD FSNFPMLHVD LQDNMFFI
0001: MDRGGYRGGR GDGRGRGGGG DRGRGYSGRG RGFVQDRDGG WVNPGQSSGG HVRGRGTQLQ QPPPQEVPPS SSQAQVSQGV APGDVGQGGV GDVGRDGVGD
0101: VGRDGVGDVG QGGVGDVGQV GVGDVGQGGV GDVGQGGVGD VGRDGVGDVG RDGVGDVGRG GVGDRGQSQS GLSSGHFGRG TQLQQPQPQA VSQSSSQGQV
0201: SQSFATGGVG LGAWARKPQL FSDSTVLPSS SSSNVVASHT ASGSQVMTPK PSSSDKKEPV KRPDKGGNIK VKGVINLSVN HFRVSFSTES VIRHYDVDIK
0301: GENSSKKISR FELAMVKEKL FKDNNDFPNA MTAYDGQKNI FSAVELPTGS FKVDFSETEE IMRGRSYTFI IKQVKELKLL DLQAYIDGRS TFIPRDVLQG
0401: MDVVMKEHPS KRMITVGKRF FSTRLEIDFG YGVGAAKGFH HTLKPTVQGL SLCLNSSLLA FRKAISVIEY LKLYFGWRNI RQFKNCRPDD VVQELIGLKV
0501: TVDHRKTKQK FIIMGLSKDD TKDIKFDFID HAGNQPPRKI SIVEYFKEKY GRDIDHKDIP CLNLGKKGRE NFVPMEFCNL VEGQIFPKEK LYRDSAAWLK
0601: ELSLVTPQQR LENINKMIKS SDGPRGGDII GNFGLRVDPN MTTVEGRVLE APTLKLTDRR GNPIHEKLMS ESNQWNLTTK GVTKGSIIKH WAVLDFTASE
0701: SLKKKMPGYF VNKLIERCKG LGMQMEAPIV CKTSSMETLY DGNALEELLR SVIDEASHNH GGACPTLVLC AMTGKHDGYK TLKWIAETKL GLVTQCFLTI
0801: SAIKGETVSD QYLANLALKI NAKVGGTNVE LVDNIFSFFK KEDKVMFIGA DVNHPAAHDN MSPSIVAVVG TLNWPEANRY AARVKAQSHR KEEIQGFGET
0901: CWELIEAHSQ APEKRPNKIV IFRDGVSDGQ FDMVLNVELQ NVKDVFAKVG YNPQITVIVA QKRHQTRFFP ATTSKDGRAK GNVPSGTVVD TTIIHPFEYD
1001: FYLCSQHGAI GTSKPTHYYV LSDEIGFNSN QIQKLIFDLC FTFTRCTKPV ALVPPVSYAD KAASRGRVYY EASLMKKNSK QSRGASSSSA SVASSSSSVT
1101: MEDKEIFKVH AGIENFMFFV
0101: VGRDGVGDVG QGGVGDVGQV GVGDVGQGGV GDVGQGGVGD VGRDGVGDVG RDGVGDVGRG GVGDRGQSQS GLSSGHFGRG TQLQQPQPQA VSQSSSQGQV
0201: SQSFATGGVG LGAWARKPQL FSDSTVLPSS SSSNVVASHT ASGSQVMTPK PSSSDKKEPV KRPDKGGNIK VKGVINLSVN HFRVSFSTES VIRHYDVDIK
0301: GENSSKKISR FELAMVKEKL FKDNNDFPNA MTAYDGQKNI FSAVELPTGS FKVDFSETEE IMRGRSYTFI IKQVKELKLL DLQAYIDGRS TFIPRDVLQG
0401: MDVVMKEHPS KRMITVGKRF FSTRLEIDFG YGVGAAKGFH HTLKPTVQGL SLCLNSSLLA FRKAISVIEY LKLYFGWRNI RQFKNCRPDD VVQELIGLKV
0501: TVDHRKTKQK FIIMGLSKDD TKDIKFDFID HAGNQPPRKI SIVEYFKEKY GRDIDHKDIP CLNLGKKGRE NFVPMEFCNL VEGQIFPKEK LYRDSAAWLK
0601: ELSLVTPQQR LENINKMIKS SDGPRGGDII GNFGLRVDPN MTTVEGRVLE APTLKLTDRR GNPIHEKLMS ESNQWNLTTK GVTKGSIIKH WAVLDFTASE
0701: SLKKKMPGYF VNKLIERCKG LGMQMEAPIV CKTSSMETLY DGNALEELLR SVIDEASHNH GGACPTLVLC AMTGKHDGYK TLKWIAETKL GLVTQCFLTI
0801: SAIKGETVSD QYLANLALKI NAKVGGTNVE LVDNIFSFFK KEDKVMFIGA DVNHPAAHDN MSPSIVAVVG TLNWPEANRY AARVKAQSHR KEEIQGFGET
0901: CWELIEAHSQ APEKRPNKIV IFRDGVSDGQ FDMVLNVELQ NVKDVFAKVG YNPQITVIVA QKRHQTRFFP ATTSKDGRAK GNVPSGTVVD TTIIHPFEYD
1001: FYLCSQHGAI GTSKPTHYYV LSDEIGFNSN QIQKLIFDLC FTFTRCTKPV ALVPPVSYAD KAASRGRVYY EASLMKKNSK QSRGASSSSA SVASSSSSVT
1101: MEDKEIFKVH AGIENFMFFV
Arabidopsis Description
AGO3Protein argonaute 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.