Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol, nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G067500.2 | Wheat | cytosol | 98.48 | 60.77 |
| Os02t0616300-00 | Rice | vacuole | 22.01 | 35.05 |
| TraesCS4D01G024300.1 | Wheat | cytosol | 36.05 | 34.55 |
| TraesCS7D01G552900.1 | Wheat | mitochondrion | 27.7 | 32.09 |
| TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 28.84 | 31.73 |
| TraesCS5D01G454600.1 | Wheat | cytosol | 44.4 | 31.58 |
| TraesCS4D01G024100.1 | Wheat | plastid | 45.54 | 28.0 |
| VIT_08s0007g04360.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 43.64 | 27.03 |
| TraesCS7D01G458800.1 | Wheat | nucleus | 22.01 | 24.89 |
| TraesCS7D01G351700.1 | Wheat | cytosol | 43.64 | 24.16 |
| KRH25139 | Soybean | plastid | 44.02 | 24.14 |
| TraesCS5D01G454200.1 | Wheat | cytosol, nucleus, plastid | 47.63 | 23.84 |
| CDY04517 | Canola | plastid | 43.26 | 23.82 |
| CDX71410 | Canola | nucleus | 42.88 | 23.74 |
| Bra011993.1-P | Field mustard | plastid | 43.26 | 23.6 |
| VIT_06s0061g01040.t01 | Wine grape | mitochondrion, nucleus | 45.92 | 23.45 |
| KRH30536 | Soybean | plastid | 39.47 | 23.37 |
| TraesCS1D01G151300.3 | Wheat | plastid | 37.38 | 23.2 |
| TraesCS6D01G166300.1 | Wheat | plastid | 41.75 | 23.13 |
| TraesCS2D01G176500.1 | Wheat | golgi, unclear | 45.35 | 23.05 |
| PGSC0003DMT400018363 | Potato | cytosol, nucleus, plastid | 44.4 | 22.83 |
| Solyc06g074730.2.1 | Tomato | nucleus | 43.26 | 22.55 |
| TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 35.86 | 22.5 |
| AT2G27880.1 | Thale cress | cytosol, nucleus, plastid | 42.5 | 22.47 |
| TraesCS2D01G400200.1 | Wheat | nucleus | 46.49 | 22.29 |
| TraesCS7D01G553000.1 | Wheat | cytosol | 43.26 | 22.11 |
| TraesCS6D01G403900.1 | Wheat | plastid | 43.45 | 21.71 |
| TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 45.35 | 21.47 |
| TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 45.92 | 20.0 |
| TraesCS5D01G169500.1 | Wheat | cytosol | 32.64 | 19.5 |
| TraesCS1D01G453600.1 | Wheat | nucleus | 32.64 | 18.66 |
| TraesCS7D01G520400.1 | Wheat | nucleus | 31.12 | 18.04 |
| TraesCS3D01G191600.5 | Wheat | nucleus | 34.16 | 17.96 |
| TraesCS5D01G192700.2 | Wheat | nucleus | 31.88 | 17.82 |
| TraesCS2D01G412100.1 | Wheat | plastid | 33.59 | 15.85 |
| TraesCS2D01G417000.1 | Wheat | nucleus | 31.12 | 15.65 |
| TraesCS2D01G416500.1 | Wheat | nucleus | 26.38 | 13.15 |
| TraesCS7D01G458900.1 | Wheat | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom |
| InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 |
| PANTHER:PTHR22891:SF24 | InterPro:Piwi | InterPro:RNaseH-like_sf | InterPro:RNaseH_sf | SMART:SM00949 | SMART:SM00950 |
| SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS7D01G061600 | EnsemblPlants:TraesCS7D01G061600.1 | TIGR:cd02846 | : |
Description
No Description!
Coordinates
chr7D:+:33434207..33440821
Molecular Weight (calculated)
59476.3 Da
IEP (calculated)
8.833
GRAVY (calculated)
-0.209
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKFVGEFLG RTDFNRAFSH KEYAKIERAL KGVQVETIHH TDRTMKYRIK GLSVVPLKEL MFSVDDDGIM TTVVDYYQSR YNCKLEYIHW PCLQCGVSGR
101: QIYLPMEVCK LVQGQRYRQK LSTTQAAKLL KITCKRPQNR LNGILKAARG NFDVEELTEG EFSASGFPKV LYGSVLSAPL LKYGNEEIFM PIGGQWNMAN
201: KVFEGKPLAV QQSSNFMDIQ SALESLLSYI SELFTDEGNC QRLQLLIVVL PEEKGHYGTI KRICETQLGI VSQCCLPKYV KAKVNVEYLE NVALKINVKA
301: GGRNAILQEG LPFLSDIPTI IFGADVSHPS PGVYSSSVSA VSILICVISA QQPKQEIITK LFQVTQDSNG CVKTDSMIKE LLLNFYQKNR RKPERIIFYR
401: DGVSESQFSP VLLHEVDAIR KACISLDEHY VPPITFLVVQ KRHQTRLFPL PTTRKPEPKG IRKPEPKGIL PVPPVYYAHL AASRGRSYQG NFGDGSSIRE
501: TTPGDELPEF LQVPKIHENV SEVMFYC
101: QIYLPMEVCK LVQGQRYRQK LSTTQAAKLL KITCKRPQNR LNGILKAARG NFDVEELTEG EFSASGFPKV LYGSVLSAPL LKYGNEEIFM PIGGQWNMAN
201: KVFEGKPLAV QQSSNFMDIQ SALESLLSYI SELFTDEGNC QRLQLLIVVL PEEKGHYGTI KRICETQLGI VSQCCLPKYV KAKVNVEYLE NVALKINVKA
301: GGRNAILQEG LPFLSDIPTI IFGADVSHPS PGVYSSSVSA VSILICVISA QQPKQEIITK LFQVTQDSNG CVKTDSMIKE LLLNFYQKNR RKPERIIFYR
401: DGVSESQFSP VLLHEVDAIR KACISLDEHY VPPITFLVVQ KRHQTRLFPL PTTRKPEPKG IRKPEPKGIL PVPPVYYAHL AASRGRSYQG NFGDGSSIRE
501: TTPGDELPEF LQVPKIHENV SEVMFYC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRIRYIPVGR SFYSPDIGKK QSLGDGLESW RGFYQSIRPT QMGLSLNIDM SSTAFIEANP VIQFVCDLLN
0401: RDISSRPLSD ADRVKIKKAL RGVKVEVTHR GNMRRKYRIS GLTAVATREL TFPVDERNTQ KSVVEYFHET YGFRIQHTQL PCLQVGNSNR PNYLPMEVCK
0501: IVEGQRYSKR LNERQITALL KVTCQRPIDR EKDILQTVQL NDYAKDNYAQ EFGIKISTSL ASVEARILPP PWLKYHESGR EGTCLPQVGQ WNMMNKKMIN
0601: GGTVNNWICI NFSRQVQDNL ARTFCQELAQ MCYVSGMAFN PEPVLPPVSA RPEQVEKVLK TRYHDATSKL SQGKEIDLLI VILPDNNGSL YGDLKRICET
0701: ELGIVSQCCL TKHVFKMSKQ YMANVALKIN VKVGGRNTVL VDALSRRIPL VSDRPTIIFG ADVTHPHPGE DSSPSIAAVV ASQDWPEITK YAGLVCAQAH
0801: RQELIQDLFK EWKDPQKGVV TGGMIKELLI AFRRSTGHKP LRIIFYRDGV SEGQFYQVLL YELDAIRKAC ASLEAGYQPP VTFVVVQKRH HTRLFAQNHN
0901: DRHSVDRSGN ILPGTVVDSK ICHPTEFDFY LCSHAGIQGT SRPAHYHVLW DENNFTADGL QSLTNNLCYT YARCTRSVSI VPPAYYAHLA AFRARFYMEP
1001: ETSDSGSMAS GSMARGGGMA GRSTRGPNVN AAVRPLPALK ENVKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.