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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 2
  • cytosol 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G165900.1 Wheat cytosol 98.87 98.75
HORVU0Hr1G012490.1 Barley nucleus 98.3 98.19
TraesCS5B01G162300.1 Wheat mitochondrion 98.87 97.1
Os07t0265600-01 Rice cytosol, nucleus 30.39 86.73
KXG23356 Sorghum nucleus 85.49 85.58
Zm00001d019905_P003 Maize nucleus 84.81 81.22
CDY68123 Canola cytosol, endoplasmic reticulum, nucleus 17.57 65.68
GSMUA_Achr9P22630_001 Banana nucleus 66.44 65.4
Bra022057.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 15.99 65.28
VIT_12s0059g01430.t01 Wine grape nucleus 67.46 64.67
Solyc07g049500.2.1 Tomato nucleus 63.38 61.9
CDX84712 Canola nucleus 60.43 61.48
Bra022918.1-P Field mustard nucleus 60.43 61.48
CDX79495 Canola nucleus 59.86 60.9
AT2G32940.1 Thale cress nucleus 59.18 59.45
KRH20672 Soybean nucleus 60.66 58.6
TraesCS7D01G458800.1 Wheat nucleus 30.39 57.51
TraesCS1D01G453600.1 Wheat nucleus 57.94 55.42
GSMUA_Achr9P27810_001 Banana plastid 54.65 55.34
TraesCS7D01G520400.1 Wheat nucleus 54.54 52.92
TraesCS3D01G191600.5 Wheat nucleus 59.52 52.4
TraesCS7D01G458900.1 Wheat mitochondrion 8.96 43.41
TraesCS4D01G024300.1 Wheat cytosol 23.47 37.64
TraesCS7D01G552900.1 Wheat mitochondrion 18.48 35.82
TraesCS7D01G553200.1 Wheat nucleus, plastid 19.16 35.28
TraesCS4D01G024100.1 Wheat plastid 33.67 34.66
TraesCS3D01G118600.1 Wheat cytosol, mitochondrion, nucleus 32.88 34.52
TraesCS5D01G454600.1 Wheat cytosol 28.46 33.87
TraesCS7D01G061600.1 Wheat cytosol, mitochondrion, nucleus, plastid 19.5 32.64
TraesCS6D01G166300.1 Wheat plastid 34.69 32.18
TraesCS7D01G351700.1 Wheat cytosol 34.69 32.14
TraesCS7D01G553000.1 Wheat cytosol 36.05 30.84
TraesCS1D01G151300.3 Wheat plastid 28.8 29.92
TraesCS6D01G403900.1 Wheat plastid 35.71 29.86
TraesCS2D01G400200.1 Wheat nucleus 36.51 29.3
TraesCS5D01G454200.1 Wheat cytosol, nucleus, plastid 34.92 29.25
TraesCS6D01G235900.1 Wheat endoplasmic reticulum 36.17 28.66
TraesCS2D01G176500.1 Wheat golgi, unclear 33.67 28.64
TraesCS7D01G036100.3 Wheat endoplasmic reticulum, golgi 36.73 26.78
TraesCS2D01G417000.1 Wheat nucleus 29.59 24.9
TraesCS2D01G412100.1 Wheat plastid 27.44 21.67
TraesCS5D01G192700.2 Wheat nucleus 22.34 20.89
TraesCS2D01G416500.1 Wheat nucleus 23.7 19.77
Protein Annotations
MapMan:12.5.1.13Gene3D:2.170.260.10Gene3D:3.30.420.10Gene3D:3.40.50.2300InterPro:ArgoL1InterPro:ArgoL2
InterPro:Argonaute_NGO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259
GO:GO:0006306GO:GO:0006342GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009605GO:GO:0009607GO:GO:0009987GO:GO:0016043GO:GO:0030422GO:GO:0035197
GO:GO:0040029GO:GO:0051607InterPro:IPR003100InterPro:IPR003165InterPro:IPR036397InterPro:PAZ_dom
InterPro:PAZ_dom_sfPFAM:PF02170PFAM:PF02171PFAM:PF08699PFAM:PF16486PFAM:PF16488
PFscan:PS50821PFscan:PS50822PANTHER:PTHR22891PANTHER:PTHR22891:SF35InterPro:PiwiInterPro:RNaseH-like_sf
InterPro:RNaseH_sfSMART:SM00950SMART:SM01163SUPFAM:SSF101690SUPFAM:SSF53098EnsemblPlantsGene:TraesCS5D01G169500
EnsemblPlants:TraesCS5D01G169500.1TIGR:cd02846TIGR:cd04657SEG:seg::
Description
No Description!
Coordinates
chr5D:+:265959995..265970101
Molecular Weight (calculated)
98068.5 Da
IEP (calculated)
9.619
GRAVY (calculated)
-0.280
Length
882 amino acids
Sequence
(BLAST)
001: MAAKTGGAVQ VHKNDTVKRT AMARTGLGRE GKPIRLLSNH FAVKLSGIDA VFYQYSVSIK SDDDQVVEGK GIGRKVIDKM LQTYSSELAG KDFAYDGEKC
101: LFTVGPLPQN NFEFTVIMEE TSARAVGGSP GHESPGPGDK KRVKRSHLPK QFVVGISYAA RIPLRSVALA LQGSDSDHAQ DALRVLDIVL RQQQAKRGCL
201: LVRQSFFSDD SRNLVDLTGG VSGCRGLHSS FRTTMNGLSL NMDVSTTMIV TPGPVVNFLL TNQNVRDVRD IDWPKAKRML KNLRVKATHN NMEFKIIGLS
301: DQPCSRQTFP MKVRSGSSEG QTVDITVEEY FKSKQVFLEK PYLPCLDVGK PKRPNYLPIE LGNMISLQRY TKALSSQQRT TLVEKSRQKP QDRMRVVTDA
401: VKSNRYDDDP IFSSCGIKID SQLTRVEGRV LSAPMLVVGN SQDCVPFKGR WNYNNKKLFE PVRIERWAIV NFSARCDMSR ISRELINCGR TKGIIIEGPY
501: SLVDEDNQAR RCAPIVRVER MFEKVKANLP GPPEFLLCVL PERKNCDIYG PWKKKNLHEM GIVTQCIVPS AKMNDQYFTN VLLKINAKLG GMNSKLALEH
601: SRQIPVINKI PTIILGMDVS HGSPGRSDIP SIAAVVGSRC WPLISRYRAS VRTQSPKVEM IDSLFKPLDN GKDDGIIREL LLDFYTTSQQ RKPEQIIIFR
701: DGVSESQFSQ VLNLEVDQII KAYQNMGQGP PPKITVIIAQ KNHHTKLFQA DAPDNVPAGT VVDKGIVHPK QYDFYMCAHA GPIGTSRPTH YHVLLDQIGF
801: TPDELQSLVL SLSYVYQRST TAISVVAPIC YAHLAAAQMS QFIKFEFADT SSGSGVPSSS TAATVPELPR LHADVCSSMF FC
Best Arabidopsis Sequence Match ( AT2G32940.1 )
(BLAST)
001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC
Arabidopsis Description
AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.