Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5A01G165900.1 | Wheat | cytosol | 98.87 | 98.75 |
HORVU0Hr1G012490.1 | Barley | nucleus | 98.3 | 98.19 |
TraesCS5B01G162300.1 | Wheat | mitochondrion | 98.87 | 97.1 |
Os07t0265600-01 | Rice | cytosol, nucleus | 30.39 | 86.73 |
KXG23356 | Sorghum | nucleus | 85.49 | 85.58 |
Zm00001d019905_P003 | Maize | nucleus | 84.81 | 81.22 |
CDY68123 | Canola | cytosol, endoplasmic reticulum, nucleus | 17.57 | 65.68 |
GSMUA_Achr9P22630_001 | Banana | nucleus | 66.44 | 65.4 |
Bra022057.1-P | Field mustard | endoplasmic reticulum, plasma membrane, plastid | 15.99 | 65.28 |
VIT_12s0059g01430.t01 | Wine grape | nucleus | 67.46 | 64.67 |
Solyc07g049500.2.1 | Tomato | nucleus | 63.38 | 61.9 |
CDX84712 | Canola | nucleus | 60.43 | 61.48 |
Bra022918.1-P | Field mustard | nucleus | 60.43 | 61.48 |
CDX79495 | Canola | nucleus | 59.86 | 60.9 |
AT2G32940.1 | Thale cress | nucleus | 59.18 | 59.45 |
KRH20672 | Soybean | nucleus | 60.66 | 58.6 |
TraesCS7D01G458800.1 | Wheat | nucleus | 30.39 | 57.51 |
TraesCS1D01G453600.1 | Wheat | nucleus | 57.94 | 55.42 |
GSMUA_Achr9P27810_001 | Banana | plastid | 54.65 | 55.34 |
TraesCS7D01G520400.1 | Wheat | nucleus | 54.54 | 52.92 |
TraesCS3D01G191600.5 | Wheat | nucleus | 59.52 | 52.4 |
TraesCS7D01G458900.1 | Wheat | mitochondrion | 8.96 | 43.41 |
TraesCS4D01G024300.1 | Wheat | cytosol | 23.47 | 37.64 |
TraesCS7D01G552900.1 | Wheat | mitochondrion | 18.48 | 35.82 |
TraesCS7D01G553200.1 | Wheat | nucleus, plastid | 19.16 | 35.28 |
TraesCS4D01G024100.1 | Wheat | plastid | 33.67 | 34.66 |
TraesCS3D01G118600.1 | Wheat | cytosol, mitochondrion, nucleus | 32.88 | 34.52 |
TraesCS5D01G454600.1 | Wheat | cytosol | 28.46 | 33.87 |
TraesCS7D01G061600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 19.5 | 32.64 |
TraesCS6D01G166300.1 | Wheat | plastid | 34.69 | 32.18 |
TraesCS7D01G351700.1 | Wheat | cytosol | 34.69 | 32.14 |
TraesCS7D01G553000.1 | Wheat | cytosol | 36.05 | 30.84 |
TraesCS1D01G151300.3 | Wheat | plastid | 28.8 | 29.92 |
TraesCS6D01G403900.1 | Wheat | plastid | 35.71 | 29.86 |
TraesCS2D01G400200.1 | Wheat | nucleus | 36.51 | 29.3 |
TraesCS5D01G454200.1 | Wheat | cytosol, nucleus, plastid | 34.92 | 29.25 |
TraesCS6D01G235900.1 | Wheat | endoplasmic reticulum | 36.17 | 28.66 |
TraesCS2D01G176500.1 | Wheat | golgi, unclear | 33.67 | 28.64 |
TraesCS7D01G036100.3 | Wheat | endoplasmic reticulum, golgi | 36.73 | 26.78 |
TraesCS2D01G417000.1 | Wheat | nucleus | 29.59 | 24.9 |
TraesCS2D01G412100.1 | Wheat | plastid | 27.44 | 21.67 |
TraesCS5D01G192700.2 | Wheat | nucleus | 22.34 | 20.89 |
TraesCS2D01G416500.1 | Wheat | nucleus | 23.7 | 19.77 |
Protein Annotations
MapMan:12.5.1.13 | Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | InterPro:ArgoL1 | InterPro:ArgoL2 |
InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 |
GO:GO:0006306 | GO:GO:0006342 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030422 | GO:GO:0035197 |
GO:GO:0040029 | GO:GO:0051607 | InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom |
InterPro:PAZ_dom_sf | PFAM:PF02170 | PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16488 |
PFscan:PS50821 | PFscan:PS50822 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF35 | InterPro:Piwi | InterPro:RNaseH-like_sf |
InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS5D01G169500 |
EnsemblPlants:TraesCS5D01G169500.1 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5D:+:265959995..265970101
Molecular Weight (calculated)
98068.5 Da
IEP (calculated)
9.619
GRAVY (calculated)
-0.280
Length
882 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKTGGAVQ VHKNDTVKRT AMARTGLGRE GKPIRLLSNH FAVKLSGIDA VFYQYSVSIK SDDDQVVEGK GIGRKVIDKM LQTYSSELAG KDFAYDGEKC
101: LFTVGPLPQN NFEFTVIMEE TSARAVGGSP GHESPGPGDK KRVKRSHLPK QFVVGISYAA RIPLRSVALA LQGSDSDHAQ DALRVLDIVL RQQQAKRGCL
201: LVRQSFFSDD SRNLVDLTGG VSGCRGLHSS FRTTMNGLSL NMDVSTTMIV TPGPVVNFLL TNQNVRDVRD IDWPKAKRML KNLRVKATHN NMEFKIIGLS
301: DQPCSRQTFP MKVRSGSSEG QTVDITVEEY FKSKQVFLEK PYLPCLDVGK PKRPNYLPIE LGNMISLQRY TKALSSQQRT TLVEKSRQKP QDRMRVVTDA
401: VKSNRYDDDP IFSSCGIKID SQLTRVEGRV LSAPMLVVGN SQDCVPFKGR WNYNNKKLFE PVRIERWAIV NFSARCDMSR ISRELINCGR TKGIIIEGPY
501: SLVDEDNQAR RCAPIVRVER MFEKVKANLP GPPEFLLCVL PERKNCDIYG PWKKKNLHEM GIVTQCIVPS AKMNDQYFTN VLLKINAKLG GMNSKLALEH
601: SRQIPVINKI PTIILGMDVS HGSPGRSDIP SIAAVVGSRC WPLISRYRAS VRTQSPKVEM IDSLFKPLDN GKDDGIIREL LLDFYTTSQQ RKPEQIIIFR
701: DGVSESQFSQ VLNLEVDQII KAYQNMGQGP PPKITVIIAQ KNHHTKLFQA DAPDNVPAGT VVDKGIVHPK QYDFYMCAHA GPIGTSRPTH YHVLLDQIGF
801: TPDELQSLVL SLSYVYQRST TAISVVAPIC YAHLAAAQMS QFIKFEFADT SSGSGVPSSS TAATVPELPR LHADVCSSMF FC
101: LFTVGPLPQN NFEFTVIMEE TSARAVGGSP GHESPGPGDK KRVKRSHLPK QFVVGISYAA RIPLRSVALA LQGSDSDHAQ DALRVLDIVL RQQQAKRGCL
201: LVRQSFFSDD SRNLVDLTGG VSGCRGLHSS FRTTMNGLSL NMDVSTTMIV TPGPVVNFLL TNQNVRDVRD IDWPKAKRML KNLRVKATHN NMEFKIIGLS
301: DQPCSRQTFP MKVRSGSSEG QTVDITVEEY FKSKQVFLEK PYLPCLDVGK PKRPNYLPIE LGNMISLQRY TKALSSQQRT TLVEKSRQKP QDRMRVVTDA
401: VKSNRYDDDP IFSSCGIKID SQLTRVEGRV LSAPMLVVGN SQDCVPFKGR WNYNNKKLFE PVRIERWAIV NFSARCDMSR ISRELINCGR TKGIIIEGPY
501: SLVDEDNQAR RCAPIVRVER MFEKVKANLP GPPEFLLCVL PERKNCDIYG PWKKKNLHEM GIVTQCIVPS AKMNDQYFTN VLLKINAKLG GMNSKLALEH
601: SRQIPVINKI PTIILGMDVS HGSPGRSDIP SIAAVVGSRC WPLISRYRAS VRTQSPKVEM IDSLFKPLDN GKDDGIIREL LLDFYTTSQQ RKPEQIIIFR
701: DGVSESQFSQ VLNLEVDQII KAYQNMGQGP PPKITVIIAQ KNHHTKLFQA DAPDNVPAGT VVDKGIVHPK QYDFYMCAHA GPIGTSRPTH YHVLLDQIGF
801: TPDELQSLVL SLSYVYQRST TAISVVAPIC YAHLAAAQMS QFIKFEFADT SSGSGVPSSS TAATVPELPR LHADVCSSMF FC
001: METSSSLPLS PISIEPEQPS HRDYDITTRR GVGTTGNPIE LCTNHFNVSV RQPDVVFYQY TVSITTENGD AVDGTGISRK LMDQLFKTYS SDLDGKRLAY
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC
101: DGEKTLYTVG PLPQNEFDFL VIVEGSFSKR DCGVSDGGSS SGTCKRSKRS FLPRSYKVQI HYAAEIPLKT VLGTQRGAYT PDKSAQDALR VLDIVLRQQA
201: AERGCLLVRQ AFFHSDGHPM KVGGGVIGIR GLHSSFRPTH GGLSLNIDVS TTMILEPGPV IEFLKANQSV ETPRQIDWIK AAKMLKHMRV KATHRNMEFK
301: IIGLSSKPCN QQLFSMKIKD GEREVPIREI TVYDYFKQTY TEPISSAYFP CLDVGKPDRP NYLPLEFCNL VSLQRYTKPL SGRQRVLLVE SSRQKPLERI
401: KTLNDAMHTY CYDKDPFLAG CGISIEKEMT QVEGRVLKPP MLKFGKNEDF QPCNGRWNFN NKMLLEPRAI KSWAIVNFSF PCDSSHISRE LISCGMRKGI
501: EIDRPFALVE EDPQYKKAGP VERVEKMIAT MKLKFPDPPH FILCILPERK TSDIYGPWKK ICLTEEGIHT QCICPIKISD QYLTNVLLKI NSKLGGINSL
601: LGIEYSYNIP LINKIPTLIL GMDVSHGPPG RADVPSVAAV VGSKCWPLIS RYRAAVRTQS PRLEMIDSLF QPIENTEKGD NGIMNELFVE FYRTSRARKP
701: KQIIIFRDGV SESQFEQVLK IEVDQIIKAY QRLGESDVPK FTVIVAQKNH HTKLFQAKGP ENVPAGTVVD TKIVHPTNYD FYMCAHAGKI GTSRPAHYHV
801: LLDEIGFSPD DLQNLIHSLS YVNQRSTTAT SIVAPVRYAH LAAAQVAQFT KFEGISEDGK VPELPRLHEN VEGNMFFC
Arabidopsis Description
AGO6Protein argonaute 6 [Source:UniProtKB/Swiss-Prot;Acc:O48771]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.