Factsheet for GSMUA_Achr9P22630_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plasma membrane 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0265600-01	Rice	cytosol, nucleus	24.67	71.52
KXG23356	Sorghum	nucleus	67.08	68.22
TraesCS5D01G169500.1	Wheat	cytosol	65.4	66.44
HORVU0Hr1G012490.1	Barley	nucleus	65.4	66.36
TraesCS5A01G165900.1	Wheat	cytosol	65.29	66.25
VIT_12s0059g01430.t01	Wine grape	nucleus	67.41	65.65
TraesCS5B01G162300.1	Wheat	mitochondrion	65.74	65.59
Zm00001d019905_P003	Maize	nucleus	66.63	64.82
GSMUA_Achr9P27810_001	Banana	plastid	62.61	64.41
CDY68123	Canola	cytosol, endoplasmic reticulum, nucleus	16.85	63.98
Bra022057.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid	15.4	63.89
Solyc07g049500.2.1	Tomato	nucleus	61.94	61.46
Bra022918.1-P	Field mustard	nucleus	58.82	60.78
CDX84712	Canola	nucleus	58.82	60.78
GSMUA_Achr9P05150_001	Banana	nucleus	62.05	60.77
CDX79495	Canola	nucleus	58.59	60.55
AT2G32940.1	Thale cress	nucleus	57.59	58.77
KRH20672	Soybean	nucleus	59.82	58.71
GSMUA_AchrUn_...	Banana	cytosol	8.71	39.8
GSMUA_Achr7P04100_001	Banana	extracellular	9.71	35.08
GSMUA_Achr6P05310_001	Banana	nucleus	33.71	32.54
GSMUA_Achr4P30720_001	Banana	nucleus	33.37	32.05
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	12.83	32.03
GSMUA_AchrUn_...	Banana	cytosol	10.83	31.91
GSMUA_Achr7P13220_001	Banana	cytosol	33.15	31.4
GSMUA_Achr1P17950_001	Banana	nucleus	35.6	30.24
GSMUA_Achr3P27070_001	Banana	nucleus	36.27	30.2
GSMUA_Achr1P07120_001	Banana	cytosol	35.6	30.18
GSMUA_Achr3P13970_001	Banana	nucleus	35.6	30.09
GSMUA_AchrUn_...	Banana	mitochondrion	35.38	29.79
GSMUA_Achr7P26400_001	Banana	cytosol	20.42	28.73
GSMUA_Achr6P04510_001	Banana	nucleus	33.82	24.49

Protein Annotations

MapMan:12.5.1.13	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSMUA_Achr9G22630_001	EnsemblPlants:GSMUA_Achr9P22630_001	EnsemblPlants:GSMUA_Achr9T22630_001
InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M0U2M2	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821
PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF65	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI000296EEB8
SEG:seg	:	:	:	:	:

Description

Protein argonaute 16 [Source:GMGC_GENE;Acc:GSMUA_Achr9G22630_001]

Coordinates

chr9:+:27732300..27739327

Molecular Weight (calculated)

101189.0 Da

IEP (calculated)

9.135

GRAVY (calculated)

-0.321

Length

896 amino acids

Sequence
(BLAST)

001: MVSLSGEIGI EGSSSSSQAM PESVLPTKAG TFDPPTRLPM ARPAFGTEGR PVQLLTNHFN VKFTKQDTVF YHYSVNISHD KSDENHAHSK GFGRKVLDRL
101: YQTYRSEFEG KQFAYDGEKS LFTVGPLPQN NFEFTVVLED SSARATGGDP SGDSLGEGDQ KRSRRSHFTR TFKVELSFAA KIPLKSIALA LRGGESEDAQ
201: HALQILDIIL RQQQAKRGCL LVKQSFFDGN HVNFIDLGGG VSGCRGFHSS FRTVMGGLSL NMDVSTTMII TPGPVLDFLL ANQNIQDRRR IDWVKAKRML
301: KNLRIMTRHT KMEFRITGLS EMPCNQQLFP LRVRNSHGET QIVDITVYDY FMKTHKMQLT WSAHMPCLDV GKPKRPNYLP IELCNLVSLQ QYTKALSSQQ
401: RVSLVEKSRQ KPLERIRVVT DAVKNNHYDE DPILRSCGIY IDKQLSKLDG RVLSAPTLKV GNEEDCVPRN GRWNFNQKRL FYPIQIDRLW AIVNFSARCD
501: LSYLSRELIN CGRNKGIQIK RPFTFFEEDR EWVRSDPVVR VEKMFEKIKA NLPEHPQFLL CVLPERKNSD IYGPWKKKNL HEVGIVTQCI SPTKINDQYL
601: TNVLLKINSK LGGINSLLAV EHPCRIPLVN EIPTMILGMD VCHGSPGPSD FPSIAAVVGS RHWPLISRYR ASVRTQSPKL ETIDSLYKPG ADGQDHGMIR
701: ELLLDFYRSS NAKKPTQMII FRDGVGESQF NEVLNVELNQ IIKAFEHLGE CTIPKFTVIV AQKNHHTKLF LAGAPENVPP GTVVDTMVVH PRHYDFYMCA
801: HAGMIGTSRP IHYNVLLDEI GFSTDDLQKL VLALSYVYQR STTAVSMVAP VCYAHLAAQQ MSQFLKFEDF SGAAGRQGVP ELPRLHDNVK SSMFFC

Best Arabidopsis Sequence Match ( AT2G27040.2 )
(BLAST)

001: MDSTNGNGAD LESANGANGS GVTEALPPPP PVIPPNVEPV RVKTELAEKK GPVRVPMARK GFGTRGQKIP LLTNHFKVDV ANLQGHFFHY SVALFYDDGR
101: PVEQKGVGRK ILDKVHQTYH SDLDGKEFAY DGEKTLFTYG ALPSNKMDFS VVLEEVSATR ANGNGSPNGN ESPSDGDRKR LRRPNRSKNF RVEISYAAKI
201: PLQALANAMR GQESENSQEA IRVLDIILRQ HAARQGCLLV RQSFFHNDPT NCEPVGGNIL GCRGFHSSFR TTQGGMSLNM DVTTTMIIKP GPVVDFLIAN
301: QNARDPYSID WSKAKRTLKN LRVKVSPSGQ EFKITGLSDK PCREQTFELK KRNPNENGEF ETTEVTVADY FRDTRHIDLQ YSADLPCINV GKPKRPTYIP
401: LELCALVPLQ RYTKALTTFQ RSALVEKSRQ KPQERMTVLS KALKVSNYDA EPLLRSCGIS ISSNFTQVEG RVLPAPKLKM GCGSETFPRN GRWNFNNKEF
501: VEPTKIQRWV VVNFSARCNV RQVVDDLIKI GGSKGIEIAS PFQVFEEGNQ FRRAPPMIRV ENMFKDIQSK LPGVPQFILC VLPDKKNSDL YGPWKKKNLT
601: EFGIVTQCMA PTRQPNDQYL TNLLLKINAK LGGLNSMLSV ERTPAFTVIS KVPTIILGMD VSHGSPGQSD VPSIAAVVSS REWPLISKYR ASVRTQPSKA
701: EMIESLVKKN GTEDDGIIKE LLVDFYTSSN KRKPEHIIIF RDGVSESQFN QVLNIELDQI IEACKLLDAN WNPKFLLLVA QKNHHTKFFQ PTSPENVPPG
801: TIIDNKICHP KNNDFYLCAH AGMIGTTRPT HYHVLYDEIG FSADELQELV HSLSYVYQRS TSAISVVAPI CYAHLAAAQL GTFMKFEDQS ETSSSHGGIT
901: APGPISVAQL PRLKDNVANS MFFC

Arabidopsis Description

AGO4Protein argonaute 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.