Factsheet for GSMUA_Achr7P13220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P05310_001	Banana	nucleus	80.55	82.11
GSMUA_Achr4P30720_001	Banana	nucleus	80.44	81.56
Os06t0597400-01	Rice	cytosol	79.92	77.22
TraesCS7D01G351700.1	Wheat	cytosol	77.7	77.21
Zm00001d036917_P009	Maize	nucleus	78.75	77.12
TraesCS7B01G256500.1	Wheat	cytosol	77.7	76.88
KXG20286	Sorghum	cytosol	79.39	76.55
TraesCS7A01G371200.2	Wheat	cytosol	77.7	76.4
Zm00001d046438_P003	Maize	cytosol	79.39	74.73
VIT_11s0016g04620.t01	Wine grape	cytosol	71.04	74.25
KRH03770	Soybean	nucleus	70.19	73.53
KRH63036	Soybean	cytosol	70.61	73.49
KRH54842	Soybean	nucleus	70.19	73.05
KRH56656	Soybean	cytosol	69.98	72.91
GSMUA_AchrUn_...	Banana	cytosol	14.8	71.43
Solyc12g006790.1.1	Tomato	nucleus	70.3	71.28
TraesCS6B01G206700.1	Wheat	plastid	70.82	70.68
TraesCS6D01G166300.1	Wheat	plastid	70.93	70.56
HORVU6Hr1G036840.2	Barley	plastid	70.72	70.5
TraesCS6A01G178100.2	Wheat	plastid	70.08	69.94
PGSC0003DMT400053301	Potato	nucleus	67.86	69.78
GSMUA_Achr7P04100_001	Banana	extracellular	17.65	67.34
GSMUA_Achr3P13970_001	Banana	nucleus	69.03	61.6
GSMUA_Achr1P17950_001	Banana	nucleus	68.29	61.23
GSMUA_AchrUn_...	Banana	mitochondrion	68.5	60.9
GSMUA_Achr1P07120_001	Banana	cytosol	66.28	59.32
GSMUA_Achr3P27070_001	Banana	nucleus	67.34	59.2
GSMUA_AchrUn_...	Banana	cytosol	17.12	53.29
GSMUA_Achr4P17670_001	Banana	extracellular, plasma membrane	17.34	45.68
GSMUA_Achr6P04510_001	Banana	nucleus	52.75	40.34
GSMUA_Achr7P26400_001	Banana	cytosol	24.84	36.89
GSMUA_Achr9P05150_001	Banana	nucleus	32.88	33.99
GSMUA_Achr9P22630_001	Banana	nucleus	31.4	33.15
GSMUA_Achr9P27810_001	Banana	plastid	30.44	33.07

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	InterPro:ArgoL1	InterPro:ArgoL2
InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	EnsemblPlantsGene:GSMUA_Achr7G13220_001	EnsemblPlants:GSMUA_Achr7P13220_001
EnsemblPlants:GSMUA_Achr7T13220_001	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	UniProt:M0TH59	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487
PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF45	InterPro:Piwi
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098
UniParc:UPI000295127C	:	:	:	:	:

Description

Protein argonaute PNH1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G13220_001]

Coordinates

chr7:-:10612033..10619409

Molecular Weight (calculated)

107107.0 Da

IEP (calculated)

9.060

GRAVY (calculated)

-0.300

Length

946 amino acids

Sequence
(BLAST)

001: MAKAPKGEKS FISKKPLQNC MNQQKLHGGC PLPEMKKNME RRRGRRKGKT DVDPATEIET GLSIGPPLSS KGIFFCRRPG FGQVGSRCIV KANHFLAELT
101: NKDLIQYDVT ITPEVSSRSM NRAIISELVR LYREIELGMK LPAYDGRKSL YTAGYLPFNS KEFVVKLVEE DGRIGIARSG SFLYLHASSR AEIYHLQQLI
201: AGRQTDAPQE ALQVLDIVLR ELSNQRYIPV GRSFYSPDIR KPQWLGDGLQ SWCGFYQSIR PTQMGLSLNI DMSSTAFIEP LPVMEFAAQI LGKDVLSKPL
301: SDAECIKIKK ALRGVKVEVT HRENVRRKYR ISGLTSQPTR ELIMCYTHSS RLFICGIILY QFDEQMNMKS VVEYFKEMYG FTIQHSHLPC LQVGNQKKAN
401: YLPMEACKIV EGQRYTKRLN DKQITSLLKV TCQRPREQEK DILQVYCLLV YVQIIQNEYE QDPYANEFGI NVSSKLTLVE ARVLPAPWLK YHDTGKEKQC
501: LPHVGQWNMM NKKVINGCTI NHWACINFSR GVQENTAFGF CQELAQMCQI SGMKFNCEPV IPVYSAKPEQ VEKALKHVYS AAMNKLKGKE LELLIAILPD
601: NNGSLYGDLK RICETDLGLI SQCCLTKHVF KTGKQYLANV SLKINVKMGG RNTVLLDAIS WRIPLVSDIP TIIFGADVTH PETGEDSGPS IAAVVASQDW
701: PEVTKYAGLV CAQAHRQELI QDLFKTWNDP QRGTVTGGMI RELLISFRKA TGQKPLRIIF YRDGVSEGQF YQVLLHEVDA IRKACASLEP NYQPPVTFVV
801: VQKRHHTRLF ANNHKDRSST DKSGNILPGT VVDSKICHPT EFDFYLCSHS GIQGTSRPAH YHVLWDENNF TADEMQILTN NLCYTYARCT RSVSVVPPAY
901: YAHLAAFRAR FYMDPNISEN SPTPTMGSVK PLPALKEKVK QVMFYC

Best Arabidopsis Sequence Match ( AT5G43810.3 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.