Factsheet for Os06t0597400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

cytosol: 12000455

plasma membrane: 27800704

gfp PMID: 12000455

A Nishimura, M Ito, N Kamiya, Y Sato, M Matsuoka

BioScience Centre, Nagoya University, Nagoya 464-8601, Japan.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036917_P009	Maize	nucleus	90.7	91.93
KXG20286	Sorghum	cytosol	91.93	91.74
TraesCS7D01G351700.1	Wheat	cytosol	88.36	90.86
TraesCS7B01G256500.1	Wheat	cytosol	88.46	90.59
TraesCS7A01G371200.2	Wheat	cytosol	88.66	90.23
Zm00001d046438_P003	Maize	cytosol	91.42	89.05
GSMUA_Achr6P05310_001	Banana	nucleus	80.69	85.13
GSMUA_Achr4P30720_001	Banana	nucleus	80.18	84.14
GSMUA_Achr7P13220_001	Banana	cytosol	77.22	79.92
VIT_11s0016g04620.t01	Wine grape	cytosol	70.28	76.02
KRH63036	Soybean	cytosol	70.17	75.58
KRH54842	Soybean	nucleus	69.77	75.14
KRH03770	Soybean	nucleus	69.05	74.86
KRH56656	Soybean	cytosol	69.15	74.56
Solyc12g006790.1.1	Tomato	nucleus	69.05	72.45
PGSC0003DMT400053301	Potato	nucleus	67.21	71.52
Os02t0831600-01	Rice	extracellular	65.58	63.5
Os04t0566500-04	Rice	nucleus	69.77	62.03
Os02t0672200-01	Rice	cytosol	68.54	62.01
Os03t0682200-00	Rice	nucleus	29.21	61.51
Os06t0729300-01	Rice	nucleus	64.76	61.08
Os03t0682600-00	Rice	nucleus	40.35	52.88
Os02t0169400-01	Rice	nucleus	45.86	51.26
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	23.8	50.98
Os07t0471300-01	Rice	nucleus	38.0	50.07
Os03t0800200-01	Rice	plasma membrane	52.91	48.96
Os07t0188000-01	Rice	nucleus	49.85	46.39
Os07t0265600-01	Rice	cytosol, nucleus	14.61	46.28
Os02t0616300-00	Rice	vacuole	11.85	35.05
Os04t0151800-02	Rice	nucleus	32.58	35.02
Os01t0275600-01	Rice	nucleus	32.18	34.85
Os03t0449200-00	Rice	nucleus	35.04	32.73
Os01t0275200-00	Rice	golgi, peroxisome, plastid	14.5	30.41
Os04t0615700-01	Rice	nucleus, plasma membrane	31.15	29.5
Os03t0789500-01	Rice	cytosol	0.61	2.64
Os04t0615800-01	Rice	nucleus	0.2	0.38

Protein Annotations

MapMan:16.10.3	Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	EntrezGene:9269490	EMBL:AB081950
EMBL:AP014962	InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_Mid_dom	InterPro:Argonaute_N	ProteinID:BAD33046.1
ProteinID:BAF19902.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412
GO:GO:0006413	GO:GO:0007275	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	GO:GO:0019827	GO:GO:0031047	GO:GO:0048366	InterPro:IPR003100
InterPro:IPR003165	InterPro:IPR036397	EnsemblPlantsGene:Os06g0597400	EnsemblPlants:Os06t0597400-01	InterPro:PAZ_dom	InterPro:PAZ_dom_sf
PFAM:PF02170	PFAM:PF02171	PFAM:PF08699	PFAM:PF16486	PFAM:PF16487	PFAM:PF16488
PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891	PANTHER:PTHR22891:SF45	InterPro:Piwi	UniProt:Q69VD5
InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00949	SMART:SM00950	SMART:SM01163	SUPFAM:SSF101690
SUPFAM:SSF53098	UniParc:UPI00003FF2EE	RefSeq:XP_015643801.1	RefSeq:XP_015643802.1	SEG:seg	:

Description

PINHEAD 1PINHEAD/ZWILLE (PNH/ZLL) homologous protein, Shoot apical meristem (SAM) maintenance and leaf development (Os06t0597400-01)

Coordinates

chr6:+:23540501..23547137

Molecular Weight (calculated)

108425.0 Da

IEP (calculated)

9.559

GRAVY (calculated)

-0.371

Length

979 amino acids

Sequence
(BLAST)

001: MLEVLDMAPP RHQPAAGKAG GGRGHGHGHG HGGGGGGPAA RKQPLQSSMA QPKAETAAAT AAVAPPEGGK KCGGGGGRRR GGRGRGGRAG AGPGPGLAAA
101: PAVVVAPAAR AVIGPPVASK GLSFCRRPGF GTVGARCVVK ANHFLAELPD KDLTQYDVKI TPEVSSRSVN RAIMSELVRL YHDSDLGGRL PAYDGRKNLY
201: TAGTLPFDAR EFVVRLTDDD DGTGVPPRER EYRVAIKFAA RADLHHLRQF IAGRQADAPQ EALQVLDIVL RELANRRYVS IGRSFYSPDI RKPQRLGDGL
301: QSWCGFYQSI RPTQMGLSLN IDMSSTAFIE PLPVIEFVAQ ILGKDVISRP LSDANRIKIK KALRGVKVEV THRGNVRRKY RISGLTTQPT HELIFPIDDQ
401: MNMKSVVEYF KEMYGFTIQH PHLPCLQVGN QKKANYLPME ACKIVEGQRY TKRLNEKQIT SLLKVTCRRP REQEMDILQT VQQNGYEQDP YAKEFGINIS
501: EKLTSVEARV LPAPWLKYHD TGKEKECLPQ VGQWNMVNKK VINGCKVNHW ACINFSRSVQ ETTARGFCQE LAQMCQISGM EFNSEPVIPI YSARPDQVEK
601: ALKHVYNMSL NKLKGKELEL LLAILPDNNG SLYGDIKRIC ETDLGLISQC CLTKHVFKIS KQYLANVSLK INVKMGGRNT VLLDAISWRI PLVSDIPTII
701: FGADVTHPET GEDSSPSIAA VVASQDWPEV TKYAGLVCAQ AHRQELIQDL YKTWHDPQRG TVTGGMIREL LISFRKATGQ KPLRIIFYRD GVSEGQFYQV
801: LLYELDAIRK ACASLEPNYQ PPVTFVVVQK RHHTRLFANN HKDRSSTDKS GNILPGTVVD SKICHPSEFD FYLCSHAGIQ GTSRPAHYHV LWDENNFTAD
901: EMQTLTNNLC YTYARCTRSV SVVPPAYYAH LAAFRARFYM EPEMSENQTT SKSSTGTNGT SVKPLPAVKE KVKRVMFYC

Best Arabidopsis Sequence Match ( AT5G43810.3 )
(BLAST)

001: MPIRQMKDSS ETHLVIKTQP LKHHNPKTVQ NGKIPPPSPS PVTVTTPATV TQSQASSPSP PSKNRSRRRN RGGRKSDQGD VCMRPSSRPR KPPPPSQTTS
101: SAVSVATAGE IVAVNHQMQM GVRKNSNFAP RPGFGTLGTK CIVKANHFLA DLPTKDLNQY DVTITPEVSS KSVNRAIIAE LVRLYKESDL GRRLPAYDGR
201: KSLYTAGELP FTWKEFSVKI VDEDDGIING PKRERSYKVA IKFVARANMH HLGEFLAGKR ADCPQEAVQI LDIVLRELSV KRFCPVGRSF FSPDIKTPQR
301: LGEGLESWCG FYQSIRPTQM GLSLNIDMAS AAFIEPLPVI EFVAQLLGKD VLSKPLSDSD RVKIKKGLRG VKVEVTHRAN VRRKYRVAGL TTQPTRELMF
401: PVDENCTMKS VIEYFQEMYG FTIQHTHLPC LQVGNQKKAS YLPMEACKIV EGQRYTKRLN EKQITALLKV TCQRPRDREN DILRTVQHNA YDQDPYAKEF
501: GMNISEKLAS VEARILPAPW LKYHENGKEK DCLPQVGQWN MMNKKMINGM TVSRWACVNF SRSVQENVAR GFCNELGQMC EVSGMEFNPE PVIPIYSARP
601: DQVEKALKHV YHTSMNKTKG KELELLLAIL PDNNGSLYGD LKRICETELG LISQCCLTKH VFKISKQYLA NVSLKINVKM GGRNTVLVDA ISCRIPLVSD
701: IPTIIFGADV THPENGEESS PSIAAVVASQ DWPEVTKYAG LVCAQAHRQE LIQDLYKTWQ DPVRGTVSGG MIRDLLISFR KATGQKPLRI IFYRDGVSEG
801: QFYQVLLYEL DAIRKACASL EPNYQPPVTF IVVQKRHHTR LFANNHRDKN STDRSGNILP GTVVDTKICH PTEFDFYLCS HAGIQGTSRP AHYHVLWDEN
901: NFTADGIQSL TNNLCYTYAR CTRSVSIVPP AYYAHLAAFR ARFYLEPEIM QDNGSPGKKN TKTTTVGDVG VKPLPALKEN VKRVMFYC

Arabidopsis Description

AGO10Protein argonaute 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9XGW1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.