Factsheet for Os02t0169400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
plasma membrane 1
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99173	Soybean	cytosol	11.99	67.31
TraesCS2A01G258200.1	Wheat	cytosol	39.5	51.95
VIT_19s0014g01840.t01	Wine grape	cytosol, nucleus, plastid	44.52	50.19
Os03t0682200-00	Rice	nucleus	25.68	48.39
TraesCS1D01G151300.3	Wheat	plastid	46.35	47.82
Solyc03g098280.2.1	Tomato	nucleus	53.2	47.55
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	46.0	47.47
TraesCS2A01G258100.1	Wheat	mitochondrion	46.0	46.0
CDY04311	Canola	cytosol, nucleus, plastid	51.37	45.92
Os06t0597400-01	Rice	cytosol	51.26	45.86
Os02t0831600-01	Rice	extracellular	52.63	45.6
Os02t0672200-01	Rice	cytosol	55.82	45.19
Solyc06g072300.2.1	Tomato	nucleus	54.11	44.97
PGSC0003DMT400069313	Potato	cytosol	54.0	44.88
CDY41831	Canola	nucleus	52.97	44.44
Os04t0566500-04	Rice	nucleus	55.82	44.41
CDY68174	Canola	nucleus	53.2	44.3
Os06t0729300-01	Rice	nucleus	52.05	43.93
VIT_17s0053g00680.t01	Wine grape	nucleus	54.11	43.69
AT1G48410.2	Thale cress	nucleus	52.17	43.52
Bra014136.1-P	Field mustard	nucleus	53.2	43.19
Bra032254.1-P	Field mustard	nucleus	52.85	41.67
CDY23683	Canola	cytosol, nucleus, plastid	51.48	41.53
PGSC0003DMT400079716	Potato	nucleus	52.97	41.17
Os03t0682600-00	Rice	nucleus	34.93	40.96
Os03t0789466-00	Rice	cytosol, mitochondrion, nucleus	21.23	40.7
Os07t0471300-01	Rice	nucleus	33.56	39.57
Os07t0265600-01	Rice	cytosol, nucleus	13.58	38.51
Os03t0800200-01	Rice	plasma membrane	43.61	36.11
Os07t0188000-01	Rice	nucleus	41.78	34.79
Os01t0275600-01	Rice	nucleus	30.14	29.2
Os04t0151800-02	Rice	nucleus	30.37	29.2
Os02t0616300-00	Rice	vacuole	10.62	28.1
Os03t0449200-00	Rice	nucleus	29.79	24.9
Os01t0275200-00	Rice	golgi, peroxisome, plastid	13.01	24.41
Os04t0615700-01	Rice	nucleus, plasma membrane	28.08	23.79
Os03t0789500-01	Rice	cytosol	0.57	2.2
Os04t0615800-01	Rice	nucleus	0.34	0.57

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	EntrezGene:4328436	EMBL:AK106247
InterPro:ArgoL1	InterPro:ArgoL2	InterPro:Argonaute_N	ProteinID:BAD25174.1	ProteinID:BAD25726.1	ProteinID:BAF07935.1
ProteinID:BAS77186.1	ProteinID:EEE56394.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0031047	InterPro:IPR003100	InterPro:IPR003165
InterPro:IPR036397	EnsemblPlantsGene:Os02g0169400	EnsemblPlants:Os02t0169400-01	InterPro:PAZ_dom	InterPro:PAZ_dom_sf	PFAM:PF02171
PFAM:PF08699	PFAM:PF16486	PFAM:PF16488	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF102	InterPro:Piwi	UniProt:Q6H6C3	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950
SMART:SM01163	SUPFAM:SSF101690	SUPFAM:SSF53098	UniParc:UPI00003B4397	RefSeq:XP_015624008.1	SEG:seg

Description

ARGONAUTE 17Similar to Argonaute 4 protein. (Os02t0169400-01)

Coordinates

chr2:-:3748511..3755492

Molecular Weight (calculated)

98917.5 Da

IEP (calculated)

8.759

GRAVY (calculated)

-0.235

Length

876 amino acids

Sequence
(BLAST)

001: MESQRMTWLY DRHHSLKHNK AERQAILSTY RLAKRPNLSS EGMIGESCIV RTNCFSVHLE SLDDQTIYEY DVCVTPEVGI NRAVIRELVK QQKDSGLGGR
101: LPAYDGRKRL YTSGPLPFDS HRFLVLLDSI EDSPEESRHL RVRDFVVTLK FAAKISLWTL RKFRGGKPNR ESRAALRALD VVLKELPTAR YTQFAGSFYS
201: PNLGECRQLC KVLESWRGFH QRIQATQMGL QLNIDVSSSV FIKPVPVVDY VAQLLNEDIL LDRPLCSTEF LKIKEALEGL KVQINGILFN TYHVQDLVHQ
301: AASFPVNFSI QYPSLPCLKV AHFGETIFLP LEVCKIAEGQ CHQKQLNAKH MAALLQVARQ PPNERDYNIL QTVHQNKYQE DPHAKEFGIK IEEKLVSIKS
401: RILPAPWLKF HDSGETTEFL PQLGIWNMMH KKMINGGRVK SWACVNFCWS VREYAARNFC YDLGFMCRES GMVFSVKPVL PLVIAKPGCV ESALRTLHDD
501: VMDILRPQGR KLDLLIVILP NNNGSLYGDV KRICETDIGL ISQCCLAKHV LKMNKWYLAS VALKINAKMG GRNTVLVDAL EMRLPHVRDT PTIVFGAHVT
601: HPHPGKANSS SIAAVVASQD WPEVTKYAGL ISVQACHQES IQGLFKVQDD PERGTTTSGM IKEHLMSFYR ATKRKPGRII FYRDGVSKGQ LPQALMHELG
701: AIKMACASMG PDYNPLVTYV VLQKCRHTRL FADYYNANTH DSTANIRAGT VVDSNICQPN QFDFYLCSHR STQGTKRPRY YHVLWDENDF LAGSFQELTN
801: YLCYTSATCT QSISVVAPVH YARLLSSRAR CYIKPRSIGD STSHTSLPSE EDSSAASETG SLLPIKDNLK GAMFFC

Best Arabidopsis Sequence Match ( AT1G48410.1 )
(BLAST)

0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC

Arabidopsis Description

AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.