Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G151300.3 | Wheat | plastid | 97.76 | 97.76 |
| TraesCS2A01G258200.1 | Wheat | cytosol | 49.94 | 63.66 |
| KRG99173 | Soybean | cytosol | 11.66 | 63.46 |
| TraesCS2A01G258100.1 | Wheat | mitochondrion | 60.66 | 58.79 |
| TraesCS3B01G027100.1 | Wheat | cytosol | 9.31 | 51.63 |
| TraesCS4B01G026600.1 | Wheat | cytosol | 29.09 | 50.93 |
| VIT_19s0014g01840.t01 | Wine grape | cytosol, nucleus, plastid | 45.47 | 49.68 |
| Solyc03g098280.2.1 | Tomato | nucleus | 54.89 | 47.55 |
| TraesCS7B01G256500.1 | Wheat | cytosol | 51.94 | 46.13 |
| Os02t0169400-01 | Rice | nucleus | 47.47 | 46.0 |
| CDY04311 | Canola | cytosol, nucleus, plastid | 52.77 | 45.71 |
| Solyc06g072300.2.1 | Tomato | nucleus | 56.3 | 45.35 |
| PGSC0003DMT400069313 | Potato | cytosol | 56.07 | 45.16 |
| TraesCS6B01G206700.1 | Wheat | plastid | 50.06 | 44.83 |
| CDY41831 | Canola | nucleus | 55.12 | 44.83 |
| TraesCS6B01G466700.1 | Wheat | nucleus | 53.36 | 44.72 |
| CDY68174 | Canola | nucleus | 55.12 | 44.49 |
| AT1G48410.2 | Thale cress | nucleus | 54.89 | 44.38 |
| TraesCS2B01G421000.2 | Wheat | nucleus | 57.6 | 44.37 |
| VIT_17s0053g00680.t01 | Wine grape | nucleus | 56.42 | 44.15 |
| TraesCS6B01G270900.1 | Wheat | nucleus | 56.3 | 44.06 |
| Bra014136.1-P | Field mustard | nucleus | 55.24 | 43.47 |
| TraesCS3B01G135800.1 | Wheat | cytosol | 42.52 | 42.93 |
| TraesCS7B01G482100.1 | Wheat | nucleus | 51.94 | 42.73 |
| TraesCS5B01G468000.1 | Wheat | plastid | 43.7 | 42.5 |
| PGSC0003DMT400079716 | Potato | nucleus | 56.18 | 42.32 |
| Bra032254.1-P | Field mustard | nucleus | 54.89 | 41.94 |
| CDY23683 | Canola | cytosol, nucleus, plastid | 53.47 | 41.8 |
| TraesCS5B01G454200.1 | Wheat | cytosol | 32.74 | 41.19 |
| TraesCS3B01G287600.1 | Wheat | nucleus | 43.46 | 40.73 |
| TraesCS5B01G452500.1 | Wheat | nucleus | 41.81 | 38.93 |
| TraesCS2B01G195200.2 | Wheat | nucleus | 44.52 | 37.5 |
| TraesCS5B01G451400.2 | Wheat | plastid | 46.76 | 37.45 |
| TraesCS5B01G455700.1 | Wheat | cytosol, mitochondrion, plastid | 43.11 | 37.16 |
| TraesCS4B01G024000.1 | Wheat | nucleus | 43.58 | 36.13 |
| TraesCS5B01G458100.1 | Wheat | cytosol | 34.98 | 31.26 |
| TraesCS7B01G437900.1 | Wheat | cytosol | 28.74 | 30.24 |
| TraesCS7B01G437700.1 | Wheat | nucleus | 30.51 | 29.47 |
| TraesCS7B01G450300.1 | Wheat | nucleus | 31.21 | 28.84 |
| TraesCS1B01G480100.1 | Wheat | nucleus | 31.33 | 28.69 |
| TraesCS5B01G162300.1 | Wheat | mitochondrion | 29.92 | 28.29 |
| TraesCS7B01G450200.2 | Wheat | nucleus | 30.51 | 27.97 |
| TraesCS3B01G217300.2 | Wheat | golgi, nucleus, unclear | 31.1 | 27.97 |
| TraesCS7B01G373400.1 | Wheat | nucleus | 25.09 | 27.1 |
| TraesCS2B01G434000.1 | Wheat | nucleus | 32.74 | 26.48 |
| TraesCS2B01G438600.1 | Wheat | cytosol, nucleus, plastid | 24.62 | 26.03 |
| TraesCS2B01G439000.2 | Wheat | nucleus, unclear | 29.33 | 23.8 |
| TraesCS2B01G438200.1 | Wheat | nucleus | 27.56 | 21.89 |
Protein Annotations
| Gene3D:2.170.260.10 | Gene3D:3.30.420.10 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:ArgoL1 | InterPro:ArgoL2 |
| InterPro:Argonaute_Mid_dom | InterPro:Argonaute_N | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR003100 | InterPro:IPR003165 | InterPro:IPR036397 | InterPro:PAZ_dom | InterPro:PAZ_dom_sf | PFAM:PF02170 |
| PFAM:PF02171 | PFAM:PF08699 | PFAM:PF16486 | PFAM:PF16487 | PFAM:PF16488 | PFscan:PS50821 |
| PFscan:PS50822 | PFscan:PS51257 | PANTHER:PTHR22891 | PANTHER:PTHR22891:SF102 | InterPro:Piwi | InterPro:RNaseH-like_sf |
| InterPro:RNaseH_sf | SMART:SM00950 | SMART:SM01163 | SUPFAM:SSF101690 | SUPFAM:SSF53098 | EnsemblPlantsGene:TraesCS5B01G116900 |
| EnsemblPlants:TraesCS5B01G116900.5 | TIGR:cd02846 | TIGR:cd04657 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5B:+:203503449..203513090
Molecular Weight (calculated)
95100.7 Da
IEP (calculated)
9.161
GRAVY (calculated)
-0.198
Length
849 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRKNKNRHS SGGRGGRIGS GPSSTVSCSI PELQKFVPGE SLKRPGFVSA GESYIVKANH FKLTYNETLC RYHVLIDPKP TSAGDVMIQL AKLYGQSRLG
101: GRLPAYDGKK SLYTSRPFPF TCEAFKVTLP DQENILCGLP RGKRHFRVQI TLDKVLFGRI DGEEFYQAFN TILHELFLGR YCLVGRSFYK SQPGEGLKNC
201: CGFYQTIQNT QMGISLNIDI SCKPFINPLP VINLVALLLN RDISDDPFDF CERLKVSKDL CDVEVNFTLE KNADKKYRIT GLTSQGSSQL PCPCDDSGTG
301: KTVLEYFKET YRCTIRSRVP CLKVRDQEKP TTYLPMEVCE ISDAKQISYL LSVACQHPMD REKTILQTVN PYNEDPYAKE FGITFENKLT IVKGRVLPPP
401: VLKFNDQGKV KEFLPKVGKW NMRLKQMVKG GEVNTWACIN FASDITHAAA VAFCDELAVT CLISGMNFKG DPVLPLVNAK PNHVRPFLKK HYQRFMAILR
501: PLHKELDLLI VILPDKNGTL YGDIKRICET DLGLVSQCCL AKHVLKMKPQ YLTNIALKIN MKVGGRNTVL LDAVVGNLPR VSNTPTIIFG ADVSHPHHGE
601: GRSSPSIAAV VASQDWPEVT NYAGLVRRQA RHEEIIQGLF NENDCGSGRI SGGMIKEHLI SFMRSTGHIP RRIIFYRDVV SKGRLNMVIE HELSAIKKAC
701: ASLDPIYNPQ VTIIMVQKQH HTRLFAGNYG VGSTIFESGN VLPGTVVDKE ICHPTDFDFY LCSHAGTKGV SRPVRYHVLW DENNFMANAL LILTNHLCYT
801: DARCTSSVSI VPPVHYAHLL ASRARLYIGY KGNLPDIKDN VKKRGMFFC
101: GRLPAYDGKK SLYTSRPFPF TCEAFKVTLP DQENILCGLP RGKRHFRVQI TLDKVLFGRI DGEEFYQAFN TILHELFLGR YCLVGRSFYK SQPGEGLKNC
201: CGFYQTIQNT QMGISLNIDI SCKPFINPLP VINLVALLLN RDISDDPFDF CERLKVSKDL CDVEVNFTLE KNADKKYRIT GLTSQGSSQL PCPCDDSGTG
301: KTVLEYFKET YRCTIRSRVP CLKVRDQEKP TTYLPMEVCE ISDAKQISYL LSVACQHPMD REKTILQTVN PYNEDPYAKE FGITFENKLT IVKGRVLPPP
401: VLKFNDQGKV KEFLPKVGKW NMRLKQMVKG GEVNTWACIN FASDITHAAA VAFCDELAVT CLISGMNFKG DPVLPLVNAK PNHVRPFLKK HYQRFMAILR
501: PLHKELDLLI VILPDKNGTL YGDIKRICET DLGLVSQCCL AKHVLKMKPQ YLTNIALKIN MKVGGRNTVL LDAVVGNLPR VSNTPTIIFG ADVSHPHHGE
601: GRSSPSIAAV VASQDWPEVT NYAGLVRRQA RHEEIIQGLF NENDCGSGRI SGGMIKEHLI SFMRSTGHIP RRIIFYRDVV SKGRLNMVIE HELSAIKKAC
701: ASLDPIYNPQ VTIIMVQKQH HTRLFAGNYG VGSTIFESGN VLPGTVVDKE ICHPTDFDFY LCSHAGTKGV SRPVRYHVLW DENNFMANAL LILTNHLCYT
801: DARCTSSVSI VPPVHYAHLL ASRARLYIGY KGNLPDIKDN VKKRGMFFC
0001: MVRKRRTDAP SEGGEGSGSR EAGPVSGGGR GSQRGGFQQG GGQHQGGRGY TPQPQQGGRG GRGYGQPPQQ QQQYGGPQEY QGRGRGGPPH QGGRGGYGGG
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
0101: RGGGPSSGPP QRQSVPELHQ ATSPTYQAVS SQPTLSEVSP TQVPEPTVLA QQFEQLSVEQ GAPSQAIQPI PSSSKAFKFP MRPGKGQSGK RCIVKANHFF
0201: AELPDKDLHH YDVTITPEVT SRGVNRAVMK QLVDNYRDSH LGSRLPAYDG RKSLYTAGPL PFNSKEFRIN LLDEEVGAGG QRREREFKVV IKLVARADLH
0301: HLGMFLEGKQ SDAPQEALQV LDIVLRELPT SRYIPVGRSF YSPDIGKKQS LGDGLESWRG FYQSIRPTQM GLSLNIDMSS TAFIEANPVI QFVCDLLNRD
0401: ISSRPLSDAD RVKIKKALRG VKVEVTHRGN MRRKYRISGL TAVATRELTF PVDERNTQKS VVEYFHETYG FRIQHTQLPC LQVGNSNRPN YLPMEVCKIV
0501: EGQRYSKRLN ERQITALLKV TCQRPIDREK DILQTVQLND YAKDNYAQEF GIKISTSLAS VEARILPPPW LKYHESGREG TCLPQVGQWN MMNKKMINGG
0601: TVNNWICINF SRQVQDNLAR TFCQELAQMC YVSGMAFNPE PVLPPVSARP EQVEKVLKTR YHDATSKLSQ GKEIDLLIVI LPDNNGSLYG DLKRICETEL
0701: GIVSQCCLTK HVFKMSKQYM ANVALKINVK VGGRNTVLVD ALSRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS QDWPEITKYA GLVCAQAHRQ
0801: ELIQDLFKEW KDPQKGVVTG GMIKELLIAF RRSTGHKPLR IIFYRDGVSE GQFYQVLLYE LDAIRKACAS LEAGYQPPVT FVVVQKRHHT RLFAQNHNDR
0901: HSVDRSGNIL PGTVVDSKIC HPTEFDFYLC SHAGIQGTSR PAHYHVLWDE NNFTADGLQS LTNNLCYTYA RCTRSVSIVP PAYYAHLAAF RARFYMEPET
1001: SDSGSMASGS MARGGGMAGR STRGPNVNAA VRPLPALKEN VKRVMFYC
Arabidopsis Description
AGO1ICU9 [Source:UniProtKB/TrEMBL;Acc:A0A178WL72]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.