Factsheet for TraesCS2B01G438600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G419800.2	Wheat	nucleus	74.72	85.11
HORVU2Hr1G098620.2	Barley	nucleus	81.69	64.38
TraesCS2B01G438200.1	Wheat	nucleus	63.51	47.71
TraesCS2B01G439000.2	Wheat	nucleus, unclear	54.05	41.49
KRH36727	Soybean	nucleus	22.91	40.62
PGSC0003DMT400054667	Potato	cytosol	32.88	36.16
TraesCS3B01G027100.1	Wheat	cytosol	6.72	35.29
TraesCS4B01G026600.1	Wheat	cytosol	20.42	33.81
CDY70429	Canola	plastid	36.49	33.03
KRG89432	Soybean	nucleus	39.35	32.71
VIT_10s0042g01180.t01	Wine grape	nucleus, plastid	37.36	31.65
VIT_10s0042g01150.t01	Wine grape	nucleus	38.23	31.36
VIT_10s0042g01200.t01	Wine grape	nucleus	37.98	30.68
Solyc02g069270.2.1	Tomato	cytosol	36.61	30.09
AT1G31280.1	Thale cress	nucleus	36.74	29.09
KRH11732	Soybean	nucleus	37.48	29.03
CDY02373	Canola	nucleus	36.49	28.64
Solyc02g069280.2.1	Tomato	nucleus	35.62	28.63
Bra023172.1-P	Field mustard	nucleus	36.86	28.54
Bra040815.1-P	Field mustard	cytosol	35.87	28.54
CDY25885	Canola	cytosol	35.87	28.51
Solyc02g069260.2.1	Tomato	nucleus	36.86	28.41
PGSC0003DMT400054669	Potato	cytosol	36.99	28.26
CDY55876	Canola	cytosol	35.49	27.54
TraesCS3B01G135800.1	Wheat	cytosol	27.77	26.52
PGSC0003DMT400054661	Potato	nucleus	32.01	26.22
TraesCS5B01G468000.1	Wheat	plastid	28.39	26.12
TraesCS5B01G116900.5	Wheat	cytosol, mitochondrion, nucleus, plastid	26.03	24.62
TraesCS7B01G256500.1	Wheat	cytosol	29.02	24.37
TraesCS5B01G454200.1	Wheat	cytosol	20.42	24.3
TraesCS3B01G287600.1	Wheat	nucleus	27.15	24.06
TraesCS6B01G206700.1	Wheat	plastid	28.39	24.05
TraesCS7B01G482100.1	Wheat	nucleus	30.64	23.84
TraesCS7B01G437900.1	Wheat	cytosol	23.91	23.79
TraesCS5B01G162300.1	Wheat	mitochondrion	26.15	23.39
TraesCS6B01G466700.1	Wheat	nucleus	29.27	23.2
TraesCS5B01G452500.1	Wheat	nucleus	26.28	23.14
AT1G31290.1	Thale cress	nucleus	34.37	23.12
TraesCS4B01G024000.1	Wheat	nucleus	29.39	23.05
TraesCS2B01G434000.1	Wheat	nucleus	29.76	22.76
TraesCS1B01G480100.1	Wheat	nucleus	26.03	22.55
TraesCS3B01G217300.2	Wheat	golgi, nucleus, unclear	26.28	22.35
TraesCS2B01G195200.2	Wheat	nucleus	27.9	22.22
TraesCS7B01G450300.1	Wheat	nucleus	25.28	22.09
TraesCS7B01G437700.1	Wheat	nucleus	24.16	22.07
TraesCS5B01G451400.2	Wheat	plastid	28.52	21.6
TraesCS5B01G455700.1	Wheat	cytosol, mitochondrion, plastid	26.28	21.42
TraesCS2B01G421000.2	Wheat	nucleus	29.39	21.42
TraesCS6B01G270900.1	Wheat	nucleus	28.14	20.83
TraesCS7B01G373400.1	Wheat	nucleus	20.05	20.48
TraesCS7B01G450200.2	Wheat	nucleus	23.54	20.41
TraesCS5B01G458100.1	Wheat	cytosol	23.16	19.58

Protein Annotations

Gene3D:2.170.260.10	Gene3D:3.30.420.10	Gene3D:3.40.50.2300	MapMan:35.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005515	InterPro:IPR003100	InterPro:IPR003165	InterPro:IPR036397	InterPro:PAZ_dom
InterPro:PAZ_dom_sf	PFAM:PF02170	PFAM:PF02171	PFscan:PS50821	PFscan:PS50822	PANTHER:PTHR22891
PANTHER:PTHR22891:SF4	InterPro:Piwi	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf	SMART:SM00950	SUPFAM:SSF101690
SUPFAM:SSF53098	EnsemblPlantsGene:TraesCS2B01G438600	EnsemblPlants:TraesCS2B01G438600.1	TIGR:cd02846	TIGR:cd04657	SEG:seg

Description

No Description!

Coordinates

chr2B:-:631101739..631104568

Molecular Weight (calculated)

90054.0 Da

IEP (calculated)

8.964

GRAVY (calculated)

-0.412

Length

803 amino acids

Sequence
(BLAST)

001: MAKLLEILAR PPYSLAAASD GKGHLFTFAK LPQSVYPVEV RSRTYNASAV LKPDLQLRLP LRPPVTKGIL PALDAIVREA SSSGKIIIGQ TFYSQQQRPK
101: ISSHGAFTTE ALEGTMQTLK ATEQGLVLCV DYSVMEFCRD GSKVLDLVKH LVKRFDTDIP FDMETALDQK QRKYLESKLK GLCITVNYLK KSSKGKDNGT
201: RIRKYKVQGL TAQPAQLITF QDFDSGEPLK LVEHYGKEHG VAIRYKMLPC LDLSTKHGRP NYIPIELCSL HQRQKYPKDN TLKGSNLKPR DKPPESNARK
301: DMILDMVKPP EGPCSGSRGE QFNITLNREM TEVTGTILAP PTLTLGSSNG RCKYDIRKKN CQWNLMNWMK LVDGKVLKCW GILDFSATPS HSGQERLHGN
401: KFIENIVNKC VHLGIQMQRE GCFVRCSAMS VLSDPGKLRE ELIQVKKDAE EHTQKKLQLL FCPMSEQHRG YKVLKMICET ELGIQTQCLL SHLANKGDGQ
501: DQYLSNLVLK INIKLGGSNM QLSDQLPKVT GSRFMFIGAD VNHPPPGDTE SLSIAAVVAS MDCPSASQYV PRIRAQKGGK EEIVNLGTMC KELIQVYKER
601: NDGFKPDKII YFRDGVSDEQ FRTVLDKELV SMKEGICEDG YSPTITVIVA KKRHHTRLFP NDRKELRTDN GNVLPGTVVD TTVVDGSHDD FFLCSHDGLH
701: GTSRPTHYYM LKDDHGFERV DLHKLVYSMC FMFARCTKPV SLTAPIKYAD TVAYRGRDYY DNRMVSQRPP SGPSSSASVP AGAPLFLDMP EVHADLKDSM
801: FFI

Best Arabidopsis Sequence Match ( AT1G31280.1 )
(BLAST)

0001: MERGGYRGGR GDGRGRGGRG YGGGGGGGEQ GRDRGYGGGE QGRGRGSERG GGNRGQGRGE QQDFRSQSQR GPPPGHGGRG TTQFQQPRPQ VAPQPSQAPA
0101: SYAGSVGGVA GRGAWGRKPQ VPSDSASPST STTVVSEPVR VAEVMNLKPS VQVATSDRKE PMKRPDRGGV VAVRRVNLYV NHYKVNFNPE SVIRHYDVEI
0201: KGEIPTKKVS RFELAMVRDK VFTDNPDEFP LAMTAYDGQK NIFSAVELPT GSYKVEYPKT EEMRGRSYTF TIKQVNVLKL GDLKEYMTGR SSFNPRDVLQ
0301: GMDVVMKEHP SKCMITVGKS FFTRETEPDE DFRFGVIAAK GYRHTLKPTA QGLSLCLDYS VLAFRKAMSV IEYLKLYFNW SDMRQFRRRD VEEELIGLKV
0401: TVNHRKNKQK LTIVGLSMQN TKDIKFDLID QEGNEPPRKT SIVEYFRIKY GRHIVHKDIP CLDLGKNGRQ NFVPMEFCDL VEGQIYPKDN LDKDSALWLK
0501: KLSLVNPQQR QRNIDKMIKA RNGPSGGEII GNFGLKVDTN MTPVEGRVLK APSLKLAERG RVVREEPNPR QNNQWNLMKK GVTRGSIVKH WAVLDFTASE
0601: RFNKMPNDFV DNLIDRCWRL GMQMEAPIVY KTSRMETLSN GNAIEELLRS VIDEASRKHG GARPTLVLCA MSRKDDGYKT LKWIAETKLG LVTQCFLTGP
0701: ATKGGDQYRA NLALKMNAKV GGSNVELMDT FSFFKKEDEV MFIGADVNHP AARDKMSPSI VAVVGTLNWP EANRYAARVI AQPHRKEEIQ GFGDACLELV
0801: KAHVQATGKR PNKIVIFRDG VSDAQFDMVL NVELLDVKLT FEKNGYNPKI TVIVAQKRHQ TRFFPATNND GSDKGNVPSG TVVDTKVIHP YEYDFYLCSH
0901: HGGIGTSKPT HYYTLWDELG FTSDQVQKLI FEMCFTFTRC TKPVSLVPPV YYADMVAFRG RMYHEASSRE KNFKQPRGAS TSAASLASSL SSLTIEDKAI
1001: FKLHAELENV MFFV

Arabidopsis Description

AGO2Protein argonaute 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.